Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2433 Utricularia gibba HOM05D005446 ORTHO05D006597 6.0e-106 387.5 192 100.0
Oeu029325.1 Olea europaea HOM05D005446 ORTHO05D006597 1.0e-65 253.8 155 80.0
Migut.F00126 Erythranthe guttata HOM05D005446 ORTHO05D006597 3.9e-65 251.9 155 78.7
MSTRG.26955 Avicennia marina HOM05D005446 ORTHO05D006597 4.3e-64 248.4 155 79.4
Dinv17279 Davidia involucrata HOM05D005446 ORTHO05D006597 6.3e-63 244.6 155 77.4
COL.COLO4_20178 Corchorus olitorius HOM05D005446 ORTHO05D006597 2.4e-62 242.7 155 73.5
Haze_23920 Corylus avellana HOM05D005446 ORTHO05D006597 3.1e-62 242.3 155 76.1
Haze_00330 Corylus avellana HOM05D005446 ORTHO05D006597 4.1e-62 241.9 155 76.1
Potri.015G001200 Populus trichocarpa HOM05D005446 ORTHO05D006597 5.3e-62 241.5 155 76.8
Cfa016130 Carpinus fangiana HOM05D005446 ORTHO05D006597 1.2e-61 240.4 155 75.5
Lj3A584T51 Lonicera japonica HOM05D005446 ORTHO05D006597 1.2e-61 240.4 156 73.7
Sopen01g002260 Solanum pennellii HOM05D005446 ORTHO05D006597 1.2e-61 240.4 155 72.9
Duzib151G0274 Durio zibethinus HOM05D005446 ORTHO05D006597 1.5e-61 240.0 155 73.5
TAR383G0718 Trochodendron aralioides HOM05D005446 ORTHO05D006597 2.0e-61 239.6 155 72.9
Actinidia08718 Actinidia chinensis HOM05D005446 ORTHO05D006597 2.6e-61 239.2 155 75.5
CiPaw.06G038600 Carya illinoinensis HOM05D005446 ORTHO05D006597 2.6e-61 239.2 155 74.2
Thecc.04G200100 Theobroma cacao HOM05D005446 ORTHO05D006597 3.4e-61 238.8 155 72.9
CSS0004780 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 5.9e-61 238.0 155 74.8
Manes.18G108200 Manihot esculenta HOM05D005446 ORTHO05D006597 5.9e-61 238.0 155 74.8
Peaxi162Scf00192g00016 Petunia axillaris HOM05D005446 ORTHO05D006597 1.0e-60 237.3 155 73.5
Rhsim03G0218300 Rhododendron simsii HOM05D005446 ORTHO05D006597 1.0e-60 237.3 155 75.5
Atru.chr12.2505 Acer truncatum HOM05D005446 ORTHO05D006597 1.3e-60 236.9 155 72.3
vmacro06473 Vaccinium macrocarpon HOM05D005446 ORTHO05D006597 1.7e-60 236.5 155 73.5
Atru.chr12.2528 Acer truncatum HOM05D005446 ORTHO05D006597 2.9e-60 235.7 155 71.6
Peaxi162Scf00038g02639 Petunia axillaris HOM05D005446 ORTHO05D006597 2.9e-60 235.7 155 72.9
MBI12_g19204_MAGBIO Magnolia biondii HOM05D005446 ORTHO05D006597 3.8e-60 235.3 155 73.5
Sabra15G0000700 Salix brachista HOM05D005446 ORTHO05D006597 3.8e-60 235.3 155 74.2
GSVIVG01038676001 Vitis vinifera HOM05D005446 ORTHO05D006597 3.8e-60 235.3 155 72.3
Eucgr.K00475 Eucalyptus grandis HOM05D005446 ORTHO05D006597 5.0e-60 235.0 156 72.4
Nn1g09694 Nelumbo nucifera HOM05D005446 ORTHO05D006597 5.0e-60 235.0 155 72.3
PGSC0003DMG400032145 Solanum tuberosum HOM05D005446 ORTHO05D006597 5.0e-60 235.0 155 71.0
QL09p006048 Quercus lobata HOM05D005446 ORTHO05D006597 6.5e-60 234.6 154 72.7
Eucgr.K00477 Eucalyptus grandis HOM05D005446 ORTHO05D006597 8.5e-60 234.2 155 71.6
SGA_v2.0_scaffold44G16871 Striga asiatica HOM05D005446 ORTHO05D006597 1.1e-59 233.8 174 68.4
Lj1A1031T79 Lonicera japonica HOM05D005446 ORTHO05D006597 1.4e-59 233.4 155 72.3
Potri.015G001000 Populus trichocarpa HOM05D005446 ORTHO05D006597 3.2e-59 232.3 155 74.2
