Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g5433 Utricularia gibba HOM05D005087 ORTHO05D006427 5.4e-132 474.6 281 100.0
Migut.B01270 Erythranthe guttata HOM05D005087 ORTHO05D006427 7.8e-62 241.5 398 40.7
SalBow5G2001 Salvia bowleyana HOM05D005087 ORTHO05D006427 5.0e-61 238.8 398 39.2
SalBow5G0870 Salvia bowleyana HOM05D005087 ORTHO05D006427 6.6e-61 238.4 398 39.2
SGA_v2.0_scaffold119G32758 Striga asiatica HOM05D005087 ORTHO05D006427 6.4e-56 221.9 398 38.4
Hma1.2p1_0685F.1_g203130 Hydrangea macrophylla HOM05D005087 ORTHO05D006427 1.6e-51 207.2 394 36.8
Hma1.2p1_0685F.1_g203140 Hydrangea macrophylla HOM05D005087 ORTHO05D006427 1.6e-51 207.2 394 36.8
Nitab4.5_0002388g0080 Nicotiana tabacum HOM05D005087 ORTHO05D006427 3.1e-50 203.0 398 35.4
TAR623G1255 Trochodendron aralioides HOM05D005087 ORTHO05D006427 3.1e-50 203.0 398 36.2
CiPaw.14G002700 Carya illinoinensis HOM05D005087 ORTHO05D006427 5.2e-50 202.2 399 35.8
MSTRG.17010 Avicennia marina HOM05D005087 ORTHO05D006427 4.4e-49 199.1 180 61.1
Actinidia21541 Actinidia chinensis HOM05D005087 ORTHO05D006427 5.8e-49 198.7 398 35.7
Rhsim01G0127000 Rhododendron simsii HOM05D005087 ORTHO05D006427 5.8e-49 198.7 398 35.4
CAN.G219.75 Capsicum annuum HOM05D005087 ORTHO05D006427 2.9e-48 196.4 398 35.7
Ciclev10030582m.g Citrus clementina HOM05D005087 ORTHO05D006427 2.9e-48 196.4 398 35.4
HanXRQChr01g0007751 Helianthus annuus HOM05D005087 ORTHO05D006427 2.9e-48 196.4 398 34.7
MBI11_g23277_MAGBIO Magnolia biondii HOM05D005087 ORTHO05D006427 4.9e-48 195.7 392 36.0
vmacro21195 Vaccinium macrocarpon HOM05D005087 ORTHO05D006427 4.9e-48 195.7 418 35.2
PGR031G1517 Punica granatum HOM05D005087 ORTHO05D006427 6.4e-48 195.3 347 38.6
Atru.chr11.2578 Acer truncatum HOM05D005087 ORTHO05D006427 1.9e-47 193.7 398 34.4
Dinv09311 Davidia involucrata HOM05D005087 ORTHO05D006427 3.2e-47 193.0 398 35.4
Peaxi162Scf00694g00319 Petunia axillaris HOM05D005087 ORTHO05D006427 3.2e-47 193.0 394 34.8
DCAR_029700 Daucus carota HOM05D005087 ORTHO05D006427 5.4e-47 192.2 404 33.7
GSVIVG01032195001 Vitis vinifera HOM05D005087 ORTHO05D006427 3.5e-46 189.5 398 34.9
ATR0626G229 Amborella trichopoda HOM05D005087 ORTHO05D006427 7.8e-46 188.3 402 34.3
Lsat_1_v5_gn_1_103161 Lactuca sativa HOM05D005087 ORTHO05D006427 7.8e-46 188.3 397 34.0
Sabra16G0161000 Salix brachista HOM05D005087 ORTHO05D006427 2.3e-45 186.8 412 34.2
Thecc.05G218700 Theobroma cacao HOM05D005087 ORTHO05D006427 3.9e-45 186.0 397 34.0
Duzib177G0717 Durio zibethinus HOM05D005087 ORTHO05D006427 6.6e-45 185.3 396 34.1
Cfa022636 Carpinus fangiana HOM05D005087 ORTHO05D006427 1.5e-44 184.1 397 34.5
ClCG09G004390 Citrullus lanatus HOM05D005087 ORTHO05D006427 5.6e-44 182.2 398 34.4
