Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_46.g18521 Utricularia gibba HOM05D006308 ORTHO05D007820 1.0e-128 463.4 230 100.0
SGA_v2.0_scaffold186G40217 Striga asiatica HOM05D006308 ORTHO05D007820 8.3e-70 267.7 204 70.1
MSTRG.7060 Avicennia marina HOM05D006308 ORTHO05D007820 2.7e-68 262.7 161 80.7
CSS0031885 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 4.5e-68 261.9 161 80.7
CSS0041769 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 4.5e-68 261.9 161 80.7
Migut.M01556 Erythranthe guttata HOM05D006308 ORTHO05D007820 5.9e-68 261.5 197 70.1
CsaV3_4G007640 Cucumis sativus L. HOM05D006308 ORTHO05D007820 1.0e-67 260.8 244 58.6
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 2.3e-67 259.6 162 78.4
CiPaw.12G004900 Carya illinoinensis HOM05D006308 ORTHO05D007820 2.3e-67 259.6 202 67.3
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.3e-67 259.6 195 72.3
Ciclev10021874m.g Citrus clementina HOM05D006308 ORTHO05D007820 2.9e-67 259.2 156 82.1
MELO3C016177.2 Cucumis melo HOM05D006308 ORTHO05D007820 2.9e-67 259.2 212 64.6
ClCG07G010660 Citrullus lanatus HOM05D006308 ORTHO05D007820 3.3e-66 255.8 209 64.1
GSVIVG01020411001 Vitis vinifera HOM05D006308 ORTHO05D007820 4.2e-66 255.4 162 79.6
Gorai.009G355200 Gossypium raimondii HOM05D006308 ORTHO05D007820 5.5e-66 255.0 155 81.3
Manes.14G016400 Manihot esculenta HOM05D006308 ORTHO05D007820 5.5e-66 255.0 153 82.4
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 5.5e-66 255.0 164 76.2
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 5.5e-66 255.0 170 73.5
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 5.5e-66 255.0 170 73.5
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 5.5e-66 255.0 168 74.4
Thecc.07G152500 Theobroma cacao HOM05D006308 ORTHO05D007820 5.5e-66 255.0 156 82.1
Gohir.A04G049000 Gossypium hirsutum HOM05D006308 ORTHO05D007820 7.2e-66 254.6 155 81.3
Eucgr.F01457 Eucalyptus grandis HOM05D006308 ORTHO05D007820 1.2e-65 253.8 161 77.6
Lj1A905G40 Lonicera japonica HOM05D006308 ORTHO05D007820 1.2e-65 253.8 157 79.6
arahy.Tifrunner.gnm1.ann1.1EF43V Arachis hypogaea HOM05D006308 ORTHO05D007820 3.6e-65 252.3 156 80.8
Hma1.2p1_0334F.1_g128750 Hydrangea macrophylla HOM05D006308 ORTHO05D007820 3.6e-65 252.3 161 78.9
SalBow8G4544 Salvia bowleyana HOM05D006308 ORTHO05D007820 3.6e-65 252.3 181 72.4
Sc06g0001530 Simmondsia chinensis HOM05D006308 ORTHO05D007820 3.6e-65 252.3 183 70.5
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 4.7e-65 251.9 156 78.8
Gohir.D05G331300 Gossypium hirsutum HOM05D006308 ORTHO05D007820 6.1e-65 251.5 155 80.0
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 8.0e-65 251.1 164 78.0
