Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2363 Utricularia gibba HOM05D001927 ORTHO05D001972 5.5e-110 401.0 203 100.0
unitig_746.g26874 Utricularia gibba HOM05D001927 ORTHO05D001972 5.9e-19 98.6 238 34.9
Oeu062475.1 Olea europaea HOM05D001927 ORTHO05D001972 3.8e-18 95.9 257 32.7
COL.COLO4_17934 Corchorus olitorius HOM05D001927 ORTHO05D001972 8.5e-18 94.7 236 35.6
Thecc.01G006700 Theobroma cacao HOM05D001927 ORTHO05D001972 3.6e-16 89.4 258 32.9
MSTRG.19947 Avicennia marina HOM05D001927 ORTHO05D001972 2.3e-15 86.7 236 34.3
Migut.N01352 Erythranthe guttata HOM05D001927 ORTHO05D001972 2.3e-15 86.7 254 31.1
TAR628G0768 Trochodendron aralioides HOM05D001927 ORTHO05D001972 2.3e-15 86.7 259 31.7
MSTRG.5470 Avicennia marina HOM05D001927 ORTHO05D001972 3.9e-15 85.9 251 30.3
Actinidia20567 Actinidia chinensis HOM05D001927 ORTHO05D001972 8.8e-15 84.7 255 31.8
Manes.02G113000 Manihot esculenta HOM05D001927 ORTHO05D001972 8.8e-15 84.7 257 33.1
Gohir.A01G174800 Gossypium hirsutum HOM05D001927 ORTHO05D001972 1.5e-14 84.0 264 29.9
VMungo0251G2413 Vigna mungo HOM05D001927 ORTHO05D001972 1.5e-14 84.0 256 33.2
arahy.Tifrunner.gnm1.ann1.4G73DJ Arachis hypogaea HOM05D001927 ORTHO05D001972 2.0e-14 83.6 253 32.8
arahy.Tifrunner.gnm1.ann1.JPCM7H Arachis hypogaea HOM05D001927 ORTHO05D001972 2.0e-14 83.6 253 32.8
Gohir.A03G209500 Gossypium hirsutum HOM05D001927 ORTHO05D001972 2.5e-14 83.2 256 31.6
GSVIVG01023890001 Vitis vinifera HOM05D001927 ORTHO05D001972 2.5e-14 83.2 255 32.2
Gorai.005G258800 Gossypium raimondii HOM05D001927 ORTHO05D001972 3.3e-14 82.8 256 30.9
Gohir.D02G231200 Gossypium hirsutum HOM05D001927 ORTHO05D001972 4.3e-14 82.4 256 32.0
PGR142G3843 Punica granatum HOM05D001927 ORTHO05D001972 4.3e-14 82.4 262 34.0
Sed0025489 Sechium edule HOM05D001927 ORTHO05D001972 4.3e-14 82.4 248 32.3
Gorai.003G002900 Gossypium raimondii HOM05D001927 ORTHO05D001972 5.7e-14 82.0 253 30.4
SGA_v2.0_scaffold58G20317 Striga asiatica HOM05D001927 ORTHO05D001972 9.7e-14 81.3 163 35.0
CiPaw.05G091600 Carya illinoinensis HOM05D001927 ORTHO05D001972 1.3e-13 80.9 258 31.0
Oeu051846.1 Olea europaea HOM05D001927 ORTHO05D001972 3.7e-13 79.3 254 29.5
MSTRG.2741 Avicennia marina HOM05D001927 ORTHO05D001972 4.8e-13 79.0 259 30.9
Duzib187G0987 Durio zibethinus HOM05D001927 ORTHO05D001972 4.8e-13 79.0 258 29.5
Actinidia35679 Actinidia chinensis HOM05D001927 ORTHO05D001972 8.2e-13 78.2 236 31.8
Glyma.16G118400 Glycine max HOM05D001927 ORTHO05D001972 1.1e-12 77.8 256 30.9
Manes.01G154200 Manihot esculenta HOM05D001927 ORTHO05D001972 1.4e-12 77.4 254 31.1
