Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16587 Utricularia gibba HOM05D004619 ORTHO05D005738 9.6e-141 503.4 246 100.0
SalBow1G6937 Salvia bowleyana HOM05D004619 ORTHO05D005738 7.9e-95 350.9 291 62.5
Migut.E01528 Erythranthe guttata HOM05D004619 ORTHO05D005738 3.1e-91 339.0 288 60.8
Dinv27905 Davidia involucrata HOM05D004619 ORTHO05D005738 1.3e-89 333.6 291 59.8
MSTRG.1660 Avicennia marina HOM05D004619 ORTHO05D005738 1.7e-89 333.2 291 59.8
COL.COLO4_20972 Corchorus olitorius HOM05D004619 ORTHO05D005738 1.7e-89 333.2 291 59.1
SGA_v2.0_scaffold169G38654 Striga asiatica HOM05D004619 ORTHO05D005738 8.5e-89 330.9 291 59.5
Nn8g39783 Nelumbo nucifera HOM05D004619 ORTHO05D005738 1.9e-88 329.7 291 57.7
DCAR_004468 Daucus carota HOM05D004619 ORTHO05D005738 3.2e-88 328.9 291 59.8
Thecc.09G045500 Theobroma cacao HOM05D004619 ORTHO05D005738 7.2e-88 327.8 291 58.4
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea HOM05D004619 ORTHO05D005738 1.2e-87 327.0 291 58.1
Gohir.D06G092300 Gossypium hirsutum HOM05D004619 ORTHO05D005738 1.6e-87 326.6 291 59.1
Gorai.010G106300 Gossypium raimondii HOM05D004619 ORTHO05D005738 1.6e-87 326.6 291 59.1
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea HOM05D004619 ORTHO05D005738 4.7e-87 325.1 291 57.7
Lj8A581G22 Lonicera japonica HOM05D004619 ORTHO05D005738 1.4e-86 323.6 291 58.4
Duzib168G0872 Durio zibethinus HOM05D004619 ORTHO05D005738 2.3e-86 322.8 291 57.7
Atru.chr7.2086 Acer truncatum HOM05D004619 ORTHO05D005738 4.0e-86 322.0 290 57.2
ECA233G0099 Erigeron canadensis HOM05D004619 ORTHO05D005738 4.0e-86 322.0 291 58.4
CSS0016966 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 6.7e-86 321.2 291 58.1
CSS0048446 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 6.7e-86 321.2 291 58.1
Sopen08g020420 Solanum pennellii HOM05D004619 ORTHO05D005738 6.7e-86 321.2 291 58.1
HanXRQChr13g0402061 Helianthus annuus HOM05D004619 ORTHO05D005738 8.8e-86 320.9 291 58.4
Glyma.17G193800 Glycine max HOM05D004619 ORTHO05D005738 1.1e-85 320.5 291 56.7
CAN.G400.8 Capsicum annuum HOM05D004619 ORTHO05D005738 1.5e-85 320.1 291 58.4
Ciclev10007610m.g Citrus clementina HOM05D004619 ORTHO05D005738 2.0e-85 319.7 290 56.2
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 2.0e-85 319.7 290 57.9
Actinidia15739 Actinidia chinensis HOM05D004619 ORTHO05D005738 2.6e-85 319.3 291 58.4
Prupe.1G448000 Prunus persica HOM05D004619 ORTHO05D005738 2.6e-85 319.3 291 56.4
Solyc08g066580.4 Solanum lycopersicum HOM05D004619 ORTHO05D005738 2.6e-85 319.3 291 57.7
Nitab4.5_0003794g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 4.4e-85 318.5 291 57.4
CANSAT25G1337 Cannabis sativa HOM05D004619 ORTHO05D005738 5.7e-85 318.2 291 57.7
Nitab4.5_0001515g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 7.5e-85 317.8 291 57.4
QL12p041325 Quercus lobata HOM05D004619 ORTHO05D005738 9.7e-85 317.4 290 57.6
TPR.G24498 Trifolium pratense HOM05D004619 ORTHO05D005738 9.7e-85 317.4 291 56.7
Lalb_Chr14g0362511 Lupinus albus HOM05D004619 ORTHO05D005738 1.3e-84 317.0 291 56.0
Ca_12754_v3 Cicer arietinum L. HOM05D004619 ORTHO05D005738 1.7e-84 316.6 291 56.4
Aqoxy7G03899 Aquilegia oxysepala HOM05D004619 ORTHO05D005738 2.8e-84 315.8 291 57.4
AUR62039705 Chenopodium quinoa HOM05D004619 ORTHO05D005738 2.8e-84 315.8 289 56.4
