Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20440 Utricularia gibba HOM05D000463 ORTHO05D004638 1.8e-70 269.2 144 100.0
unitig_744.g24406 Utricularia gibba HOM05D000463 ORTHO05D004638 3.0e-49 198.7 144 77.1
MSTRG.26081 Avicennia marina HOM05D000463 ORTHO05D004638 9.6e-24 114.0 152 53.9
Cc06_g15750 Coffea canephora HOM05D000463 ORTHO05D004638 8.1e-23 110.9 142 52.8
Migut.K00031 Erythranthe guttata HOM05D000463 ORTHO05D004638 2.4e-22 109.4 96 69.8
CSS0036589 Camellia sinensis var. sinensis HOM05D000463 ORTHO05D004638 4.0e-22 108.6 138 58.0
SGA_v2.0_scaffold94G28415 Striga asiatica HOM05D000463 ORTHO05D004638 1.2e-21 107.1 127 58.3
MSTRG.10848 Avicennia marina HOM05D000463 ORTHO05D004638 4.4e-21 105.1 120 60.0
Dinv24062 Davidia involucrata HOM05D000463 ORTHO05D004638 1.7e-20 103.2 138 54.3
Solyc10g078900.3 Solanum lycopersicum HOM05D000463 ORTHO05D004638 1.7e-20 103.2 147 52.4
Sopen10g029520 Solanum pennellii HOM05D000463 ORTHO05D004638 1.7e-20 103.2 147 52.4
Hma1.2p1_0431F.1_g151550 Hydrangea macrophylla HOM05D000463 ORTHO05D004638 2.2e-20 102.8 137 51.1
Rhsim04G0096400 Rhododendron simsii HOM05D000463 ORTHO05D004638 3.8e-20 102.1 118 61.0
Lju124C25T1 Lonicera japonica HOM05D000463 ORTHO05D004638 6.4e-20 101.3 134 50.7
PGSC0003DMG400011419 Solanum tuberosum HOM05D000463 ORTHO05D004638 6.4e-20 101.3 147 51.7
Actinidia32402 Actinidia chinensis HOM05D000463 ORTHO05D004638 2.4e-19 99.4 118 61.9
Hma1.2p1_0676F.1_g201940 Hydrangea macrophylla HOM05D000463 ORTHO05D004638 4.2e-19 98.6 134 53.0
Peaxi162Scf00480g00032 Petunia axillaris HOM05D000463 ORTHO05D004638 5.4e-19 98.2 149 48.3
Oeu063871.1 Olea europaea HOM05D000463 ORTHO05D004638 9.3e-19 97.4 144 49.3
Oeu024493.1 Olea europaea HOM05D000463 ORTHO05D004638 1.6e-18 96.7 93 66.7
Haze_20006 Corylus avellana HOM05D000463 ORTHO05D004638 2.7e-18 95.9 142 50.7
Cfa020154 Carpinus fangiana HOM05D000463 ORTHO05D004638 3.5e-18 95.5 142 50.7
DCAR_017034 Daucus carota HOM05D000463 ORTHO05D004638 3.5e-18 95.5 104 64.4
Peaxi162Scf00003g00459 Petunia axillaris HOM05D000463 ORTHO05D004638 3.5e-18 95.5 135 50.4
PGR004G2023 Punica granatum HOM05D000463 ORTHO05D004638 3.5e-18 95.5 136 50.7
Oeu063565.1 Olea europaea HOM05D000463 ORTHO05D004638 4.6e-18 95.1 95 63.2
vmacro07897 Vaccinium macrocarpon HOM05D000463 ORTHO05D004638 7.8e-18 94.4 115 60.9
QL07p024138 Quercus lobata HOM05D000463 ORTHO05D004638 1.3e-17 93.6 135 51.9