QL04p009808 Quercus lobata HOM05D005087 ORTHO05D006427 9.5e-44 181.4 402 34.3
AL6G26800 Arabidopsis lyrata HOM05D005087 ORTHO05D006427 3.6e-43 179.5 397 33.8
Prupe.2G022000 Prunus persica HOM05D005087 ORTHO05D006427 3.6e-43 179.5 390 33.6
CSS0029256 Camellia sinensis var. sinensis HOM05D005087 ORTHO05D006427 6.2e-43 178.7 391 34.5
Lj9C640G8 Lonicera japonica HOM05D005087 ORTHO05D006427 1.1e-42 177.9 398 33.2
MELO3C023581.2 Cucumis melo HOM05D005087 ORTHO05D006427 3.1e-42 176.4 398 33.9
Manes.10G136400 Manihot esculenta HOM05D005087 ORTHO05D006427 3.1e-42 176.4 387 33.1
CsaV3_7G030750 Cucumis sativus L. HOM05D005087 ORTHO05D006427 6.8e-42 175.3 398 34.2
PSO339G3397 Papaver somniferum HOM05D005087 ORTHO05D006427 6.8e-42 175.3 397 33.0
Thhalv10012535m.g Eutrema salsugineum HOM05D005087 ORTHO05D006427 8.9e-42 174.9 398 32.9
TWI09G0473 Tripterygium wilfordii HOM05D005087 ORTHO05D006427 3.4e-41 172.9 400 31.8
Glyma.20G198300 Glycine max HOM05D005087 ORTHO05D006427 4.4e-41 172.6 398 32.2
Phvul.002G285500 Phaseolus vulgaris HOM05D005087 ORTHO05D006427 7.5e-41 171.8 398 31.4
Aa31LG11G13680 Aethionema arabicum HOM05D005087 ORTHO05D006427 9.9e-41 171.4 404 32.7
RcHm_v2.0_Chr1g0317911 Rosa chinensis HOM05D005087 ORTHO05D006427 1.7e-40 170.6 389 32.6
AT5G15920 Arabidopsis thaliana HOM05D005087 ORTHO05D006427 2.2e-40 170.2 398 32.4
SHI04082 Sapria himalayana HOM05D005087 ORTHO05D006427 2.9e-40 169.9 398 31.7
Gohir.D13G161900 Gossypium hirsutum HOM05D005087 ORTHO05D006427 3.7e-40 169.5 398 32.7
Gorai.013G183900 Gossypium raimondii HOM05D005087 ORTHO05D006427 3.7e-40 169.5 398 32.7
Medtr3g033470 Medicago truncatula HOM05D005087 ORTHO05D006427 6.4e-40 168.7 389 31.9
BcaB01g05014 Brassica carinata HOM05D005087 ORTHO05D006427 8.3e-40 168.3 393 33.3
Lj3g0015731 Lotus japonicus HOM05D005087 ORTHO05D006427 8.3e-40 168.3 398 31.4
Ca_14518_v3 Cicer arietinum L. HOM05D005087 ORTHO05D006427 2.4e-39 166.8 400 31.2
Potri.001G262600 Populus trichocarpa HOM05D005087 ORTHO05D006427 3.2e-39 166.4 404 32.9
Psat6g018320 Pisum sativum HOM05D005087 ORTHO05D006427 4.1e-39 166.0 398 31.2
Aqoxy1G00327 Aquilegia oxysepala HOM05D005087 ORTHO05D006427 5.4e-39 165.6 398 32.2
Solyc01g087720.4 Solanum lycopersicum HOM05D005087 ORTHO05D006427 5.4e-39 165.6 398 32.2
Sc10g0000340 Simmondsia chinensis HOM05D005087 ORTHO05D006427 7.1e-39 165.2 398 32.4
Sopen01g034670 Solanum pennellii HOM05D005087 ORTHO05D006427 9.2e-39 164.9 398 32.2
CARHR197390 Cardamine hirsuta HOM05D005087 ORTHO05D006427 1.6e-38 164.1 389 32.1
MD07G1021900 Malus domestica HOM05D005087 ORTHO05D006427 1.6e-38 164.1 398 31.7
