Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_32.g11549 Utricularia gibba HOM05D000161 ORTHO05D005857 6.4e-243 843.6 404 100.0
SGA_v2.0_scaffold423G51450 Striga asiatica HOM05D000161 ORTHO05D005857 2.2e-179 632.5 411 75.4
MSTRG.16382 Avicennia marina HOM05D000161 ORTHO05D005857 1.6e-177 626.3 401 74.3
CSS0003887 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D005857 6.1e-177 624.4 358 81.6
Nitab4.5_0011255g0010 Nicotiana tabacum HOM05D000161 ORTHO05D005857 4.0e-176 621.7 409 74.3
Ciclev10011903m.g Citrus clementina HOM05D000161 ORTHO05D005857 2.0e-175 619.4 413 73.1
Nn7g38388 Nelumbo nucifera HOM05D000161 ORTHO05D005857 2.6e-175 619.0 405 74.6
Nitab4.5_0000075g0030 Nicotiana tabacum HOM05D000161 ORTHO05D005857 2.6e-175 619.0 361 80.6
Peaxi162Scf00005g00134 Petunia axillaris HOM05D000161 ORTHO05D005857 2.6e-175 619.0 416 72.6
SalBow8G0095 Salvia bowleyana HOM05D000161 ORTHO05D005857 4.4e-175 618.2 430 70.9
CAN.G465.6 Capsicum annuum HOM05D000161 ORTHO05D005857 2.8e-174 615.5 340 84.7
PGSC0003DMG400011264 Solanum tuberosum HOM05D000161 ORTHO05D005857 2.8e-174 615.5 340 84.4
Solyc10g005110.3 Solanum lycopersicum HOM05D000161 ORTHO05D005857 4.8e-174 614.8 399 75.4
Sopen10g001130 Solanum pennellii HOM05D000161 ORTHO05D005857 6.3e-174 614.4 399 74.9
arahy.Tifrunner.gnm1.ann1.S9CZ9A Arachis hypogaea HOM05D000161 ORTHO05D005857 1.1e-173 613.6 354 82.2
Dinv05290 Davidia involucrata HOM05D000161 ORTHO05D005857 1.1e-173 613.6 350 81.7
QL04p064793 Quercus lobata HOM05D000161 ORTHO05D005857 3.1e-173 612.1 340 83.8
Atru.chr8.1036 Acer truncatum HOM05D000161 ORTHO05D005857 4.1e-173 611.7 396 74.5
arahy.Tifrunner.gnm1.ann1.DVM8T3 Arachis hypogaea HOM05D000161 ORTHO05D005857 4.1e-173 611.7 399 74.4
Migut.M02037 Erythranthe guttata HOM05D000161 ORTHO05D005857 5.4e-173 611.3 403 73.7
PGR044G2307 Punica granatum HOM05D000161 ORTHO05D005857 5.4e-173 611.3 406 74.4
QL04p064724 Quercus lobata HOM05D000161 ORTHO05D005857 9.1e-173 610.5 342 83.6
CANSAT64G1800 Cannabis sativa HOM05D000161 ORTHO05D005857 2.0e-172 609.4 389 75.8
ClCG07G011020 Citrullus lanatus HOM05D000161 ORTHO05D005857 2.7e-172 609.0 409 73.6
Lj3g0003708 Lotus japonicus HOM05D000161 ORTHO05D005857 2.7e-172 609.0 340 84.1
THA.LOC104826018 Tarenaya hassleriana HOM05D000161 ORTHO05D005857 5.9e-172 607.8 339 83.8
LjContig00081g0009344 Lotus japonicus HOM05D000161 ORTHO05D005857 1.3e-171 606.7 339 83.8
CiPaw.06G002700 Carya illinoinensis HOM05D000161 ORTHO05D005857 1.7e-171 606.3 340 82.1
HanXRQChr03g0090181 Helianthus annuus HOM05D000161 ORTHO05D005857 1.7e-171 606.3 350 80.0
TWI60G0112 Tripterygium wilfordii HOM05D000161 ORTHO05D005857 1.7e-171 606.3 338 83.1
FAN09G1815 Fragaria x ananassa HOM05D000161 ORTHO05D005857 2.9e-171 605.5 337 84.0
