Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 5.7e-189 664.1 333 100.0
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 8.7e-129 464.2 330 70.3
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 1.3e-121 440.3 330 67.9
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 2.3e-121 439.5 333 67.0
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 5.1e-121 438.3 333 65.8
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 8.2e-119 431.0 334 65.9
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 1.1e-118 430.6 294 72.8
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 3.1e-118 429.1 331 65.9
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 5.3e-118 428.3 332 65.1
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 6.9e-118 427.9 314 67.8
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 1.2e-117 427.2 312 68.6
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 2.6e-117 426.0 331 65.3
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 1.0e-116 424.1 337 64.1
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 1.0e-116 424.1 302 69.5
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 1.7e-116 423.3 331 64.7
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 2.9e-116 422.5 336 64.9
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 2.9e-116 422.5 337 64.7
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 8.5e-116 421.0 319 66.5
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 8.5e-116 421.0 328 65.9
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.1e-115 420.6 337 64.7
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 1.4e-115 420.2 329 65.0
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 3.2e-115 419.1 337 64.4
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 5.5e-115 418.3 324 65.1
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 5.5e-115 418.3 334 63.5
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 5.5e-115 418.3 331 64.7
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 5.5e-115 418.3 339 62.5
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 7.2e-115 417.9 311 67.2
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 1.2e-114 417.2 311 66.9
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 1.2e-114 417.2 331 64.4
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 2.1e-114 416.4 336 64.6
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 6.1e-114 414.8 311 66.9
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 1.8e-113 413.3 321 64.5
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 2.3e-113 412.9 334 63.2
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 3.0e-113 412.5 327 63.3
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 3.9e-113 412.1 288 72.2
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 3.9e-113 412.1 333 62.8
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 3.9e-113 412.1 332 63.6
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 5.1e-113 411.8 295 68.5
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 1.5e-112 410.2 332 61.4
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 2.5e-112 409.5 316 65.8
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 2.5e-112 409.5 330 63.0
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 2.5e-112 409.5 329 64.4
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 2.5e-112 409.5 329 62.3
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 3.3e-112 409.1 298 68.1
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 3.3e-112 409.1 329 63.2
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 4.3e-112 408.7 326 63.8
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 6.3e-111 404.8 318 64.2
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 8.2e-111 404.4 334 61.7
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 8.2e-111 404.4 324 63.3
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 4.1e-110 402.1 338 60.1
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 5.3e-110 401.7 314 64.3
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 6.9e-110 401.4 321 63.2
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 9.1e-110 401.0 310 65.2
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 1.5e-109 400.2 329 62.0
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 3.4e-109 399.1 350 60.0
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 4.5e-109 398.7 334 62.0
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 5.9e-109 398.3 290 69.0
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 7.7e-109 397.9 305 66.9
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 7.7e-109 397.9 310 63.5
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 1.0e-108 397.5 305 66.9
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 1.0e-108 397.5 315 63.8
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 1.0e-108 397.5 334 60.5
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 2.2e-108 396.4 331 61.9
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 2.9e-108 396.0 329 61.7
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 2.9e-108 396.0 303 65.0
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 2.9e-108 396.0 255 74.9
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 3.8e-108 395.6 323 61.9
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 3.8e-108 395.6 312 64.4
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 3.8e-108 395.6 329 62.3
