Gene: Solyc06g036200.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g036200.2
  • Transcript Identifier Solyc06g036200.2.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 23528234-23529653 : negative

Gene Family Information

  • ID HOM05D004786
  • #Genes/#Species 154/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g036200.2.1
  • uniprot A0A3Q7GQJ8
  • gene_id Solyc06g036200

Descriptions

  • Description Transcription initiation factor TFIID subunit 13 (AHRD V3.3 *** A0A2G3D630_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006366
IBA
IEA
GOA Databasetranscription by RNA polymerase II
GO:0006366
IEA
InterProtranscription by RNA polymerase II
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G02680
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT1G02680
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT1G02680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
ISO
PLAZA Homology (enrichment)protein heterodimerization activity HOM05D004786

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003195 Transcription initiation factor IID, subunit 13
Mapman id Description
15.3.4.2.8 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component SPT3/TAF13
15.3.4.3.3.5 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.component SPT3/TAF13