arahy.Tifrunner.gnm1.ann1.Y6KX4T Arachis hypogaea HOM05D000463 ORTHO05D004638 1.7e-17 93.2 127 53.5
CANSAT64G1101 Cannabis sativa HOM05D000463 ORTHO05D004638 1.7e-17 93.2 143 49.0
Nitab4.5_0000105g0180 Nicotiana tabacum HOM05D000463 ORTHO05D004638 1.7e-17 93.2 118 55.9
Sc13g0002320 Simmondsia chinensis HOM05D000463 ORTHO05D004638 1.7e-17 93.2 103 59.2
EL10Ac3g06897 Beta vulgaris HOM05D000463 ORTHO05D004638 3.0e-17 92.4 90 62.2
FvH4_6g22060 Fragaria vesca HOM05D000463 ORTHO05D004638 3.0e-17 92.4 142 49.3
FAN02G3128 Fragaria x ananassa HOM05D000463 ORTHO05D004638 3.0e-17 92.4 142 49.3
FAN05G5176 Fragaria x ananassa HOM05D000463 ORTHO05D004638 3.0e-17 92.4 142 49.3
FAN09G4131 Fragaria x ananassa HOM05D000463 ORTHO05D004638 3.0e-17 92.4 142 49.3
FAN09G4568 Fragaria x ananassa HOM05D000463 ORTHO05D004638 3.0e-17 92.4 142 49.3
FAN14G0395 Fragaria x ananassa HOM05D000463 ORTHO05D004638 3.0e-17 92.4 142 49.3
FAN09G1798 Fragaria x ananassa HOM05D000463 ORTHO05D004638 3.9e-17 92.0 142 49.3
CiPaw.09G029500 Carya illinoinensis HOM05D000463 ORTHO05D004638 5.1e-17 91.7 142 51.4
CiPaw.10G025900 Carya illinoinensis HOM05D000463 ORTHO05D004638 5.1e-17 91.7 149 49.7
MD12G1055900 Malus domestica HOM05D000463 ORTHO05D004638 5.1e-17 91.7 151 47.7
Rhsim03G0005400 Rhododendron simsii HOM05D000463 ORTHO05D004638 5.1e-17 91.7 93 67.7
AUR62015353 Chenopodium quinoa HOM05D000463 ORTHO05D004638 6.6e-17 91.3 85 64.7
Lj1g0000378 Lotus japonicus HOM05D000463 ORTHO05D004638 6.6e-17 91.3 152 47.4
arahy.Tifrunner.gnm1.ann1.3D8856 Arachis hypogaea HOM05D000044 ORTHO05D004638 8.7e-17 90.9 118 55.1
Lalb_Chr18g0047951 Lupinus albus HOM05D000463 ORTHO05D004638 8.7e-17 90.9 133 54.9
Phvul.001G143400 Phaseolus vulgaris HOM05D000463 ORTHO05D004638 8.7e-17 90.9 137 51.1
Glyma.03G145700 Glycine max HOM05D000463 ORTHO05D004638 1.1e-16 90.5 137 51.1
Glyma.19G148900 Glycine max HOM05D000463 ORTHO05D004638 1.1e-16 90.5 137 51.1
TAR623G1638 Trochodendron aralioides HOM05D000463 ORTHO05D004638 1.1e-16 90.5 93 66.7
COL.COLO4_29337 Corchorus olitorius HOM05D000463 ORTHO05D004638 1.5e-16 90.1 99 63.6
Nitab4.5_0002343g0040 Nicotiana tabacum HOM05D000463 ORTHO05D004638 1.5e-16 90.1 118 55.1
RcHm_v2.0_Chr3g0479381 Rosa chinensis HOM05D000463 ORTHO05D004638 1.5e-16 90.1 134 50.0
TPR.G18218 Trifolium pratense HOM05D000463 ORTHO05D004638 1.5e-16 90.1 149 47.7
AUR62012018 Chenopodium quinoa HOM05D000463 ORTHO05D004638 1.9e-16 89.7 85 63.5