QL08p064492 Quercus lobata HOM05D006308 ORTHO05D007820 1.0e-64 250.8 156 80.8
Duzib213G0994 Durio zibethinus HOM05D006308 ORTHO05D007820 1.4e-64 250.4 156 78.2
COL.COLO4_07328 Corchorus olitorius HOM05D006308 ORTHO05D007820 1.8e-64 250.0 156 78.8
vmacro11665 Vaccinium macrocarpon HOM05D006308 ORTHO05D007820 1.8e-64 250.0 178 73.0
Lalb_Chr20g0108751 Lupinus albus HOM05D006308 ORTHO05D007820 1.2e-63 247.3 156 78.8
Rhsim06G0239000 Rhododendron simsii HOM05D006308 ORTHO05D007820 1.2e-63 247.3 159 76.7
Lj3g0010937 Lotus japonicus HOM05D006308 ORTHO05D007820 1.5e-63 246.9 205 63.9
MBI04_g08705_MAGBIO Magnolia biondii HOM05D006308 ORTHO05D007820 1.5e-63 246.9 154 79.2
Glyma.15G255800 Glycine max HOM05D006308 ORTHO05D007820 2.0e-63 246.5 202 63.9
Sed0010671 Sechium edule HOM05D006308 ORTHO05D007820 3.4e-63 245.7 156 77.6
Glyma.08G172200 Glycine max HOM05D006308 ORTHO05D007820 4.4e-63 245.4 202 63.9
Thhalv10021431m.g Eutrema salsugineum HOM05D006308 ORTHO05D007820 9.8e-63 244.2 156 76.3
Nn6g31547 Nelumbo nucifera HOM05D006308 ORTHO05D007820 1.3e-62 243.8 155 78.7
Phvul.005G057100 Phaseolus vulgaris HOM05D006308 ORTHO05D007820 1.3e-62 243.8 202 62.9
Potri.011G142900 Populus trichocarpa HOM05D006308 ORTHO05D007820 1.3e-62 243.8 153 79.1
Sed0016869 Sechium edule HOM05D006308 ORTHO05D007820 1.3e-62 243.8 157 75.8
THA.LOC104822752 Tarenaya hassleriana HOM05D006308 ORTHO05D007820 2.2e-62 243.0 156 78.2
BraA05t22456Z Brassica rapa HOM05D006308 ORTHO05D007820 2.8e-62 242.7 181 68.0
Ca_03675_v3 Cicer arietinum L. HOM05D006308 ORTHO05D007820 2.8e-62 242.7 153 79.1
Sp3g11070 Schrenkiella parvula HOM05D006308 ORTHO05D007820 3.7e-62 242.3 156 76.3
BolC5t34167H Brassica oleracea HOM05D006308 ORTHO05D007820 4.9e-62 241.9 181 67.4
DCAR_016822 Daucus carota HOM05D006308 ORTHO05D007820 6.3e-62 241.5 210 62.4
Psat1g011160 Pisum sativum HOM05D006308 ORTHO05D007820 8.3e-62 241.1 156 76.3
CDE06G0902 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 1.1e-61 240.7 149 80.5
TPR.G9745 Trifolium pratense HOM05D006308 ORTHO05D007820 1.1e-61 240.7 182 68.1
Aqoxy5G00928 Aquilegia oxysepala HOM05D006308 ORTHO05D007820 1.4e-61 240.4 152 78.9
A05p36560 Brassica napus HOM05D006308 ORTHO05D007820 1.4e-61 240.4 181 67.4
Medtr2g069470 Medicago truncatula HOM05D006308 ORTHO05D007820 1.4e-61 240.4 156 75.6
A01p40570 Brassica napus HOM05D006308 ORTHO05D007820 3.1e-61 239.2 184 65.8
CARHR087450 Cardamine hirsuta HOM05D006308 ORTHO05D007820 3.1e-61 239.2 156 75.6
Haze_08539 Corylus avellana HOM05D006308 ORTHO05D007820 3.1e-61 239.2 243 56.0
C01p52210 Brassica napus HOM05D006308 ORTHO05D007820 4.1e-61 238.8 177 67.2
BolC1t05161H Brassica oleracea HOM05D006308 ORTHO05D007820 4.1e-61 238.8 177 67.2