Peaxi162Scf00580g00419 Petunia axillaris HOM05D001927 ORTHO05D001972 1.4e-12 77.4 254 31.9
Sc18g0005990 Simmondsia chinensis HOM05D001927 ORTHO05D001972 1.4e-12 77.4 256 28.9
TWI31G0016 Tripterygium wilfordii HOM05D001927 ORTHO05D001972 1.4e-12 77.4 260 30.8
Actinidia18003 Actinidia chinensis HOM05D001927 ORTHO05D001972 1.8e-12 77.0 250 31.6
DCAR_015664 Daucus carota HOM05D001927 ORTHO05D001972 1.8e-12 77.0 264 29.5
Sabra09G0129800 Salix brachista HOM05D001927 ORTHO05D001972 1.8e-12 77.0 257 31.1
TWI75G1468 Tripterygium wilfordii HOM05D001927 ORTHO05D001972 1.8e-12 77.0 259 31.3
TAR376G0846 Trochodendron aralioides HOM05D001927 ORTHO05D001972 2.4e-12 76.6 259 30.9
Cfa007067 Carpinus fangiana HOM05D001927 ORTHO05D001972 3.1e-12 76.3 260 30.4
Ciclev10025307m.g Citrus clementina HOM05D001927 ORTHO05D001972 3.1e-12 76.3 258 30.2
CsaV3_3G000340 Cucumis sativus L. HOM05D001927 ORTHO05D001972 4.1e-12 75.9 249 30.5
Glyma.02G041700 Glycine max HOM05D001927 ORTHO05D001972 4.1e-12 75.9 256 30.5
THA.LOC104807401 Tarenaya hassleriana HOM05D001927 ORTHO05D001972 5.3e-12 75.5 253 29.6
arahy.Tifrunner.gnm1.ann1.IUYP8I Arachis hypogaea HOM05D001927 ORTHO05D001972 6.9e-12 75.1 241 33.2
arahy.Tifrunner.gnm1.ann1.P0RRHQ Arachis hypogaea HOM05D001927 ORTHO05D001972 6.9e-12 75.1 241 33.2
FvH4_2g16610 Fragaria vesca HOM05D001927 ORTHO05D001972 6.9e-12 75.1 255 30.6
Cpa.g.sc20.203 Carica papaya HOM05D001927 ORTHO05D001972 9.1e-12 74.7 261 30.7
TPR.G18300 Trifolium pratense HOM05D001927 ORTHO05D001972 9.1e-12 74.7 244 33.2
TWI79G0496 Tripterygium wilfordii HOM05D001927 ORTHO05D001972 9.1e-12 74.7 264 32.6
Duzib248G1388 Durio zibethinus HOM05D001927 ORTHO05D001972 1.2e-11 74.3 260 28.1
FAN15G2394 Fragaria x ananassa HOM05D001927 ORTHO05D001972 1.2e-11 74.3 258 30.2
Sopen03g006010 Solanum pennellii HOM05D001927 ORTHO05D001972 1.5e-11 73.9 260 32.3
Gohir.D01G165900 Gossypium hirsutum HOM05D001927 ORTHO05D001972 2.0e-11 73.6 261 28.4
Nn6g31721 Nelumbo nucifera HOM05D001927 ORTHO05D001972 2.0e-11 73.6 257 30.0
Haze_03670 Corylus avellana HOM05D001927 ORTHO05D001972 2.6e-11 73.2 261 29.1
Gohir.A02G177200 Gossypium hirsutum HOM05D001927 ORTHO05D001972 2.6e-11 73.2 246 32.1
Sed0007443 Sechium edule HOM05D001927 ORTHO05D001972 2.6e-11 73.2 244 30.7
Hund00361 Selenicereus undatus HOM05D001927 ORTHO05D001972 2.6e-11 73.2 251 27.9
Nitab4.5_0005297g0060 Nicotiana tabacum HOM05D001927 ORTHO05D001972 4.5e-11 72.4 256 30.1
Peaxi162Scf01446g00004 Petunia axillaris HOM05D001927 ORTHO05D001972 4.5e-11 72.4 250 31.6