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 8.5e-108 394.4 323 61.6
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 8.5e-108 394.4 323 61.6
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 8.5e-108 394.4 323 61.6
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 8.5e-108 394.4 289 66.8
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 1.1e-107 394.0 323 61.6
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 1.1e-107 394.0 332 61.7
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 2.5e-107 392.9 330 62.1
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 5.5e-107 391.7 306 64.1
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 7.2e-107 391.3 254 72.8
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 1.2e-106 390.6 331 61.0
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 2.1e-106 389.8 351 57.5
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 2.7e-106 389.4 340 59.4
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 1.0e-105 387.5 305 63.0
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 1.4e-105 387.1 337 60.2
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 3.0e-105 386.0 345 59.4
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 8.8e-105 384.4 245 74.3
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 1.1e-104 384.0 241 75.5
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.5e-104 383.6 313 62.3
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 5.7e-104 381.7 232 78.4
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 2.8e-103 379.4 317 61.5
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.4e-102 377.1 217 82.5
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 7.0e-102 374.8 253 70.4
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 9.1e-102 374.4 235 72.8
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 1.0e-100 370.9 299 62.9
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.8e-97 360.1 231 73.2
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 3.1e-94 349.4 320 56.9
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 1.2e-93 347.4 307 58.0
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 7.2e-91 338.2 298 59.1
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 1.2e-90 337.4 233 67.0
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 4.7e-90 335.5 327 54.1
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 5.7e-88 328.6 288 60.4
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 9.7e-88 327.8 335 53.1
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 1.4e-81 307.4 287 53.3
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.2e-80 304.3 183 78.7
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.2e-80 304.3 183 78.7
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 9.8e-72 274.6 197 69.5
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 4.5e-69 265.8 215 60.0
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 6.1e-66 255.4 189 64.0
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 1.4e-65 254.2 212 60.8
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 5.2e-57 225.7 201 56.2
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 5.2e-57 225.7 145 76.6
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 1.4e-41 174.5 167 50.3
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 3.5e-29 133.3 77 79.2
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 1.8e-20 104.4 144 42.4
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.8e-17 94.4 59 78.0
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 3.2e-14 83.6 129 38.8
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 1.2e-08 65.1 52 61.5
Mapoly0161s0027 Marchantia polymorpha HOM05D003204 ORTHO05D003566 1.5e-08 64.7 172 30.2
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 1.3e-07 61.6 170 30.0
Glyma.09G098900 Glycine max HOM05D003204 ORTHO05D003566 6.5e-07 59.3 168 31.5
BcaB08g36152 Brassica carinata HOM05D003204 ORTHO05D003566 1.1e-06 58.5 169 29.0
BcaB01g04554 Brassica carinata HOM05D003204 ORTHO05D003566 1.4e-06 58.2 169 29.0
C03p14580 Brassica napus HOM05D003204 ORTHO05D003566 1.4e-06 58.2 169 29.0
BolC3t13899H Brassica oleracea HOM05D003204 ORTHO05D003566 1.4e-06 58.2 169 29.0
MD15G1155500 Malus domestica HOM05D003204 ORTHO05D003566 1.4e-06 58.2 172 30.8
Sp6g19740 Schrenkiella parvula HOM05D003204 ORTHO05D003566 1.4e-06 58.2 166 30.7
BcaC04g19909 Brassica carinata HOM05D003204 ORTHO05D003566 3.2e-06 57.0 167 31.1
C09p49990 Brassica napus HOM05D003204 ORTHO05D003566 3.2e-06 57.0 167 31.1
BolC9t57852H Brassica oleracea HOM05D003204 ORTHO05D003566 3.2e-06 57.0 167 31.1
A03p12410 Brassica napus HOM05D003204 ORTHO05D003566 4.2e-06 56.6 169 28.4
BraA03t10555Z Brassica rapa HOM05D003204 ORTHO05D003566 4.2e-06 56.6 169 28.4
AUR62039740 Chenopodium quinoa HOM05D003204 ORTHO05D003566 4.2e-06 56.6 170 28.8
FvH4_1g01260 Fragaria vesca HOM05D003204 ORTHO05D003566 4.2e-06 56.6 170 30.6
Lalb_Chr07g0179701 Lupinus albus HOM05D003204 ORTHO05D003566 4.2e-06 56.6 170 30.0
Solyc12g010320.2 Solanum lycopersicum HOM05D003204 ORTHO05D003566 5.5e-06 56.2 171 30.4
Sopen12g005200 Solanum pennellii HOM05D003204 ORTHO05D003566 5.5e-06 56.2 171 30.4
Migut.K00344 Erythranthe guttata HOM05D003204 ORTHO05D003566 7.2e-06 55.8 167 30.5
Duzib168G0965 Durio zibethinus HOM05D003204 ORTHO05D003566 9.3e-06 55.5 171 29.2


User provided reference genes

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