Medtr4g115050 Medicago truncatula HOM05D005087 ORTHO05D006427 2.1e-38 163.7 398 31.7
CDE09G1121 Ceratophyllum demersum HOM05D005087 ORTHO05D006427 6.0e-38 162.2 180 49.4
Sp6g28190 Schrenkiella parvula HOM05D005087 ORTHO05D006427 6.0e-38 162.2 398 31.9
Carub.0006s1411 Capsella rubella HOM05D005087 ORTHO05D006427 1.0e-37 161.4 398 31.7
SEGI_29436 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 2.3e-37 160.2 397 29.5
CANSAT80G0443 Cannabis sativa HOM05D005087 ORTHO05D006427 3.0e-37 159.8 377 32.1
FAN03G0563 Fragaria x ananassa HOM05D005087 ORTHO05D006427 3.0e-37 159.8 395 31.9
FvH4_7g01640 Fragaria vesca HOM05D005087 ORTHO05D006427 1.5e-36 157.5 395 31.4
FAN06G3789 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.5e-36 157.5 395 31.4
FAN10G1149 Fragaria x ananassa HOM05D005087 ORTHO05D006427 2.5e-36 156.8 395 31.9
TPR.G14572 Trifolium pratense HOM05D005087 ORTHO05D006427 3.3e-36 156.4 398 31.2
BraA03t10076Z Brassica rapa HOM05D005087 ORTHO05D006427 4.3e-36 156.0 404 31.4
Cc02_g28540 Coffea canephora HOM05D005087 ORTHO05D006427 5.6e-36 155.6 180 50.0
Gohir.A13G157100 Gossypium hirsutum HOM05D005087 ORTHO05D006427 2.1e-35 153.7 398 31.4
Hund09863 Selenicereus undatus HOM05D005087 ORTHO05D006427 2.8e-35 153.3 180 48.3
C03p08670 Brassica napus HOM05D005087 ORTHO05D006427 6.2e-35 152.1 404 30.9
BolC3t13367H Brassica oleracea HOM05D005087 ORTHO05D006427 6.2e-35 152.1 404 30.9
AUR62023092 Chenopodium quinoa HOM05D005087 ORTHO05D006427 1.8e-34 150.6 398 30.2
A03p07470 Brassica napus HOM05D005087 ORTHO05D006427 2.4e-34 150.2 398 30.4
Cpa.g.sc125.40 Carica papaya HOM05D005087 ORTHO05D006427 2.4e-34 150.2 180 48.9
THA.LOC104819098 Tarenaya hassleriana HOM05D005087 ORTHO05D006427 4.0e-34 149.4 398 30.2
Nitab4.5_0000707g0070 Nicotiana tabacum HOM05D005087 ORTHO05D006427 6.8e-34 148.7 398 31.4
Lju99A9T21 Lonicera japonica HOM05D005087 ORTHO05D006427 2.6e-33 146.7 413 29.8
AUR62009415 Chenopodium quinoa HOM05D005087 ORTHO05D006427 9.9e-33 144.8 384 30.5
Lalb_Chr04g0263871 Lupinus albus HOM05D005087 ORTHO05D006427 4.9e-32 142.5 398 28.9
ECA248G2604 Erigeron canadensis HOM05D005087 ORTHO05D006427 1.1e-31 141.4 397 29.2
VMungo0251G2588 Vigna mungo HOM05D005087 ORTHO05D006427 1.9e-31 140.6 180 44.4
Sed0026614 Sechium edule HOM05D005087 ORTHO05D006427 4.1e-31 139.4 180 47.2
Zm00001eb225540 Zea mays HOM05D005087 ORTHO05D006427 1.6e-30 137.5 403 26.8
Eucgr.G03334 Eucalyptus grandis HOM05D005087 ORTHO05D006427 1.0e-29 134.8 398 28.1
SEGI_40819 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.9e-29 132.9 180 42.2
Medtr5g036370 Medicago truncatula HOM05D005087 ORTHO05D006427 5.1e-29 132.5 398 29.1