AUR62044685 Chenopodium quinoa HOM05D000463 ORTHO05D004638 1.9e-16 89.7 85 63.5
RcHm_v2.0_Chr3g0479391 Rosa chinensis HOM05D000463 ORTHO05D004638 1.9e-16 89.7 118 55.1
Psat3g068080 Pisum sativum HOM05D000463 ORTHO05D004638 2.5e-16 89.4 116 56.9
TWI77G0981 Tripterygium wilfordii HOM05D000463 ORTHO05D004638 2.5e-16 89.4 156 45.5
Ah.13g075760 Amaranthus hybridus HOM05D000463 ORTHO05D004638 3.3e-16 89.0 90 61.1
Ca_08529_v3 Cicer arietinum L. HOM05D000463 ORTHO05D004638 3.3e-16 89.0 153 48.4
Medtr7g093390 Medicago truncatula HOM05D000463 ORTHO05D004638 3.3e-16 89.0 137 51.1
Eucgr.A02461 Eucalyptus grandis HOM05D000463 ORTHO05D004638 4.3e-16 88.6 136 47.8
Oeu032201.1 Olea europaea HOM05D000463 ORTHO05D004638 5.6e-16 88.2 95 62.1
TWI74G1471 Tripterygium wilfordii HOM05D000463 ORTHO05D004638 5.6e-16 88.2 145 46.2
MD14G1055900 Malus domestica HOM05D000463 ORTHO05D004638 9.6e-16 87.4 148 47.3
Duzib128G0738 Durio zibethinus HOM05D000463 ORTHO05D004638 1.3e-15 87.0 99 62.6
MD02G1306100 Malus domestica HOM05D000463 ORTHO05D004638 1.3e-15 87.0 148 47.3
Lalb_Chr04g0259581 Lupinus albus HOM05D000463 ORTHO05D004638 1.6e-15 86.7 138 50.0
Thecc.05G173700 Theobroma cacao HOM05D000463 ORTHO05D004638 1.6e-15 86.7 93 64.5
TAR369G0419 Trochodendron aralioides HOM05D000463 ORTHO05D004638 1.6e-15 86.7 110 57.3
Atru.chr8.1131 Acer truncatum HOM05D000463 ORTHO05D004638 2.8e-15 85.9 86 65.1
HanXRQChr05g0132961 Helianthus annuus HOM05D000463 ORTHO05D004638 3.6e-15 85.5 78 66.7
TWI53G0008 Tripterygium wilfordii HOM05D000463 ORTHO05D004638 3.6e-15 85.5 112 55.4
VMungo1383G3187 Vigna mungo HOM05D000463 ORTHO05D004638 3.6e-15 85.5 133 50.4
Prupe.7G079200 Prunus persica HOM05D000463 ORTHO05D004638 4.8e-15 85.1 124 51.6
TAR633G0036 Trochodendron aralioides HOM05D000463 ORTHO05D004638 4.8e-15 85.1 105 53.3
Ciclev10011813m.g Citrus clementina HOM05D000463 ORTHO05D004638 6.2e-15 84.7 145 48.3
Gohir.D09G124600 Gossypium hirsutum HOM05D000463 ORTHO05D004638 1.8e-14 83.2 123 50.4
Eucgr.K01846 Eucalyptus grandis HOM05D000463 ORTHO05D004638 2.4e-14 82.8 134 47.0
Manes.09G036300 Manihot esculenta HOM05D000463 ORTHO05D004638 2.4e-14 82.8 137 46.0
Duzib093G0445 Durio zibethinus HOM05D000463 ORTHO05D004638 3.1e-14 82.4 91 61.5
Gohir.A11G314500 Gossypium hirsutum HOM05D000463 ORTHO05D004638 3.1e-14 82.4 136 47.8
Gohir.D11G331600 Gossypium hirsutum HOM05D000463 ORTHO05D004638 5.3e-14 81.6 136 47.1