FvH4_6g39170 Fragaria vesca HOM05D000161 ORTHO05D005857 3.8e-171 605.1 398 74.9
FAN02G1171 Fragaria x ananassa HOM05D000161 ORTHO05D005857 3.8e-171 605.1 348 82.5
FAN05G2261 Fragaria x ananassa HOM05D000161 ORTHO05D005857 3.8e-171 605.1 348 82.5
MD17G1131200 Malus domestica HOM05D000161 ORTHO05D005857 3.8e-171 605.1 393 74.3
RcHm_v2.0_Chr2g0153001 Rosa chinensis HOM05D000161 ORTHO05D005857 3.8e-171 605.1 393 74.8
FAN14G2022 Fragaria x ananassa HOM05D000161 ORTHO05D005857 6.5e-171 604.4 398 74.6
Manes.16G000600 Manihot esculenta HOM05D000161 ORTHO05D005857 6.5e-171 604.4 337 82.5
PSO384G2739 Papaver somniferum HOM05D000161 ORTHO05D005857 6.5e-171 604.4 341 81.8
MBI18_g38427_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D005857 8.6e-171 604.0 405 72.6
Carub.0006s3385 Capsella rubella HOM05D000161 ORTHO05D005857 1.1e-170 603.6 337 83.4
Potri.011G023900 Populus trichocarpa HOM05D000161 ORTHO05D005857 1.1e-170 603.6 337 83.4
Sc13g0008500 Simmondsia chinensis HOM05D000161 ORTHO05D005857 1.5e-170 603.2 353 80.2
TPR.G35901 Trifolium pratense HOM05D000161 ORTHO05D005857 1.5e-170 603.2 340 83.5
Aqoxy1G01372 Aquilegia oxysepala HOM05D000161 ORTHO05D005857 1.9e-170 602.8 402 72.1
Sabra11G0014900 Salix brachista HOM05D000161 ORTHO05D005857 1.9e-170 602.8 337 83.4
Phvul.008G289900 Phaseolus vulgaris HOM05D000161 ORTHO05D005857 2.5e-170 602.4 357 80.7
Medtr5g098800 Medicago truncatula HOM05D000161 ORTHO05D005857 3.2e-170 602.1 342 83.9
Hund11764 Selenicereus undatus HOM05D000161 ORTHO05D005857 3.2e-170 602.1 337 82.5
Glyma.14G003200 Glycine max HOM05D000161 ORTHO05D005857 5.5e-170 601.3 352 81.0
PSO017G6394 Papaver somniferum HOM05D000161 ORTHO05D005857 7.2e-170 600.9 385 74.8
Eucgr.K01354 Eucalyptus grandis HOM05D000161 ORTHO05D005857 1.2e-169 600.1 420 71.2
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 1.6e-169 599.7 339 81.4
BcaB02g06929 Brassica carinata HOM05D000161 ORTHO05D005857 2.1e-169 599.4 337 82.2
Lalb_Chr04g0247041 Lupinus albus HOM05D000161 ORTHO05D005857 2.1e-169 599.4 341 81.8
Prupe.3G183400 Prunus persica HOM05D000161 ORTHO05D005857 2.1e-169 599.4 393 73.3
Sp1g02440 Schrenkiella parvula HOM05D000161 ORTHO05D005857 2.1e-169 599.4 389 74.3
AT1G03475 Arabidopsis thaliana HOM05D000161 ORTHO05D005857 2.8e-169 599.0 338 82.2
ECA240G1954 Erigeron canadensis HOM05D000161 ORTHO05D005857 3.6e-169 598.6 338 82.0
DCAR_024972 Daucus carota HOM05D000161 ORTHO05D005857 4.7e-169 598.2 337 81.9
MD09G1144600 Malus domestica HOM05D000161 ORTHO05D005857 6.1e-169 597.8 393 73.5
C08p52750 Brassica napus HOM05D000161 ORTHO05D005857 8.0e-169 597.4 365 77.3
CARHR002850 Cardamine hirsuta HOM05D000161 ORTHO05D005857 8.0e-169 597.4 339 81.7
CDE02G0797 Ceratophyllum demersum HOM05D000161 ORTHO05D005857 8.0e-169 597.4 339 82.3
