Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 8.1e-163 577.0 293 100.0
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 1.2e-49 201.1 140 76.4
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 1.2e-49 201.1 142 76.1
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 1.2e-49 201.1 140 77.1
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 2.7e-49 199.9 140 76.4
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 2.7e-49 199.9 140 76.4
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 2.7e-49 199.9 140 76.4
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 4.6e-49 199.1 140 76.4
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 4.6e-49 199.1 140 76.4
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 7.8e-49 198.4 141 78.0
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 1.3e-48 197.6 140 76.4
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 3.0e-48 196.4 143 74.1
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 3.9e-48 196.1 140 76.4
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 5.1e-48 195.7 140 75.7
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 5.1e-48 195.7 140 76.4
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.5e-47 194.1 140 75.0
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.9e-47 193.7 140 74.3
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.9e-47 193.7 140 74.3
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 3.3e-47 193.0 138 76.8
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 4.3e-47 192.6 138 76.1
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 4.3e-47 192.6 147 73.5
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 1.6e-46 190.7 139 74.1
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 1.6e-46 190.7 140 72.9
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 2.8e-46 189.9 140 75.0
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 3.6e-46 189.5 140 71.4
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 4.8e-46 189.1 140 72.9
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 6.2e-46 188.7 140 71.4
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 8.1e-46 188.3 141 73.8
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 8.1e-46 188.3 142 72.5
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 8.1e-46 188.3 138 74.6
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 1.4e-45 187.6 140 71.4
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 1.8e-45 187.2 139 72.7
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 2.4e-45 186.8 139 71.9
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 2.4e-45 186.8 139 73.4
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 2.4e-45 186.8 142 72.5
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 3.1e-45 186.4 139 71.9
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 5.3e-45 185.7 140 72.1
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 5.3e-45 185.7 139 72.7
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 5.3e-45 185.7 139 72.7
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 6.9e-45 185.3 141 72.3
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 9.0e-45 184.9 139 71.2
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 1.2e-44 184.5 140 72.9
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 1.5e-44 184.1 140 70.7
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 2.0e-44 183.7 139 74.8
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 2.6e-44 183.3 140 70.0
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 4.5e-44 182.6 139 70.5
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 4.5e-44 182.6 139 71.2
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 4.5e-44 182.6 139 71.2
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 4.5e-44 182.6 139 70.5
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 4.5e-44 182.6 140 70.7
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 4.5e-44 182.6 139 69.8
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 5.8e-44 182.2 139 73.4
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 7.6e-44 181.8 139 71.2
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 7.6e-44 181.8 143 72.7
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.3e-43 181.0 139 72.7
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 2.2e-43 180.3 139 70.5
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 2.9e-43 179.9 139 69.1
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 2.9e-43 179.9 139 69.1
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 2.9e-43 179.9 142 71.1
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 3.8e-43 179.5 141 70.9
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 4.9e-43 179.1 140 69.3
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 4.9e-43 179.1 140 74.3
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 4.9e-43 179.1 139 70.5
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 6.4e-43 178.7 141 70.9
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 8.4e-43 178.3 139 70.5
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 1.4e-42 177.6 140 68.6
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 1.9e-42 177.2 139 68.3
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 2.4e-42 176.8 138 68.8
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 2.4e-42 176.8 140 65.7
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 5.4e-42 175.6 139 68.3
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 7.1e-42 175.3 139 67.6
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 9.3e-42 174.9 136 70.6
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 1.6e-41 174.1 138 68.8
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.1e-41 173.7 138 68.8
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 4.6e-41 172.6 139 66.9
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 4.6e-41 172.6 139 69.8
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 4.6e-41 172.6 139 66.2
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 6.0e-41 172.2 142 65.5
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 6.0e-41 172.2 142 66.9
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 7.9e-41 171.8 137 67.9
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 7.9e-41 171.8 139 66.2
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 1.3e-40 171.0 141 66.7
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 1.8e-40 170.6 138 68.1
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.8e-40 170.6 138 68.1
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 3.0e-40 169.9 139 65.5
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 3.0e-40 169.9 138 67.4
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 3.9e-40 169.5 178 57.9
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 6.7e-40 168.7 140 67.9
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 6.7e-40 168.7 139 65.5
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 6.7e-40 168.7 143 64.3
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 1.5e-39 167.5 141 66.0
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 2.5e-39 166.8 119 74.8
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 4.3e-39 166.0 141 66.7
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 4.3e-39 166.0 137 65.0
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 2.1e-38 163.7 119 73.1
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 2.8e-38 163.3 140 60.7
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 2.8e-38 163.3 140 60.7
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 3.7e-38 162.9 138 63.8
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 4.8e-38 162.5 139 61.2
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 6.2e-38 162.2 139 65.5
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 8.1e-38 161.8 140 64.3
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 8.1e-38 161.8 139 63.3
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 1.4e-37 161.0 146 62.3
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 1.8e-37 160.6 141 63.1
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 1.8e-37 160.6 139 61.9
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 3.1e-37 159.8 168 58.9
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 3.1e-37 159.8 137 63.5
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 5.3e-37 159.1 142 62.0
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 5.3e-37 159.1 116 70.7
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 1.2e-36 157.9 157 58.0
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 2.0e-36 157.1 124 66.9
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 2.0e-36 157.1 130 64.6
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 3.4e-36 156.4 139 60.4
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 3.4e-36 156.4 139 60.4
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 3.4e-36 156.4 114 70.2
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 4.5e-36 156.0 131 62.6
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 4.5e-36 156.0 130 64.6
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 1.7e-35 154.1 138 62.3
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 2.9e-35 153.3 183 50.8
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 2.9e-35 153.3 112 69.6
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 3.8e-35 152.9 105 75.2
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 6.5e-35 152.1 140 63.6
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 1.1e-34 151.4 126 65.9
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 2.1e-33 147.1 119 67.2
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 7.9e-33 145.2 103 74.8
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.0e-32 144.8 120 62.5
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 3.0e-32 143.3 120 61.7
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 3.0e-32 143.3 124 62.1
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.1e-31 141.4 129 58.1
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 5.7e-31 139.0 124 59.7
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 1.3e-30 137.9 78 89.7
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 1.6e-30 137.5 124 56.5
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 3.7e-30 136.3 102 69.6
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 6.2e-30 135.6 79 89.9
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 1.4e-29 134.4 125 56.0
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 1.4e-29 134.4 91 76.9
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 1.5e-28 131.0 122 57.4
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 2.6e-28 130.2 116 58.6
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 3.4e-28 129.8 111 64.9
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 5.8e-28 129.0 93 73.1
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 1.7e-27 127.5 139 56.1
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 8.4e-27 125.2 106 65.1
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 1.1e-26 124.8 139 56.1
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.1e-25 120.6 105 61.0
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 8.7e-24 115.2 69 81.2
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 4.3e-23 112.8 71 76.1
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 4.3e-23 112.8 77 74.0
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 3.1e-21 106.7 106 54.7
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 6.9e-21 105.5 56 91.1
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.0e-20 104.0 78 67.9
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 2.2e-19 100.5 120 45.0
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 1.1e-18 98.2 68 76.5
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 7.9e-17 92.0 139 44.6
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 1.4e-13 81.3 104 43.3
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 6.9e-13 79.0 119 36.1
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 6.5e-11 72.4 125 39.2
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 3.0e-08 63.5 48 64.6
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.1e-08 62.8 34 88.2
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 3.3e-07 60.1 34 79.4
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 2.2e-06 57.4 108 33.3


User provided reference genes

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