Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.8e-273 945.3 473 100.0
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 8.4e-101 371.7 472 46.2
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 1.9e-84 317.4 468 42.5
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 2.4e-84 317.0 458 42.8
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 2.3e-82 310.5 465 41.3
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 9.6e-81 305.1 463 41.3
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 1.7e-77 294.3 440 41.4
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 2.9e-77 293.5 467 40.0
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 3.8e-77 293.1 465 39.8
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 3.5e-75 286.6 482 38.6
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 7.9e-75 285.4 462 38.5
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 6.7e-74 282.3 470 38.7
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 8.7e-74 282.0 466 38.6
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.1e-71 275.0 486 38.5
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 3.1e-71 273.5 469 37.7
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 4.0e-71 273.1 467 39.4
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 9.0e-71 271.9 453 39.1
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 2.6e-70 270.4 460 38.0
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 5.8e-70 269.2 462 37.2
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 1.0e-69 268.5 489 36.2
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 2.2e-69 267.3 457 38.1
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 6.5e-69 265.8 468 36.8
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 7.1e-68 262.3 436 37.6
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 7.1e-68 262.3 466 38.0
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 7.1e-68 262.3 459 37.9
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.2e-67 261.5 472 36.0
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 1.2e-67 261.5 449 36.7
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 3.5e-67 260.0 459 37.5
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.9e-66 256.5 428 38.6
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 5.1e-66 256.1 469 36.7
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 5.1e-66 256.1 493 36.1
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 6.7e-66 255.8 464 36.4
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 6.7e-66 255.8 417 39.8
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 8.7e-66 255.4 462 36.8
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 8.7e-66 255.4 456 36.6
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 9.7e-65 251.9 404 38.9
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.2e-64 250.8 470 36.4
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.8e-64 250.4 445 38.9
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 2.8e-64 250.4 447 35.8
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 2.8e-64 250.4 405 39.3
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 6.3e-64 249.2 467 34.7
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 1.8e-63 247.7 469 36.0
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.1e-63 246.9 469 35.6
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 3.1e-63 246.9 463 35.4
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 4.1e-63 246.5 458 36.7
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 6.9e-63 245.7 443 37.5
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 9.0e-63 245.4 459 35.3
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.2e-62 245.0 456 36.2
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 4.5e-62 243.0 458 36.5
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 5.9e-62 242.7 461 37.1
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 1.0e-61 241.9 435 36.3
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 3.8e-61 240.0 455 36.3
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 9.4e-60 235.3 474 35.0
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 1.0e-58 231.9 448 34.2
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 1.0e-58 231.9 450 35.1
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 1.0e-58 231.9 432 35.0
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 2.3e-58 230.7 428 36.0
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 3.0e-58 230.3 446 35.0
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.9e-58 229.9 441 35.6
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 5.1e-58 229.6 436 35.6
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 6.7e-58 229.2 452 35.4
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 1.7e-56 224.6 448 34.6
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 2.2e-56 224.2 433 35.1
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 6.3e-56 222.6 432 35.0
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 6.3e-56 222.6 432 35.2
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 8.2e-56 222.2 455 34.5
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.1e-55 221.9 468 34.0
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.4e-55 221.5 432 35.0
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 1.8e-55 221.1 432 34.7
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 5.3e-55 219.5 460 34.8
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.0e-54 217.6 465 32.3
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 2.6e-54 217.2 478 34.7
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 3.4e-54 216.9 468 34.8
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.0e-53 215.3 468 36.1
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.1e-52 211.8 457 33.0
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.9e-52 211.1 472 32.0
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 3.2e-52 210.3 425 35.5
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 5.5e-52 209.5 478 31.8
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 5.5e-52 209.5 461 32.5
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 9.4e-52 208.8 460 32.6
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.6e-51 208.0 463 35.6
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 1.6e-51 208.0 464 32.8
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 3.6e-51 206.8 456 32.5
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 5.1e-50 203.0 407 36.1
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.5e-49 201.4 468 33.3
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.3e-49 200.3 402 33.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 3.3e-49 200.3 429 34.3
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 3.3e-49 200.3 447 34.5
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 7.4e-49 199.1 439 30.8
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 1.3e-48 198.4 338 37.9
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 3.7e-48 196.8 436 34.2
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 4.8e-48 196.4 339 37.5
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.5e-46 191.4 352 38.4
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 8.5e-45 185.7 423 33.1
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 7.4e-41 172.6 298 37.6
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.1e-35 154.5 325 34.2
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.4e-34 151.8 323 33.1
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 2.0e-33 147.9 302 33.4
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 4.7e-27 126.7 182 40.1
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 9.8e-25 119.0 327 30.9
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 1.8e-18 98.2 154 37.7
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 3.0e-18 97.4 181 37.0
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.4e-15 88.6 119 42.0
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-14 85.5 119 41.2
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-14 85.5 119 41.2
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 3.5e-14 84.0 160 31.9
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 3.5e-14 84.0 160 31.9
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 2.1e-11 74.7 70 52.9
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 6.1e-11 73.2 81 44.4
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-09 68.9 118 37.3
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.4e-09 67.0 127 37.8
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 9.8e-09 65.9 114 34.2
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 3.7e-08 63.9 192 31.8
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 8.3e-08 62.8 75 44.0
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 2.7e-06 57.8 94 34.0
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 4.6e-06 57.0 135 32.6


User provided reference genes

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