AL1G12980 Arabidopsis lyrata HOM05D000161 ORTHO05D005857 1.0e-168 597.0 339 82.3
Lj6A29G59 Lonicera japonica HOM05D000161 ORTHO05D005857 1.0e-168 597.0 340 81.8
Gorai.004G062500 Gossypium raimondii HOM05D000161 ORTHO05D005857 1.4e-168 596.7 414 71.3
Ah.07g209030 Amaranthus hybridus HOM05D000161 ORTHO05D005857 1.8e-168 596.3 376 76.9
BraA09t42165Z Brassica rapa HOM05D000161 ORTHO05D005857 2.3e-168 595.9 337 81.6
CsaV3_4G007220 Cucumis sativus L. HOM05D000161 ORTHO05D005857 2.3e-168 595.9 401 72.1
PSO478G0506 Papaver somniferum HOM05D000161 ORTHO05D005857 2.3e-168 595.9 385 74.3
Psat2g001760 Pisum sativum HOM05D000161 ORTHO05D005857 2.3e-168 595.9 399 73.2
Thhalv10007888m.g Eutrema salsugineum HOM05D000161 ORTHO05D005857 3.0e-168 595.5 388 74.2
C08p52850 Brassica napus HOM05D000161 ORTHO05D005857 4.0e-168 595.1 365 77.0
Haze_00005 Corylus avellana HOM05D000161 ORTHO05D005857 4.0e-168 595.1 341 82.1
A09p68290 Brassica napus HOM05D000161 ORTHO05D005857 6.8e-168 594.3 337 81.3
Thecc.01G176100 Theobroma cacao HOM05D000161 ORTHO05D005857 8.8e-168 594.0 384 75.3
Gohir.A08G050600 Gossypium hirsutum HOM05D000161 ORTHO05D005857 1.2e-167 593.6 408 72.1
Rhsim02G0171600 Rhododendron simsii HOM05D000161 ORTHO05D005857 1.2e-167 593.6 380 75.0
HPP92_026322 Vanilla planifolia HOM05D000161 ORTHO05D005857 1.5e-167 593.2 368 76.4
EL10Ac3g05707 Beta vulgaris HOM05D000161 ORTHO05D005857 3.4e-167 592.0 402 72.1
Ca_06491_v3 Cicer arietinum L. HOM05D000161 ORTHO05D005857 5.7e-167 591.3 365 78.4
A10p02010 Brassica napus HOM05D000161 ORTHO05D005857 7.5e-167 590.9 339 81.1
BraA10t42474Z Brassica rapa HOM05D000161 ORTHO05D005857 1.3e-166 590.1 339 80.8
Duzib138G0552 Durio zibethinus HOM05D000161 ORTHO05D005857 1.3e-166 590.1 398 72.1
CSS0041680 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D005857 3.7e-166 588.6 368 76.1
Carub.0001s0261 Capsella rubella HOM05D000161 ORTHO05D005857 3.7e-166 588.6 370 75.9
BcaC05g24526 Brassica carinata HOM05D000161 ORTHO05D005857 4.9e-166 588.2 340 80.9
C05p01960 Brassica napus HOM05D000161 ORTHO05D005857 4.9e-166 588.2 340 80.9
BolC5t28975H Brassica oleracea HOM05D000161 ORTHO05D005857 4.9e-166 588.2 340 80.9
Cfa016257 Carpinus fangiana HOM05D000161 ORTHO05D005857 4.9e-166 588.2 340 81.2
ATR0763G015 Amborella trichopoda HOM05D000161 ORTHO05D005857 1.4e-165 586.6 394 71.8
Hma1.2p1_0166F.1_g073470 Hydrangea macrophylla HOM05D000161 ORTHO05D005857 7.0e-165 584.3 347 79.0
TAR624G0726 Trochodendron aralioides HOM05D000161 ORTHO05D005857 5.9e-164 581.3 377 74.0
GSVIVG01015906001 Vitis vinifera HOM05D000161 ORTHO05D005857 1.0e-163 580.5 308 85.7
vmacro11023 Vaccinium macrocarpon HOM05D000161 ORTHO05D005857 2.5e-162 575.9 462 64.1
Os04g0610800 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D005857 2.8e-161 572.4 343 79.6