Gorai.006G143500 Gossypium raimondii HOM05D000463 ORTHO05D004638 5.3e-14 81.6 123 49.6
Gorai.007G362400 Gossypium raimondii HOM05D000463 ORTHO05D004638 5.3e-14 81.6 136 47.1
Duzib106G0404 Durio zibethinus HOM05D000463 ORTHO05D004638 6.9e-14 81.3 108 56.5
Sabra06G0148700 Salix brachista HOM05D000463 ORTHO05D004638 1.2e-13 80.5 130 50.0
Sabra16G0061700 Salix brachista HOM05D000463 ORTHO05D004638 1.5e-13 80.1 134 48.5
ECA236G3685 Erigeron canadensis HOM05D000463 ORTHO05D004638 2.6e-13 79.3 90 62.2
Lj2P365T84 Lonicera japonica HOM05D000463 ORTHO05D004638 2.6e-13 79.3 120 51.7
Lalb_Chr15g0079031 Lupinus albus HOM05D000463 ORTHO05D004638 2.6e-13 79.3 118 55.9
MSTRG.6487 Avicennia marina HOM05D000463 ORTHO05D004638 3.4e-13 79.0 149 41.6
Aa31LG10G12730 Aethionema arabicum HOM05D000463 ORTHO05D004638 5.8e-13 78.2 142 48.6
Potri.006G193600 Populus trichocarpa HOM05D000463 ORTHO05D004638 1.3e-12 77.0 118 53.4
AL5G39690 Arabidopsis lyrata HOM05D000463 ORTHO05D004638 1.7e-12 76.6 137 47.4
Potri.016G058300 Populus trichocarpa HOM05D000463 ORTHO05D004638 1.7e-12 76.6 96 57.3
Lsat_1_v5_gn_8_74580 Lactuca sativa HOM05D000463 ORTHO05D004638 2.9e-12 75.9 98 58.2
Carub.0005s2488 Capsella rubella HOM05D000463 ORTHO05D004638 3.8e-12 75.5 137 47.4
Thhalv10005986m.g Eutrema salsugineum HOM05D000463 ORTHO05D004638 8.4e-12 74.3 137 47.4
THA.LOC104824479 Tarenaya hassleriana HOM05D000463 ORTHO05D004638 8.4e-12 74.3 127 45.7
Sp5g04690 Schrenkiella parvula HOM05D000463 ORTHO05D004638 1.1e-11 73.9 137 47.4
BcaB02g08281 Brassica carinata HOM05D000463 ORTHO05D004638 1.9e-11 73.2 140 47.1
Manes.08G043800 Manihot esculenta HOM05D000463 ORTHO05D004638 1.9e-11 73.2 137 43.1
AT3G58030 Arabidopsis thaliana HOM05D000463 ORTHO05D004638 2.4e-11 72.8 136 44.9
CARHR168350 Cardamine hirsuta HOM05D000463 ORTHO05D004638 3.2e-11 72.4 137 46.0
FAN09G4847 Fragaria x ananassa HOM05D003666 ORTHO05D004770 4.2e-11 72.0 79 62.0
CsaV3_3G038710 Cucumis sativus L. HOM05D000463 ORTHO05D004638 5.4e-11 71.6 114 48.2
Sed0011641 Sechium edule HOM05D000463 ORTHO05D004638 5.4e-11 71.6 75 62.7
C08p33590 Brassica napus HOM05D000463 ORTHO05D004638 1.2e-10 70.5 141 46.8
BolC8t50955H Brassica oleracea HOM05D000463 ORTHO05D004638 1.2e-10 70.5 141 46.8
ClCG10G017610 Citrullus lanatus HOM05D000463 ORTHO05D004638 1.6e-10 70.1 114 47.4
MELO3C009615.2 Cucumis melo HOM05D000463 ORTHO05D004638 1.6e-10 70.1 114 47.4
THA.LOC104820181 Tarenaya hassleriana HOM05D000463 ORTHO05D004638 1.6e-10 70.1 130 42.3
