Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22645 Utricularia gibba HOM05D003684 ORTHO05D004428 0.0e+00 1512.7 771 100.0
unitig_899.g14642 Utricularia gibba HOM05D003684 ORTHO05D004428 0.0e+00 1129.4 773 76.3
Migut.M00001 Erythranthe guttata HOM05D003684 ORTHO05D004428 2.5e-251 872.5 823 59.2
Oeu063702.1 Olea europaea HOM05D003684 ORTHO05D004428 8.2e-247 857.4 825 57.0
SGA_v2.0_scaffold12G06270 Striga asiatica HOM05D003684 ORTHO05D004428 5.0e-244 848.2 831 57.4
MSTRG.23231 Avicennia marina HOM05D003684 ORTHO05D004428 2.1e-242 842.8 818 57.9
Solyc05g056340.3 Solanum lycopersicum HOM05D003684 ORTHO05D004428 7.7e-221 771.2 818 53.4
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 1.6e-218 763.5 806 52.7
Sopen05g034730 Solanum pennellii HOM05D003684 ORTHO05D004428 4.7e-218 761.9 818 52.9
RcHm_v2.0_Chr3g0485021 Rosa chinensis HOM05D003684 ORTHO05D004428 6.8e-217 758.1 802 53.5
Cfa020930 Carpinus fangiana HOM05D003684 ORTHO05D004428 1.3e-215 753.8 804 53.1
PGR119G1631 Punica granatum HOM05D003684 ORTHO05D004428 1.7e-215 753.4 804 52.7
CsaV3_2G019660 Cucumis sativus L. HOM05D003684 ORTHO05D004428 2.2e-215 753.1 802 53.0
CiPaw.16G119400 Carya illinoinensis HOM05D003684 ORTHO05D004428 2.8e-215 752.7 802 54.0
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 7.0e-214 748.0 810 52.2
Gorai.002G106900 Gossypium raimondii HOM05D003684 ORTHO05D004428 2.3e-212 743.0 815 52.3
Lj5g0014818 Lotus japonicus HOM05D003684 ORTHO05D004428 2.3e-212 743.0 810 52.1
Sed0026164 Sechium edule HOM05D003684 ORTHO05D004428 2.3e-212 743.0 802 53.7
Manes.13G154400 Manihot esculenta HOM05D003684 ORTHO05D004428 6.5e-212 741.5 808 53.2
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 8.6e-212 741.1 811 52.3
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 4.2e-211 738.8 791 52.2
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 7.2e-211 738.0 798 52.0
CAN.G1156.25 Capsicum annuum HOM05D003684 ORTHO05D004428 2.1e-210 736.5 865 49.4
FvH4_1g25880 Fragaria vesca HOM05D003684 ORTHO05D004428 1.8e-209 733.4 797 51.7
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 2.6e-208 729.6 769 52.4
Glyma.10G175900 Glycine max HOM05D003684 ORTHO05D004428 3.4e-208 729.2 816 51.5
Potri.T044700 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.4e-208 729.2 801 51.4
Phvul.004G132300 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 7.5e-208 728.0 800 52.6
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 9.8e-208 727.6 801 51.6
Ciclev10024915m.g Citrus clementina HOM05D003684 ORTHO05D004428 8.3e-207 724.5 799 51.8
Atru.chr3.1442 Acer truncatum HOM05D003684 ORTHO05D004428 1.1e-206 724.2 800 51.2
EL10Ac4g09714 Beta vulgaris HOM05D003684 ORTHO05D004428 1.1e-206 724.2 723 56.6
Peaxi162Scf00819g00027 Petunia axillaris HOM05D003684 ORTHO05D004428 1.1e-206 724.2 813 53.1
FAN28G1615 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.8e-206 723.4 797 51.4
Dinv26831 Davidia involucrata HOM05D003684 ORTHO05D004428 2.4e-206 723.0 792 52.7
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 5.4e-206 721.8 817 51.4