Eucgr.L02508 Eucalyptus grandis HOM05D005446 ORTHO05D006597 4.2e-59 231.9 155 71.6
Cc02_g16080 Coffea canephora HOM05D005446 ORTHO05D006597 9.4e-59 230.7 155 74.2
Gohir.D07G001000 Gossypium hirsutum HOM05D005446 ORTHO05D006597 9.4e-59 230.7 155 70.3
Gorai.001G114700 Gossypium raimondii HOM05D005446 ORTHO05D006597 1.6e-58 229.9 155 70.3
Gohir.A07G102600 Gossypium hirsutum HOM05D005446 ORTHO05D006597 2.7e-58 229.2 155 69.7
Gorai.001G000500 Gossypium raimondii HOM05D005446 ORTHO05D006597 4.6e-58 228.4 155 69.7
Hund09744 Selenicereus undatus HOM05D005446 ORTHO05D006597 4.6e-58 228.4 155 71.0
LjContig00155g0018941 Lotus japonicus HOM05D005446 ORTHO05D006597 6.1e-58 228.0 155 71.6
AUR62028113 Chenopodium quinoa HOM05D005446 ORTHO05D006597 1.0e-57 227.3 155 67.7
AUR62005952 Chenopodium quinoa HOM05D005446 ORTHO05D006597 2.3e-57 226.1 155 67.7
EL10Ac3g05135 Beta vulgaris HOM05D005446 ORTHO05D006597 3.0e-57 225.7 155 68.4
CSS0007128 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 3.9e-57 225.3 156 71.2
CSS0045409 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 3.9e-57 225.3 156 71.2
CAN.G140.1 Capsicum annuum HOM05D005446 ORTHO05D006597 3.9e-57 225.3 155 69.7
TWI18G0511 Tripterygium wilfordii HOM05D005446 ORTHO05D006597 5.1e-57 224.9 155 68.4
Glyma.14G188600 Glycine max HOM05D005446 ORTHO05D006597 6.7e-57 224.6 155 69.7
Gohir.D07G106600 Gossypium hirsutum HOM05D005446 ORTHO05D006597 6.7e-57 224.6 155 69.0
Cpa.g.sc3.182 Carica papaya HOM05D005446 ORTHO05D006597 1.1e-56 223.8 155 68.4
Solyc01g006260.4 Solanum lycopersicum HOM05D005446 ORTHO05D006597 1.5e-56 223.4 145 72.4
Glyma.02G221100 Glycine max HOM05D005446 ORTHO05D006597 2.5e-56 222.6 155 68.4
Ciclev10006132m.g Citrus clementina HOM05D005446 ORTHO05D006597 3.3e-56 222.2 155 69.7
PSO782G3129 Papaver somniferum HOM05D005446 ORTHO05D006597 1.3e-55 220.3 155 68.4
Gohir.A03G015000 Gossypium hirsutum HOM05D005446 ORTHO05D006597 1.7e-55 219.9 155 69.7
CDE07G1092 Ceratophyllum demersum HOM05D005446 ORTHO05D006597 2.2e-55 219.5 155 65.8
DCAR_008034 Daucus carota HOM05D005446 ORTHO05D006597 2.8e-55 219.2 153 70.6
PSO170G1626 Papaver somniferum HOM05D005446 ORTHO05D006597 2.8e-55 219.2 155 67.7
FAN01G0680 Fragaria x ananassa HOM05D005446 ORTHO05D006597 6.3e-55 218.0 155 67.7
TAR629G0354 Trochodendron aralioides HOM05D005446 ORTHO05D006597 8.2e-55 217.6 145 72.4
ECA247G1253 Erigeron canadensis HOM05D005446 ORTHO05D006597 1.1e-54 217.2 155 67.1
FAN10G1830 Fragaria x ananassa HOM05D005446 ORTHO05D006597 1.4e-54 216.9 155 67.1
ClCG09G010380 Citrullus lanatus HOM05D005446 ORTHO05D006597 1.8e-54 216.5 155 69.0
FvH4_7g33290 Fragaria vesca HOM05D005446 ORTHO05D006597 1.8e-54 216.5 155 67.1
FAN03G2203 Fragaria x ananassa HOM05D005446 ORTHO05D006597 3.1e-54 215.7 155 67.1
Medtr5g068650 Medicago truncatula HOM05D005446 ORTHO05D006597 3.1e-54 215.7 154 69.5
Phvul.001G010300 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 3.1e-54 215.7 155 67.7
Phvul.008G188200 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 3.1e-54 215.7 155 67.7