BolC8t52801H Brassica oleracea HOM05D000161 ORTHO05D005857 1.8e-160 569.7 369 74.3
Gohir.A07G184900 Gossypium hirsutum HOM05D000161 ORTHO05D005857 2.3e-160 569.3 353 76.2
Gohir.D08G060400 Gossypium hirsutum HOM05D000161 ORTHO05D005857 5.2e-160 568.2 302 85.1
Zm00001eb071140 Zea mays HOM05D000161 ORTHO05D005857 5.2e-160 568.2 376 73.7
Sed0024620 Sechium edule HOM05D000161 ORTHO05D005857 2.9e-158 562.4 376 72.9
AL6G49730 Arabidopsis lyrata HOM05D000161 ORTHO05D005857 3.7e-158 562.0 310 83.5
AUR62021226 Chenopodium quinoa HOM05D000161 ORTHO05D005857 1.6e-156 556.6 350 76.9
TAR626G1695 Trochodendron aralioides HOM05D000161 ORTHO05D005857 5.9e-156 554.7 316 82.0
BcaC07g42243 Brassica carinata HOM05D000161 ORTHO05D005857 1.2e-153 547.0 342 76.0
Lsat_1_v5_gn_3_111240 Lactuca sativa HOM05D000161 ORTHO05D005857 1.6e-153 546.6 367 73.0
AagrBONN_evm.TU.Sc2ySwM_228.282 Anthoceros agrestis HOM05D000161 ORTHO05D005857 3.6e-153 545.4 344 73.5
BcaC07g42252 Brassica carinata HOM05D000161 ORTHO05D005857 3.6e-153 545.4 341 76.0
AUR62016021 Chenopodium quinoa HOM05D000161 ORTHO05D005857 1.1e-152 543.9 376 71.8
Oeu008990.3 Olea europaea HOM05D000161 ORTHO05D005857 4.0e-152 542.0 497 56.7
Sp6g03240 Schrenkiella parvula HOM05D000161 ORTHO05D005857 7.5e-151 537.7 337 75.4
Gorai.007G172100 Gossypium raimondii HOM05D000161 ORTHO05D005857 9.8e-151 537.3 314 79.9
Pp3c21_600 Physcomitrium patens HOM05D000161 ORTHO05D005857 8.3e-150 534.3 363 69.1
Cpa.g.sc417.1 Carica papaya HOM05D000161 ORTHO05D005857 1.1e-149 533.9 342 74.0
Pp3c22_5800 Physcomitrium patens HOM05D000161 ORTHO05D005857 3.2e-149 532.3 351 70.9
Mapoly0039s0053 Marchantia polymorpha HOM05D000161 ORTHO05D005857 9.2e-149 530.8 336 73.5
Cc09_g04450 Coffea canephora HOM05D000161 ORTHO05D005857 7.8e-148 527.7 550 52.0
Oeu008737.1 Olea europaea HOM05D000161 ORTHO05D005857 7.8e-148 527.7 551 53.0
MELO3C016226.2 Cucumis melo HOM05D000161 ORTHO05D005857 1.3e-147 526.9 340 75.0
SMO354G0013 Selaginella moellendorffii HOM05D000161 ORTHO05D005857 2.1e-145 519.6 303 77.9
BcaC07g42260 Brassica carinata HOM05D000161 ORTHO05D005857 1.0e-131 474.2 243 86.0
MCO07G306 Micromonas commoda HOM05D000161 ORTHO05D005857 1.0e-131 474.2 337 68.0
PRCOL_00002331 Prasinoderma coloniale HOM05D000161 ORTHO05D005857 8.4e-126 454.5 308 67.5
Gorai.001G214600 Gossypium raimondii HOM05D000161 ORTHO05D005857 7.1e-125 451.4 290 73.4
CDE05G1536 Ceratophyllum demersum HOM05D000161 ORTHO05D005857 3.9e-123 445.7 339 67.6
Cre02.g085450 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D005857 4.3e-122 442.2 342 60.5
Gohir.D11G161800 Gossypium hirsutum HOM05D000161 ORTHO05D005857 5.1e-107 392.1 239 77.0
Zm00001eb430670 Zea mays HOM05D000161 ORTHO05D005857 5.3e-104 382.1 246 75.2