BcaB02g07555 Brassica carinata HOM05D000463 ORTHO05D004638 2.1e-10 69.7 158 43.0
A09p50850 Brassica napus HOM05D000463 ORTHO05D004638 3.5e-10 68.9 116 50.9
BraA09t40531Z Brassica rapa HOM05D000463 ORTHO05D004638 3.5e-10 68.9 116 50.9
AL4G40400 Arabidopsis lyrata HOM05D000463 ORTHO05D004638 6.0e-10 68.2 137 46.7
A07p23830 Brassica napus HOM05D000463 ORTHO05D004638 7.9e-10 67.8 158 42.4
C06p25040 Brassica napus HOM05D000463 ORTHO05D004638 7.9e-10 67.8 158 42.4
BolC6t37661H Brassica oleracea HOM05D000463 ORTHO05D004638 7.9e-10 67.8 158 42.4
BraA07t30036Z Brassica rapa HOM05D000463 ORTHO05D004638 7.9e-10 67.8 158 42.4
BcaC02g09982 Brassica carinata HOM05D000463 ORTHO05D004638 1.0e-09 67.4 115 50.4
C04p34360 Brassica napus HOM05D000463 ORTHO05D004638 1.0e-09 67.4 115 50.4
BolC4t24998H Brassica oleracea HOM05D000463 ORTHO05D004638 1.0e-09 67.4 115 50.4
BcaC07g40176 Brassica carinata HOM05D000463 ORTHO05D004638 1.8e-09 66.6 93 54.8
Gohir.A01G137578 Gossypium hirsutum HOM05D000463 ORTHO05D004638 1.8e-09 66.6 134 44.0
Sed0027278 Sechium edule HOM05D000463 ORTHO05D004638 1.8e-09 66.6 78 59.0
MD14G1056100 Malus domestica HOM05D000463 ORTHO05D004638 2.3e-09 66.2 71 60.6
THA.LOC104802629 Tarenaya hassleriana HOM05D000463 ORTHO05D004638 2.3e-09 66.2 131 42.7
BcaC08g44889 Brassica carinata HOM05D000463 ORTHO05D004638 8.7e-09 64.3 146 43.8
Carub.0004s2436 Capsella rubella HOM05D000463 ORTHO05D004638 2.5e-08 62.8 124 45.2
Sp4g24260 Schrenkiella parvula HOM05D000463 ORTHO05D004638 4.3e-08 62.0 126 42.9
CARHR137120 Cardamine hirsuta HOM05D000463 ORTHO05D004638 7.4e-08 61.2 150 43.3
Ah.04g152520 Amaranthus hybridus HOM05D000463 ORTHO05D004638 9.6e-08 60.8 89 50.6
Gorai.002G155900 Gossypium raimondii HOM05D000463 ORTHO05D004638 9.6e-08 60.8 99 50.5
AT2G42030 Arabidopsis thaliana HOM05D000463 ORTHO05D004638 2.1e-07 59.7 145 40.7
Sc19g0006060 Simmondsia chinensis HOM05D000463 ORTHO05D004638 4.8e-07 58.5 120 40.8
Actinidia22045 Actinidia chinensis HOM05D000463 ORTHO05D004638 1.4e-06 57.0 53 67.9
BcaC02g12454 Brassica carinata HOM05D000463 ORTHO05D004638 1.4e-06 57.0 74 59.5
C04p03210 Brassica napus HOM05D000463 ORTHO05D004638 1.4e-06 57.0 74 59.5
BolC4t21959H Brassica oleracea HOM05D000463 ORTHO05D004638 1.4e-06 57.0 74 59.5
A05p02690 Brassica napus HOM05D000463 ORTHO05D004638 2.4e-06 56.2 64 62.5


User provided reference genes

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