Cfa013367 Carpinus fangiana HOM05D004619 ORTHO05D005738 3.7e-84 315.5 290 57.2
MD15G1093200 Malus domestica HOM05D004619 ORTHO05D005738 6.3e-84 314.7 291 56.4
AUR62009276 Chenopodium quinoa HOM05D004619 ORTHO05D005738 8.2e-84 314.3 289 56.1
Medtr1g006690 Medicago truncatula HOM05D004619 ORTHO05D005738 1.4e-83 313.5 291 56.0
MBI01_g18389_MAGBIO Magnolia biondii HOM05D004619 ORTHO05D005738 2.4e-83 312.8 291 55.3
Cc08_g09590 Coffea canephora HOM05D004619 ORTHO05D005738 3.1e-83 312.4 291 57.4
GSVIVG01035621001 Vitis vinifera HOM05D004619 ORTHO05D005738 3.1e-83 312.4 291 56.4
FvH4_2g35520 Fragaria vesca HOM05D004619 ORTHO05D005738 4.1e-83 312.0 291 56.0
FAN27G0819 Fragaria x ananassa HOM05D004619 ORTHO05D005738 4.1e-83 312.0 291 56.0
PSO210G5473 Papaver somniferum HOM05D004619 ORTHO05D005738 4.1e-83 312.0 291 56.0
RcHm_v2.0_Chr6g0306261 Rosa chinensis HOM05D004619 ORTHO05D005738 9.1e-83 310.8 291 56.0
PGR031G0242 Punica granatum HOM05D004619 ORTHO05D005738 1.2e-82 310.5 291 56.7
Sabra18G0044200 Salix brachista HOM05D004619 ORTHO05D005738 2.0e-82 309.7 290 56.6
AT4G32910 Arabidopsis thaliana HOM05D004619 ORTHO05D005738 2.7e-82 309.3 290 55.9
PSO210G6185 Papaver somniferum HOM05D004619 ORTHO05D005738 2.7e-82 309.3 291 55.3
Sabra18G0044100 Salix brachista HOM05D004619 ORTHO05D005738 2.7e-82 309.3 290 56.6
Lj1g0001172 Lotus japonicus HOM05D004619 ORTHO05D005738 3.5e-82 308.9 291 56.0
Gohir.A06G092700 Gossypium hirsutum HOM05D004619 ORTHO05D005738 4.5e-82 308.5 291 57.4
Peaxi162Scf00227g00812 Petunia axillaris HOM05D004619 ORTHO05D005738 4.5e-82 308.5 289 56.4
THA.LOC104803757 Tarenaya hassleriana HOM05D004619 ORTHO05D005738 4.5e-82 308.5 292 55.5
EL10Ac2g04016 Beta vulgaris HOM05D004619 ORTHO05D005738 7.7e-82 307.8 289 55.0
CiPaw.07G204000 Carya illinoinensis HOM05D004619 ORTHO05D005738 1.0e-81 307.4 291 56.0
Eucgr.C00596 Eucalyptus grandis HOM05D004619 ORTHO05D005738 1.3e-81 307.0 291 55.7
CARHR240910 Cardamine hirsuta HOM05D004619 ORTHO05D005738 6.5e-81 304.7 290 54.8
AL7G18800 Arabidopsis lyrata HOM05D004619 ORTHO05D005738 8.5e-81 304.3 290 55.2
Haze_21890 Corylus avellana HOM05D004619 ORTHO05D005738 1.5e-80 303.5 290 56.6
Lsat_1_v5_gn_6_23120 Lactuca sativa HOM05D004619 ORTHO05D005738 1.5e-80 303.5 291 54.6
BolC1t00559H Brassica oleracea HOM05D004619 ORTHO05D005738 3.2e-80 302.4 290 53.8
Thhalv10024536m.g Eutrema salsugineum HOM05D004619 ORTHO05D005738 3.2e-80 302.4 290 54.5
Potri.018G044300 Populus trichocarpa HOM05D004619 ORTHO05D005738 3.2e-80 302.4 290 55.9
A01p05370 Brassica napus HOM05D004619 ORTHO05D005738 1.2e-79 300.4 290 53.4
Carub.0007s0758 Capsella rubella HOM05D004619 ORTHO05D005738 1.2e-79 300.4 290 54.1
BcaC09g52091 Brassica carinata HOM05D004619 ORTHO05D005738 2.7e-79 299.3 290 53.4
C01p05790 Brassica napus HOM05D004619 ORTHO05D005738 2.7e-79 299.3 290 53.4
FAN20G0141 Fragaria x ananassa HOM05D004619 ORTHO05D005738 3.6e-79 298.9 291 54.6
Sp7g30680 Schrenkiella parvula HOM05D004619 ORTHO05D005738 3.6e-79 298.9 290 54.1
CsaV3_2G030840 Cucumis sativus L. HOM05D004619 ORTHO05D005738 6.1e-79 298.1 290 54.5
BraA01t00511Z Brassica rapa HOM05D004619 ORTHO05D005738 8.0e-79 297.7 290 52.8
Sed0007447 Sechium edule HOM05D004619 ORTHO05D005738 8.0e-79 297.7 293 53.6
Aa31sc131G40 Aethionema arabicum HOM05D004619 ORTHO05D005738 1.0e-78 297.4 303 52.8