CBR_g45705 Chara braunii HOM05D000161 ORTHO05D005857 1.5e-103 380.6 341 57.5
Cfa025537 Carpinus fangiana HOM05D000161 ORTHO05D005857 5.8e-103 378.6 333 55.9
Thhalv10029252m.g Eutrema salsugineum HOM05D000161 ORTHO05D005857 4.6e-100 369.0 212 80.7
THA.LOC104815952 Tarenaya hassleriana HOM05D000161 ORTHO05D005857 2.2e-97 360.1 218 78.4
Haze_26605 Corylus avellana HOM05D000161 ORTHO05D005857 5.7e-90 335.5 288 55.6
Gohir.A11G154900 Gossypium hirsutum HOM05D000161 ORTHO05D005857 1.4e-88 330.9 211 73.9
Gohir.D07G191700 Gossypium hirsutum HOM05D000161 ORTHO05D005857 3.9e-83 312.8 201 72.6
AT4G03205 Arabidopsis thaliana HOM05D000161 ORTHO05D005857 2.3e-75 287.0 184 75.0
Mapoly0070s0075 Marchantia polymorpha HOM05D000161 ORTHO05D005857 4.0e-67 259.6 401 37.9
PSO339G2005 Papaver somniferum HOM05D000161 ORTHO05D005857 5.7e-66 255.8 127 89.8
AagrBONN_evm.TU.Sc2ySwM_228.3299 Anthoceros agrestis HOM05D000161 ORTHO05D005857 1.3e-65 254.6 320 42.5
MCO09G037 Micromonas commoda HOM05D000161 ORTHO05D005857 6.3e-65 252.3 374 40.4
Pp3c15_4200 Physcomitrium patens HOM05D000161 ORTHO05D005857 1.2e-63 248.1 328 40.5
CBR_g23778 Chara braunii HOM05D000161 ORTHO05D005857 2.7e-63 246.9 368 38.0
Cre02.g092600 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D005857 1.5e-58 231.1 329 38.3
arahy.Tifrunner.gnm1.ann1.I5BL8A Arachis hypogaea HOM05D000161 ORTHO05D005857 2.5e-53 213.8 179 60.9
PRCOL_00006910 Prasinoderma coloniale HOM05D000161 ORTHO05D005857 3.3e-53 213.4 334 37.1
SEGI_02394 Sequoiadendron giganteum HOM05D000161 ORTHO05D005857 6.3e-49 199.1 247 40.1
Hma1.2p1_2159F.1_g315510 Hydrangea macrophylla HOM05D000161 ORTHO05D005857 1.1e-45 188.3 114 78.9
arahy.Tifrunner.gnm1.ann1.0Q00UB Arachis hypogaea HOM05D000235 ORTHO05D000147 2.3e-43 180.6 155 58.7
arahy.Tifrunner.gnm1.ann1.F4AYRR Arachis hypogaea HOM05D000161 ORTHO05D005857 3.1e-27 127.1 92 66.3
SHI00986 Sapria himalayana HOM05D000161 ORTHO05D005857 3.5e-23 113.6 55 89.1
CARHR251640 Cardamine hirsuta HOM05D000161 ORTHO05D116224 2.5e-21 107.5 155 41.9
arahy.Tifrunner.gnm1.ann1.0Z8MR5 Arachis hypogaea HOM05D000161 ORTHO05D003903 1.8e-19 101.3 62 77.4
CAN.G129.44 Capsicum annuum HOM05D000161 ORTHO05D005857 1.2e-18 98.6 93 59.1
arahy.Tifrunner.gnm1.ann1.6HI1EE Arachis hypogaea HOM05D000161 ORTHO05D005857 3.9e-14 83.6 49 75.5
RcHm_v2.0_Chr6g0298511 Rosa chinensis HOM05D000161 ORTHO05D340689 8.1e-12 75.9 167 35.9
arahy.Tifrunner.gnm1.ann1.1EXH41 Arachis hypogaea HOM05D000161 ORTHO05D003770 4.0e-11 73.6 34 82.4
CARHR251650 Cardamine hirsuta HOM05D000161 ORTHO05D115956 1.5e-10 71.6 65 56.9
arahy.Tifrunner.gnm1.ann1.DD88BD Arachis hypogaea HOM05D000161 ORTHO05D086871 1.3e-09 68.6 31 87.1


User provided reference genes

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