Lj3g0013327 Lotus japonicus HOM05D005087 ORTHO05D006427 1.1e-28 131.3 363 30.0
Nn7g36293 Nelumbo nucifera HOM05D005087 ORTHO05D006427 6.2e-27 125.6 180 38.9
Os05g0596600 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 8.1e-27 125.2 397 26.7
Haze_03133 Corylus avellana HOM05D005087 ORTHO05D006427 1.1e-26 124.8 202 41.6
Haze_03136 Corylus avellana HOM05D005087 ORTHO05D006427 1.1e-26 124.8 202 41.6
PSO210G7144 Papaver somniferum HOM05D005087 ORTHO05D006427 1.5e-25 120.9 401 26.9
arahy.Tifrunner.gnm1.ann1.JJ1LEU Arachis hypogaea HOM05D005087 ORTHO05D006427 1.3e-24 117.9 379 26.6
HPP92_016894 Vanilla planifolia HOM05D005087 ORTHO05D006427 1.3e-24 117.9 176 39.8
arahy.Tifrunner.gnm1.ann1.1A5L99 Arachis hypogaea HOM05D005087 ORTHO05D006427 1.4e-23 114.4 389 26.5
Actinidia13977 Actinidia chinensis HOM05D005087 ORTHO05D006427 3.2e-23 113.2 104 58.7
EL10Ac2g04364 Beta vulgaris HOM05D005087 ORTHO05D006427 4.6e-22 109.4 64 81.2
Oeu049481.1 Olea europaea HOM05D005087 ORTHO05D006427 1.0e-21 108.2 55 92.7
TAR623G1215 Trochodendron aralioides HOM05D005087 ORTHO05D006427 2.3e-21 107.1 59 83.1
Cc00_g23000 Coffea canephora HOM05D005087 ORTHO05D006427 3.9e-21 106.3 60 83.3
Hund09862 Selenicereus undatus HOM05D005087 ORTHO05D006427 3.9e-21 106.3 59 81.4
Pp3c24_4940 Physcomitrium patens HOM05D005087 ORTHO05D006427 8.7e-21 105.1 386 25.4
Hund09856 Selenicereus undatus HOM05D005087 ORTHO05D006427 2.5e-20 103.6 59 78.0
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 5.6e-20 102.4 63 73.0
EL10Ac2g04365 Beta vulgaris HOM05D005087 ORTHO05D006427 3.6e-19 99.8 196 37.2
SEGI_00270 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 1.4e-18 97.8 58 75.9
Mapoly0007s0066 Marchantia polymorpha HOM05D005087 ORTHO05D006427 1.5e-17 94.4 397 24.4
Os11g0572900 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 2.6e-17 93.6 62 67.7
Os11g0577350 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 1.3e-16 91.3 62 66.1
SMO143G0265 Selaginella moellendorffii HOM05D005087 ORTHO05D006427 4.2e-15 86.3 55 70.9
AagrBONN_evm.TU.Sc2ySwM_344.2054 Anthoceros agrestis HOM05D005087 ORTHO05D006427 1.2e-14 84.7 169 35.5
CBR_g88572 Chara braunii HOM05D005087 ORTHO05D000002 2.3e-13 80.5 59 59.3
MCO04G035 Micromonas commoda HOM05D005087 ORTHO05D006427 2.1e-11 73.9 64 46.9
PRCOL_00002930 Prasinoderma coloniale HOM05D005087 ORTHO05D006427 1.1e-10 71.6 248 30.6
Cfa027028 Carpinus fangiana HOM05D005087 ORTHO05D006427 3.1e-10 70.1 56 51.8
Cre10.g440200 Chlamydomonas reinhardtii HOM05D005087 ORTHO05D006427 1.5e-09 67.8 55 56.4
Haze_26632 Corylus avellana HOM05D004178 ORTHO05D005204 2.0e-09 67.4 93 39.8


User provided reference genes

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