Phvul.007G114500 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 7.0e-206 721.5 817 51.3
Gohir.D01G081800 Gossypium hirsutum HOM05D003684 ORTHO05D004428 1.0e-204 717.6 614 61.1
Lalb_Chr06g0168741 Lupinus albus HOM05D003684 ORTHO05D004428 1.0e-204 717.6 806 52.5
VMungo0720G1706 Vigna mungo HOM05D003684 ORTHO05D004428 1.0e-204 717.6 807 51.8
arahy.Tifrunner.gnm1.ann1.88FPG1 Arachis hypogaea HOM05D003684 ORTHO05D004428 6.6e-204 714.9 812 51.1
FAN19G3168 Fragaria x ananassa HOM05D003684 ORTHO05D004428 3.3e-203 712.6 793 50.9
TWI31G1361 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 3.3e-203 712.6 801 52.2
AUR62000586 Chenopodium quinoa HOM05D003684 ORTHO05D004428 7.3e-203 711.4 791 51.2
arahy.Tifrunner.gnm1.ann1.554WMS Arachis hypogaea HOM05D003684 ORTHO05D004428 9.5e-203 711.1 812 50.9
FAN26G1029 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.6e-202 710.3 789 51.0
Aqoxy5G02639 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 2.1e-202 709.9 758 53.8
Glyma.09G157300 Glycine max HOM05D003684 ORTHO05D004428 2.8e-202 709.5 801 52.2
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 1.8e-201 706.8 817 50.1
Glyma.20G214600 Glycine max HOM05D003684 ORTHO05D004428 4.9e-199 698.7 814 50.1
Gohir.A01G097200 Gossypium hirsutum HOM05D003684 ORTHO05D004428 4.1e-198 695.7 802 50.7
Glyma.16G207900 Glycine max HOM05D003684 ORTHO05D004428 1.3e-196 690.6 800 50.9
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 1.3e-196 690.6 827 49.7
FAN23G1204 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.7e-196 690.3 797 50.1
Actinidia19941 Actinidia chinensis HOM05D003684 ORTHO05D004428 2.3e-196 689.9 745 52.5
CANSAT54G1806 Cannabis sativa HOM05D003684 ORTHO05D004428 3.3e-195 686.0 675 57.8
MD15G1140800 Malus domestica HOM05D003684 ORTHO05D004428 3.3e-195 686.0 827 48.6
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 7.3e-195 684.9 660 57.4
Lalb_Chr02g0149761 Lupinus albus HOM05D003684 ORTHO05D004428 2.1e-194 683.3 808 50.1
Ca_09907_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 1.4e-193 680.6 838 48.6
VMungo0464G0733 Vigna mungo HOM05D003684 ORTHO05D004428 4.0e-193 679.1 800 50.1
THA.LOC104800528 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 1.5e-192 677.2 777 51.6
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 7.5e-192 674.9 663 56.7
Hund21769 Selenicereus undatus HOM05D003684 ORTHO05D004428 3.7e-191 672.5 757 52.8
Medtr1g077090 Medicago truncatula HOM05D003684 ORTHO05D004428 2.4e-190 669.8 824 48.9
AL6G18920 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 1.2e-189 667.5 621 58.0
Lalb_Chr21g0311771 Lupinus albus HOM05D003684 ORTHO05D004428 3.5e-189 666.0 809 49.8
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 3.0e-188 662.9 659 56.8
arahy.Tifrunner.gnm1.ann1.XFQ1DZ Arachis hypogaea HOM05D003684 ORTHO05D004428 9.5e-187 657.9 811 49.2
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 2.8e-186 656.4 556 61.3
GSVIVG01000253001 Vitis vinifera HOM05D003684 ORTHO05D004428 1.4e-185 654.1 455 71.9
CiPaw.15G185900 Carya illinoinensis HOM05D003684 ORTHO05D004428 8.9e-185 651.4 541 61.7