CANSAT64G2376 Cannabis sativa HOM05D005446 ORTHO05D006597 9.1e-54 214.2 155 68.4
RcHm_v2.0_Chr1g0383271 Rosa chinensis HOM05D005446 ORTHO05D006597 9.1e-54 214.2 155 67.1
CsaV3_7G024240 Cucumis sativus L. HOM05D005446 ORTHO05D006597 1.2e-53 213.8 155 69.0
HanXRQChr02g0037361 Helianthus annuus HOM05D005446 ORTHO05D006597 1.2e-53 213.8 184 61.4
Phvul.L008700 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 1.5e-53 213.4 155 67.1
Nitab4.5_0005132g0070 Nicotiana tabacum HOM05D005446 ORTHO05D006597 2.0e-53 213.0 146 70.5
MELO3C023673.2 Cucumis melo HOM05D005446 ORTHO05D006597 2.6e-53 212.6 155 68.4
Sed0027394 Sechium edule HOM05D005446 ORTHO05D006597 2.6e-53 212.6 155 67.7
Phvul.003G000356 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 3.4e-53 212.2 155 67.1
Aqoxy5G00887 Aquilegia oxysepala HOM05D005446 ORTHO05D006597 4.5e-53 211.8 152 66.4
Lalb_Chr10g0102991 Lupinus albus HOM05D005446 ORTHO05D006597 4.5e-53 211.8 155 65.8
Prupe.2G321800 Prunus persica HOM05D005446 ORTHO05D006597 4.5e-53 211.8 155 65.2
ATR0579G170 Amborella trichopoda HOM05D005446 ORTHO05D006597 5.9e-53 211.5 147 68.0
Ca_05549_v3 Cicer arietinum L. HOM05D005446 ORTHO05D006597 1.0e-52 210.7 154 66.2
MD07G1303100 Malus domestica HOM05D005446 ORTHO05D006597 1.7e-52 209.9 155 65.2
Aa31LG10G6780 Aethionema arabicum HOM05D005446 ORTHO05D006597 2.2e-52 209.5 154 68.2
Ah.13g071020 Amaranthus hybridus HOM05D005446 ORTHO05D006597 5.0e-52 208.4 214 52.3
Nitab4.5_0022559g0010 Nicotiana tabacum HOM05D005446 ORTHO05D006597 5.0e-52 208.4 127 77.2
Lsat_1_v5_gn_1_26901 Lactuca sativa HOM05D005446 ORTHO05D006597 6.5e-52 208.0 155 67.1
Zm00001eb200370 Zea mays HOM05D005446 ORTHO05D006597 1.4e-51 206.8 153 65.4
AL1G14320 Arabidopsis lyrata HOM05D005446 ORTHO05D006597 1.9e-51 206.5 157 68.8
Carub.0001s0387 Capsella rubella HOM05D005446 ORTHO05D006597 2.5e-51 206.1 157 68.8
HanXRQChr02g0037371 Helianthus annuus HOM05D005446 ORTHO05D006597 5.5e-51 204.9 150 66.0
CARHR003990 Cardamine hirsuta HOM05D005446 ORTHO05D006597 1.2e-50 203.8 157 67.5
VMungo0647G1380 Vigna mungo HOM05D005446 ORTHO05D006597 1.6e-50 203.4 147 67.3
RcHm_v2.0_Chr3g0479561 Rosa chinensis HOM05D005446 ORTHO05D006597 3.6e-50 202.2 155 64.5
AT1G04635 Arabidopsis thaliana HOM05D005446 ORTHO05D006597 4.7e-50 201.8 157 67.5
DCAR_019328 Daucus carota HOM05D005446 ORTHO05D006597 1.0e-49 200.7 131 74.8
Eucgr.K00052 Eucalyptus grandis HOM05D005446 ORTHO05D006597 3.9e-49 198.7 150 66.0
MD01G1231100 Malus domestica HOM05D005446 ORTHO05D006597 2.0e-48 196.4 147 64.6
TPR.G5849 Trifolium pratense HOM05D005446 ORTHO05D006597 2.0e-48 196.4 154 63.6
Thhalv10009004m.g Eutrema salsugineum HOM05D005446 ORTHO05D006597 4.4e-48 195.3 157 65.0
Eucgr.K00059 Eucalyptus grandis HOM05D005446 ORTHO05D006597 7.4e-48 194.5 150 65.3
Os04g0295100 Oryza sativa ssp. japonica HOM05D005446 ORTHO05D006597 1.7e-47 193.4 163 62.0
HPP92_023794 Vanilla planifolia HOM05D005446 ORTHO05D006597 1.7e-47 193.4 155 58.7
Os05g0270500 Oryza sativa ssp. japonica HOM05D005446 ORTHO05D006597 1.1e-46 190.7 148 62.8
THA.LOC104820657 Tarenaya hassleriana HOM05D005446 ORTHO05D006597 1.4e-46 190.3 157 62.4