Sc23g0005210 Simmondsia chinensis HOM05D004619 ORTHO05D005738 1.0e-78 297.4 290 52.8
Os01g0746200 Oryza sativa ssp. japonica HOM05D004619 ORTHO05D005738 7.5e-77 291.2 290 52.4
Rhsim07G0146900 Rhododendron simsii HOM05D004619 ORTHO05D005738 1.3e-76 290.4 290 54.1
ATR0705G091 Amborella trichopoda HOM05D004619 ORTHO05D005738 3.7e-76 288.9 299 50.8
CDE02G4285 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 3.7e-76 288.9 291 53.3
SGA_v2.0_scaffold163G38073 Striga asiatica HOM05D004619 ORTHO05D005738 1.2e-74 283.9 254 58.3
vmacro05371 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 2.7e-74 282.7 349 47.6
HPP92_005572 Vanilla planifolia HOM05D004619 ORTHO05D005738 2.7e-74 282.7 291 51.2
Zm00001eb152980 Zea mays HOM05D004619 ORTHO05D005738 5.5e-72 275.0 290 49.3
ClCG08G012210 Citrullus lanatus HOM05D004619 ORTHO05D005738 6.1e-71 271.6 290 50.3
Cpa.g.sc2198.1 Carica papaya HOM05D004619 ORTHO05D005738 3.0e-70 269.2 223 61.9
Hund19512 Selenicereus undatus HOM05D004619 ORTHO05D005738 4.0e-70 268.9 332 44.0
Manes.16G075300 Manihot esculenta HOM05D004619 ORTHO05D005738 5.0e-65 251.9 279 49.8
MELO3C011139.2 Cucumis melo HOM05D004619 ORTHO05D005738 8.6e-65 251.1 290 47.6
Ah.10g035010 Amaranthus hybridus HOM05D004619 ORTHO05D005738 1.5e-64 250.4 289 47.4
vmacro23276 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 4.4e-61 238.8 329 45.6
Phvul.001G074000 Phaseolus vulgaris HOM05D004619 ORTHO05D005738 3.2e-59 232.6 227 52.0
TAR636G2525 Trochodendron aralioides HOM05D004619 ORTHO05D005738 3.5e-58 229.2 227 52.0
SHI18685 Sapria himalayana HOM05D004619 ORTHO05D005738 8.6e-57 224.6 270 48.5
Actinidia14676 Actinidia chinensis HOM05D004619 ORTHO05D005738 4.7e-55 218.8 167 68.3
Pp3c16_3750 Physcomitrium patens HOM05D004619 ORTHO05D005738 1.1e-51 207.6 306 41.5
VMungo0647G0418 Vigna mungo HOM05D004619 ORTHO05D005738 5.4e-51 205.3 199 50.3
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 7.8e-50 201.4 196 51.5
Eucgr.C00551 Eucalyptus grandis HOM05D004619 ORTHO05D005738 8.6e-49 198.0 224 47.8
Mapoly0014s0066 Marchantia polymorpha HOM05D004619 ORTHO05D005738 4.6e-42 175.6 301 35.2
Lj5g0023577 Lotus japonicus HOM05D004619 ORTHO05D005738 2.4e-35 153.3 120 59.2
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 5.6e-32 142.1 154 48.7
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis HOM05D004619 ORTHO05D005738 2.4e-30 136.7 190 40.0
SEGI_12145 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 1.9e-24 117.1 100 54.0
CDE08G0324 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 3.1e-14 83.2 65 64.6
Dinv23369 Davidia involucrata HOM05D004619 ORTHO05D005738 2.9e-12 76.6 56 67.9
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 4.2e-11 72.8 61 54.1
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 9.3e-11 71.6 70 48.6
Oeu031693.1 Olea europaea HOM05D004619 ORTHO05D005738 2.7e-10 70.1 51 56.9
Glyma.14G146000 Glycine max HOM05D004619 ORTHO05D005738 1.3e-09 67.8 53 64.2
SEGI_14473 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 1.8e-09 67.4 70 47.1
SEGI_32974 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 3.3e-08 63.2 51 54.9
Nn8g39123 Nelumbo nucifera HOM05D005233 ORTHO05D006308 7.4e-08 62.0 48 62.5
CBR_g55391 Chara braunii HOM05D000019 ORTHO05D000002 4.8e-07 59.3 212 25.9


User provided reference genes

Program Settings