TWI39G0290 Tripterygium wilfordii HOM05D006308 ORTHO05D007820 4.1e-61 238.8 156 76.3
EL10Ac2g03321 Beta vulgaris HOM05D006308 ORTHO05D007820 5.4e-61 238.4 176 68.2
AL3G24610 Arabidopsis lyrata HOM05D006308 ORTHO05D007820 7.0e-61 238.0 156 75.0
BcaC09g48280 Brassica carinata HOM05D006308 ORTHO05D007820 9.2e-61 237.7 177 66.7
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 1.2e-60 237.3 149 78.5
RcHm_v2.0_Chr5g0026561 Rosa chinensis HOM05D006308 ORTHO05D007820 1.6e-60 236.9 156 74.4
ATR0605G149 Amborella trichopoda HOM05D006308 ORTHO05D007820 2.0e-60 236.5 195 65.6
HanXRQChr10g0305791 Helianthus annuus HOM05D006308 ORTHO05D007820 2.0e-60 236.5 169 69.8
Aa31LG8G150 Aethionema arabicum HOM05D006308 ORTHO05D007820 2.7e-60 236.1 160 73.8
CANSAT80G1356 Cannabis sativa HOM05D006308 ORTHO05D007820 3.5e-60 235.7 157 74.5
Carub.0005s0924 Capsella rubella HOM05D006308 ORTHO05D007820 3.5e-60 235.7 156 73.7
MD10G1202500 Malus domestica HOM05D006308 ORTHO05D007820 3.5e-60 235.7 156 74.4
BraA01t04092Z Brassica rapa HOM05D006308 ORTHO05D007820 4.5e-60 235.3 184 65.2
ECA234G3728 Erigeron canadensis HOM05D006308 ORTHO05D007820 5.9e-60 235.0 179 66.5
AT3G12930 Arabidopsis thaliana HOM05D006308 ORTHO05D007820 7.8e-60 234.6 154 74.7
FAN16G0301 Fragaria x ananassa HOM05D006308 ORTHO05D007820 7.8e-60 234.6 156 73.1
arahy.Tifrunner.gnm1.ann1.HXV25C Arachis hypogaea HOM05D006308 ORTHO05D007820 1.0e-59 234.2 189 66.1
Sabra16G0310800 Salix brachista HOM05D006308 ORTHO05D007820 1.0e-59 234.2 153 76.5
Ah.16g106540 Amaranthus hybridus HOM05D006308 ORTHO05D007820 1.3e-59 233.8 160 70.6
FvH4_3g15760 Fragaria vesca HOM05D006308 ORTHO05D007820 1.3e-59 233.8 156 72.4
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 1.3e-59 233.8 156 72.4
FAN21G3038 Fragaria x ananassa HOM05D006308 ORTHO05D007820 1.3e-59 233.8 156 72.4
Potri.001G458600 Populus trichocarpa HOM05D006308 ORTHO05D007820 1.3e-59 233.8 153 75.8
Cc05_g16080 Coffea canephora HOM05D006308 ORTHO05D007820 1.7e-59 233.4 161 72.7
Lsat_1_v5_gn_5_125241 Lactuca sativa HOM05D006308 ORTHO05D007820 2.9e-59 232.6 157 70.7
PGR083G0385 Punica granatum HOM05D006308 ORTHO05D007820 2.9e-59 232.6 142 81.0
AUR62043126 Chenopodium quinoa HOM05D006308 ORTHO05D007820 8.6e-59 231.1 160 70.6
Prupe.4G139700 Prunus persica HOM05D006308 ORTHO05D007820 8.6e-59 231.1 163 71.8
C05p54980 Brassica napus HOM05D006308 ORTHO05D007820 7.3e-58 228.0 206 59.2
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 7.3e-58 228.0 156 71.2
BcaC05g29223 Brassica carinata HOM05D006308 ORTHO05D007820 2.8e-57 226.1 148 73.0
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 8.0e-57 224.6 204 62.7
Oeu051665.1 Olea europaea HOM05D006308 ORTHO05D007820 1.4e-56 223.8 195 63.1