AUR62006943 Chenopodium quinoa HOM05D003684 ORTHO05D004428 1.2e-184 651.0 755 49.8
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 4.4e-184 649.0 767 50.2
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 9.9e-184 647.9 665 54.6
TWI79G1581 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 1.3e-183 647.5 804 49.5
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 2.2e-183 646.7 661 55.8
Rhsim10G0125000 Rhododendron simsii HOM05D003684 ORTHO05D004428 1.0e-180 637.9 952 42.8
Peaxi162Scf00353g00740 Petunia axillaris HOM05D003684 ORTHO05D004428 1.7e-180 637.1 775 49.9
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 5.1e-180 635.6 602 57.5
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 1.5e-179 634.0 597 58.1
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 1.6e-178 630.6 609 56.7
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 2.8e-178 629.8 600 57.7
Nitab4.5_0000496g0270 Nicotiana tabacum HOM05D003684 ORTHO05D004428 1.1e-177 627.9 807 47.8
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 1.1e-177 627.9 794 46.7
Prupe.4G280600 Prunus persica HOM05D003684 ORTHO05D004428 1.4e-177 627.5 714 51.5
TPR.G16631 Trifolium pratense HOM05D003684 ORTHO05D004428 2.4e-177 626.7 558 59.7
Lj2g0008338 Lotus japonicus HOM05D003684 ORTHO05D004428 8.9e-177 624.8 794 47.4
DCAR_009623 Daucus carota HOM05D003684 ORTHO05D004428 1.2e-176 624.4 412 74.0
Medtr6g065070 Medicago truncatula HOM05D003684 ORTHO05D004428 2.2e-175 620.2 756 49.5
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 1.6e-173 614.0 649 54.7
HanXRQChr11g0336971 Helianthus annuus HOM05D003684 ORTHO05D004428 1.3e-172 610.9 742 49.6
Ca_25251_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 1.7e-172 610.5 824 45.9
CDE08G0027 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 8.1e-170 601.7 783 46.6
TPR.G40356 Trifolium pratense HOM05D003684 ORTHO05D004428 6.9e-169 598.6 795 45.9
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 2.6e-168 596.7 650 50.9
SalBow8G3946 Salvia bowleyana HOM05D003684 ORTHO05D004428 1.4e-166 590.9 404 73.3
ECA248G2431 Erigeron canadensis HOM05D003684 ORTHO05D004428 7.1e-166 588.6 814 45.9
HPP92_003712 Vanilla planifolia HOM05D003684 ORTHO05D004428 2.7e-165 586.6 786 44.4
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 4.6e-165 585.9 799 46.2
ClCG02G000160 Citrullus lanatus HOM05D003684 ORTHO05D004428 3.0e-164 583.2 794 46.0
PSO170G2972 Papaver somniferum HOM05D003684 ORTHO05D004428 7.3e-163 578.6 754 46.2
PSO782G3749 Papaver somniferum HOM05D003684 ORTHO05D004428 3.6e-162 576.2 754 46.0
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 6.2e-162 575.5 803 44.6
Nitab4.5_0006957g0020 Nicotiana tabacum HOM05D003684 ORTHO05D004428 5.3e-161 572.4 794 45.3
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 7.6e-160 568.5 364 75.0
vmacro12735 Vaccinium macrocarpon HOM05D003684 ORTHO05D004428 1.5e-155 554.3 1006 38.0
Psat0s3859g0040 Pisum sativum HOM05D003684 ORTHO05D004428 1.4e-153 547.7 626 49.7
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 2.4e-153 547.0 359 73.0