QL04p035447 Quercus lobata HOM05D005446 ORTHO05D006597 3.1e-46 189.1 136 67.6
PGR142G4477 Punica granatum HOM05D005446 ORTHO05D006597 2.9e-44 182.6 153 57.5
MD07G1302900 Malus domestica HOM05D005446 ORTHO05D006597 5.0e-44 181.8 155 59.4
A10p03070 Brassica napus HOM05D002401 ORTHO05D007109 1.4e-43 180.3 155 58.1
BolC5t29066H Brassica oleracea HOM05D002401 ORTHO05D007109 1.9e-43 179.9 155 58.1
SHI13471 Sapria himalayana HOM05D005446 ORTHO05D006597 2.5e-43 179.5 188 50.5
C05p02830 Brassica napus HOM05D002401 ORTHO05D007109 5.5e-43 178.3 155 57.4
Sp4g14630 Schrenkiella parvula HOM05D005446 ORTHO05D006597 5.5e-43 178.3 152 58.6
BraA10t42580Z Brassica rapa HOM05D002401 ORTHO05D007109 9.4e-43 177.6 155 57.4
Thhalv10017414m.g Eutrema salsugineum HOM05D005446 ORTHO05D006597 6.1e-42 174.9 129 65.9
Sp1g03470 Schrenkiella parvula HOM05D005446 ORTHO05D006597 3.0e-41 172.6 154 56.5
Psat2g060440 Pisum sativum HOM05D005446 ORTHO05D006597 2.8e-39 166.0 148 57.4
TAR362G0055 Trochodendron aralioides HOM05D005446 ORTHO05D006597 1.1e-38 164.1 114 69.3
Sc13g0010680 Simmondsia chinensis HOM05D005446 ORTHO05D006597 8.5e-36 154.5 111 68.5
Ciclev10023849m.g Citrus clementina HOM05D005446 ORTHO05D006597 1.9e-35 153.3 103 68.0
arahy.Tifrunner.gnm1.ann1.G1Q0KH Arachis hypogaea HOM05D005446 ORTHO05D006597 1.6e-34 150.2 106 65.1
SEGI_01150 Sequoiadendron giganteum HOM05D005446 ORTHO05D006597 2.7e-34 149.4 144 48.6
arahy.Tifrunner.gnm1.ann1.PTVQ9K Arachis hypogaea HOM05D005446 ORTHO05D006597 4.7e-34 148.7 106 64.2
FAN10G3034 Fragaria x ananassa HOM05D005446 ORTHO05D006597 9.7e-32 141.0 100 67.0
QL09p006020 Quercus lobata HOM05D005446 ORTHO05D006597 1.7e-31 140.2 91 73.6
Oeu055421.1 Olea europaea HOM05D005446 ORTHO05D006597 1.4e-30 137.1 109 63.3
CDE05G0789 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 4.5e-29 132.1 147 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1519 Anthoceros agrestis HOM05D005446 ORTHO05D006597 2.5e-27 126.3 148 43.9
Pp3c14_9250 Physcomitrium patens HOM05D005446 ORTHO05D006597 2.5e-27 126.3 140 48.6
QL09p006057 Quercus lobata HOM05D000605 ORTHO05D001937 2.1e-26 123.2 80 72.5
TPR.G27917 Trifolium pratense HOM05D005446 ORTHO05D006597 4.4e-24 115.5 158 44.9
SMO356G0648 Selaginella moellendorffii HOM05D005446 ORTHO05D006597 5.9e-21 105.1 153 37.9
Mapoly0096s0024 Marchantia polymorpha HOM05D005446 ORTHO05D006597 1.4e-17 94.0 128 37.5
Phvul.003G000382 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 7.5e-16 88.2 61 68.9
Phvul.L006525 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 7.5e-16 88.2 61 68.9
Cre01.g026100 Chlamydomonas reinhardtii HOM05D005446 ORTHO05D006597 4.9e-15 85.5 129 38.0
Phvul.L004350 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 1.1e-14 84.3 68 61.8
Psat2g148960 Pisum sativum HOM05D005446 ORTHO05D006597 1.8e-14 83.6 49 77.6
MELO3C018158.2 Cucumis melo HOM05D005446 ORTHO05D006597 9.2e-14 81.3 68 60.3
MCO15G566 Micromonas commoda HOM05D005446 ORTHO05D006597 6.8e-09 65.1 118 30.5


User provided reference genes

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