HPP92_015477 Vanilla planifolia HOM05D006308 ORTHO05D007820 3.1e-56 222.6 154 72.7
PSO017G0504 Papaver somniferum HOM05D006308 ORTHO05D007820 3.4e-55 219.2 154 70.8
PSO170G1595 Papaver somniferum HOM05D006308 ORTHO05D007820 3.4e-55 219.2 154 70.1
Os09g0493600 Oryza sativa ssp. japonica HOM05D006308 ORTHO05D007820 5.8e-55 218.4 151 72.8
Mapoly0031s0088 Marchantia polymorpha HOM05D006308 ORTHO05D007820 1.9e-53 213.4 150 71.3
BcaB06g25499 Brassica carinata HOM05D006308 ORTHO05D007820 4.1e-53 212.2 231 51.5
Hund12461 Selenicereus undatus HOM05D006308 ORTHO05D007820 1.7e-51 206.8 160 65.6
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 1.5e-50 203.8 159 64.2
Dinv42509 Davidia involucrata HOM05D006308 ORTHO05D007820 2.1e-49 199.9 135 74.8
Pp3c9_2790 Physcomitrium patens HOM05D006308 ORTHO05D007820 3.4e-47 192.6 151 58.9
TAR381G0490 Trochodendron aralioides HOM05D006308 ORTHO05D007820 2.9e-46 189.5 123 77.2
VMungo1080G0665 Vigna mungo HOM05D006308 ORTHO05D007820 1.2e-44 184.1 120 75.8
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 4.6e-44 182.2 157 58.0
Actinidia12793 Actinidia chinensis HOM05D006308 ORTHO05D007820 4.3e-42 175.6 198 52.0
Manes.06G172000 Manihot esculenta HOM05D006308 ORTHO05D007820 8.9e-40 167.9 142 64.8
SMO367G0472 Selaginella moellendorffii HOM05D006308 ORTHO05D007820 1.9e-37 160.2 159 50.9
Actinidia07352 Actinidia chinensis HOM05D006308 ORTHO05D007820 2.3e-35 153.3 83 86.7
Nn3g19990 Nelumbo nucifera HOM05D006308 ORTHO05D007820 7.6e-31 138.3 133 58.6
Nn3g19991 Nelumbo nucifera HOM05D006308 ORTHO05D007820 7.6e-31 138.3 133 58.6
Cre03.g205600 Chlamydomonas reinhardtii HOM05D006308 ORTHO05D007820 6.2e-25 118.6 177 38.4
Nn3g18400 Nelumbo nucifera HOM05D006308 ORTHO05D007820 1.1e-24 117.9 86 72.1
Pp3c15_7010 Physcomitrium patens HOM05D006308 ORTHO05D007820 9.0e-24 114.8 106 47.2
MCO04G467 Micromonas commoda HOM05D006308 ORTHO05D007820 4.4e-23 112.5 119 42.9
CAN.G337.145 Capsicum annuum HOM05D006308 ORTHO05D007820 2.9e-22 109.8 85 64.7
A01p40580 Brassica napus HOM05D006308 ORTHO05D007820 2.1e-20 103.6 102 57.8
PRCOL_00002538 Prasinoderma coloniale HOM05D006308 ORTHO05D007820 1.0e-19 101.3 115 43.5
CBR_g48397 Chara braunii HOM05D006308 ORTHO05D007820 4.9e-14 82.4 83 54.2
Zm00001eb317050 Zea mays HOM05D006308 ORTHO05D007820 4.3e-10 69.3 120 38.3
AUR62039167 Chenopodium quinoa HOM05D007854 ORTHO05D138328 1.2e-07 61.2 37 75.7
Actinidia07353 Actinidia chinensis HOM05D006308 ORTHO05D007820 1.0e-06 58.2 109 36.7
arahy.Tifrunner.gnm1.ann1.QG9RQP Arachis hypogaea HOM05D030826 ORTHO05D023738 6.4e-06 55.5 43 67.4


User provided reference genes

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