Sc09g0001960 Simmondsia chinensis HOM05D003684 ORTHO05D004428 5.3e-153 545.8 343 75.2
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 5.5e-150 535.8 357 72.3
BcaB08g37259 Brassica carinata HOM05D003684 ORTHO05D004428 5.6e-147 525.8 448 60.5
Cc07_g19760 Coffea canephora HOM05D003684 ORTHO05D004428 9.6e-147 525.0 343 73.2
MSTRG.2470 Avicennia marina HOM05D003684 ORTHO05D004428 7.1e-142 508.8 611 49.6
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 7.1e-142 508.8 354 69.2
C09p68560 Brassica napus HOM05D003684 ORTHO05D004428 1.0e-140 505.0 376 66.2
Oeu034404.1 Olea europaea HOM05D003684 ORTHO05D004428 1.3e-140 504.6 299 81.9
AL6G19100 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 2.9e-135 486.9 828 39.9
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 1.4e-134 484.6 352 65.1
DCAR_019948 Daucus carota HOM05D003684 ORTHO05D004428 2.7e-133 480.3 383 61.4
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 3.0e-132 476.9 407 60.7
Actinidia36575 Actinidia chinensis HOM05D003684 ORTHO05D004428 1.1e-131 474.9 412 60.9
Sc06g0005260 Simmondsia chinensis HOM05D003684 ORTHO05D004428 2.8e-130 470.3 516 50.2
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 5.1e-124 449.5 360 65.0
Lj2C616G3 Lonicera japonica HOM05D003684 ORTHO05D004428 1.8e-121 441.0 319 68.3
Pp3c3_32800 Physcomitrium patens HOM05D003684 ORTHO05D004428 1.7e-119 434.5 436 52.3
Potri.T044400 Populus trichocarpa HOM05D003684 ORTHO05D004428 6.5e-119 432.6 615 45.0
SMO356G0426 Selaginella moellendorffii HOM05D003684 ORTHO05D004428 2.1e-117 427.6 425 53.2
SHI11408 Sapria himalayana HOM05D003684 ORTHO05D004428 1.0e-116 425.2 765 38.7
Pp3c8_5360 Physcomitrium patens HOM05D003684 ORTHO05D004428 1.7e-114 417.9 440 50.0
MBI03_g18673_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 5.9e-112 409.5 278 71.2
HPP92_007640 Vanilla planifolia HOM05D003684 ORTHO05D004428 1.0e-111 408.7 580 42.2
Pp3c3_30960 Physcomitrium patens HOM05D003684 ORTHO05D004428 4.0e-108 396.7 435 49.0
Mapoly0050s0019 Marchantia polymorpha HOM05D003684 ORTHO05D004428 1.1e-105 388.7 505 45.0
Nn1g08436 Nelumbo nucifera HOM05D003684 ORTHO05D004428 9.1e-105 385.6 646 42.1
AagrBONN_evm.TU.Sc2ySwM_228.5259 Anthoceros agrestis HOM05D003684 ORTHO05D004428 4.2e-102 376.7 443 47.4
SGA_v2.0_scaffold51G18855 Striga asiatica HOM05D003684 ORTHO05D004428 3.0e-100 370.5 378 53.2
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.3e-95 355.1 241 73.9
HPP92_003711 Vanilla planifolia HOM05D003684 ORTHO05D004428 2.3e-95 354.4 619 38.9
MSTRG.2469 Avicennia marina HOM05D003684 ORTHO05D004428 2.3e-84 317.8 195 79.5
CBR_g645 Chara braunii HOM05D003684 ORTHO05D004428 2.9e-74 284.3 317 46.7
CSS0049380 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 1.9e-73 281.6 269 56.5
Ciclev10026566m.g Citrus clementina HOM05D003684 ORTHO05D004428 7.0e-73 279.6 190 72.1
CDE02G3206 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 3.5e-72 277.3 571 35.6
Oeu034403.1 Olea europaea HOM05D003684 ORTHO05D004428 3.6e-69 267.3 433 40.6
CDE02G3840 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 3.0e-63 247.7 183 65.0
MCO05G109 Micromonas commoda HOM05D003684 ORTHO05D004428 1.9e-62 245.0 330 40.9
Cre03.g182600 Chlamydomonas reinhardtii HOM05D003684 ORTHO05D004428 7.3e-62 243.0 310 41.6
Cc07_g19750 Coffea canephora HOM05D003684 ORTHO05D004428 5.4e-57 226.9 184 63.6
HanXRQChr01g0009441 Helianthus annuus HOM05D003684 ORTHO05D004428 3.0e-55 221.1 186 59.7
PGSC0003DMG400023330 Solanum tuberosum HOM05D003684 ORTHO05D004428 1.8e-52 211.8 459 35.5
MBI01_g42406_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 5.8e-51 206.8 152 64.5
Cc07_g19740 Coffea canephora HOM05D003684 ORTHO05D004428 1.5e-46 192.2 148 63.5
Aqoxy391s001 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 2.1e-45 188.3 101 87.1
Haze_19362 Corylus avellana HOM05D003684 ORTHO05D004428 3.6e-45 187.6 447 33.6
Mapoly0024s0027 Marchantia polymorpha HOM05D003684 ORTHO05D004428 6.2e-45 186.8 463 31.7
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 4.0e-44 184.1 325 35.7
MELO3C023205.2 Cucumis melo HOM05D003684 ORTHO05D004428 6.9e-44 183.3 442 33.3
Lj2C616T2 Lonicera japonica HOM05D003684 ORTHO05D004428 1.7e-42 178.7 566 31.3
Cpa.g.sc138.51 Carica papaya HOM05D003684 ORTHO05D004428 7.4e-38 163.3 361 34.6
CSS0015943 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 9.6e-38 162.9 477 29.8
Cc00_g24540 Coffea canephora HOM05D003684 ORTHO05D004428 4.0e-36 157.5 99 71.7
Sabra19G0011700 Salix brachista HOM05D003684 ORTHO05D004428 1.4e-33 149.1 448 31.9
DCAR_009622 Daucus carota HOM05D003684 ORTHO05D004428 5.3e-28 130.6 421 29.9
Potri.018G145542 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.9e-25 122.1 327 31.5
Sc09g0001970 Simmondsia chinensis HOM05D003684 ORTHO05D004428 3.5e-24 117.9 443 28.4
ATR1136G068 Amborella trichopoda HOM05D003684 ORTHO05D004428 3.9e-23 114.4 406 28.8
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 8.7e-23 113.2 127 52.0
Lsat_1_v5_gn_6_89680 Lactuca sativa HOM05D003684 ORTHO05D004428 1.3e-21 109.4 216 36.6
HanXRQChr17g0567611 Helianthus annuus HOM05D003684 ORTHO05D004428 8.2e-21 106.7 63 77.8
Sabra01G0044800 Salix brachista HOM05D003684 ORTHO05D004428 1.8e-20 105.5 65 76.9
CSS0003103 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 5.9e-19 100.5 66 75.8
SEGI_34739 Sequoiadendron giganteum HOM05D003684 ORTHO05D004428 5.9e-19 100.5 65 72.3
CSS0033146 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 8.8e-15 86.7 59 69.5
Ciclev10003442m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.2e-10 72.0 50 68.0
arahy.Tifrunner.gnm1.ann1.32AA53 Arachis hypogaea HOM05D003684 ORTHO05D001254 6.5e-10 70.5 52 65.4
EL10Ac2g03383 Beta vulgaris HOM05D000039 ORTHO05D001729 6.5e-10 70.5 58 62.1
EL10Ac9g22716 Beta vulgaris HOM05D003684 ORTHO05D004428 3.2e-09 68.2 47 66.0
Potri.018G145552 Populus trichocarpa HOM05D003684 ORTHO05D004428 7.9e-08 63.5 51 68.6
Ciclev10003579m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.0e-07 63.2 56 60.7
HanXRQChr11g0344511 Helianthus annuus HOM05D003684 ORTHO05D004428 9.7e-06 56.6 33 63.6


User provided reference genes

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