Cpa.g.sc535.2 Carica papaya HOM05D001927 ORTHO05D001972 5.9e-11 72.0 260 30.8
Ca_22419_v3 Cicer arietinum L. HOM05D001927 ORTHO05D001972 5.9e-11 72.0 250 31.2
Peaxi162Scf00442g00029 Petunia axillaris HOM05D001927 ORTHO05D001972 5.9e-11 72.0 257 31.9
PSO210G3733 Papaver somniferum HOM05D001927 ORTHO05D001972 1.0e-10 71.2 260 30.8
Potri.009G166000 Populus trichocarpa HOM05D001927 ORTHO05D001972 1.0e-10 71.2 259 30.5
CAN.G354.18 Capsicum annuum HOM05D001927 ORTHO05D001972 1.7e-10 70.5 255 31.0
AT2G17200 Arabidopsis thaliana HOM05D001927 ORTHO05D001972 2.2e-10 70.1 254 28.7
MELO3C013728.2 Cucumis melo HOM05D001927 ORTHO05D001972 2.2e-10 70.1 264 28.8
Glyma.11G084700 Glycine max HOM05D001927 ORTHO05D001972 2.2e-10 70.1 247 32.4
Lj2g0024598 Lotus japonicus HOM05D001927 ORTHO05D001972 2.2e-10 70.1 242 31.4
Phvul.002G115300 Phaseolus vulgaris HOM05D001927 ORTHO05D001972 2.2e-10 70.1 243 31.7
VMungo1215G1850 Vigna mungo HOM05D001927 ORTHO05D001972 2.2e-10 70.1 243 32.1
CANSAT25G0497 Cannabis sativa HOM05D001927 ORTHO05D001972 2.9e-10 69.7 258 30.2
CiPaw.06G116800 Carya illinoinensis HOM05D001927 ORTHO05D001972 2.9e-10 69.7 257 28.0
Eucgr.I01516 Eucalyptus grandis HOM05D001927 ORTHO05D001972 2.9e-10 69.7 250 30.0
Nitab4.5_0006877g0010 Nicotiana tabacum HOM05D001927 ORTHO05D001972 2.9e-10 69.7 250 30.8
Phvul.003G269300 Phaseolus vulgaris HOM05D001927 ORTHO05D001972 2.9e-10 69.7 255 31.4
Solyc03g032160.3 Solanum lycopersicum HOM05D001927 ORTHO05D001972 2.9e-10 69.7 260 31.5
Zm00001eb022400 Zea mays HOM05D001927 ORTHO05D001972 3.8e-10 69.3 111 36.9
Duzib147G0366 Durio zibethinus HOM05D001927 ORTHO05D001972 5.0e-10 68.9 260 30.4
Eucgr.G01858 Eucalyptus grandis HOM05D001927 ORTHO05D001972 5.0e-10 68.9 247 26.7
Glyma.01G159500 Glycine max HOM05D001927 ORTHO05D001972 5.0e-10 68.9 247 31.6
Hund06166 Selenicereus undatus HOM05D001927 ORTHO05D001972 5.0e-10 68.9 253 29.6
Gorai.002G206400 Gossypium raimondii HOM05D001927 ORTHO05D001972 8.5e-10 68.2 261 27.6
PSO675G1621 Papaver somniferum HOM05D001927 ORTHO05D001972 8.5e-10 68.2 255 30.6
Psat4g104080 Pisum sativum HOM05D001927 ORTHO05D001972 8.5e-10 68.2 248 31.9
CARHR293500 Cardamine hirsuta HOM05D001927 ORTHO05D001972 1.1e-09 67.8 261 28.0
FAN27G0140 Fragaria x ananassa HOM05D001927 ORTHO05D001972 1.4e-09 67.4 291 27.8
Gohir.D04G170400 Gossypium hirsutum HOM05D001927 ORTHO05D001972 1.9e-09 67.0 260 28.5
ClCG10G000310 Citrullus lanatus HOM05D001927 ORTHO05D001972 2.5e-09 66.6 238 30.3
Lalb_Chr05g0211891 Lupinus albus HOM05D001927 ORTHO05D001972 2.5e-09 66.6 250 31.2
Nitab4.5_0000467g0010 Nicotiana tabacum HOM05D001927 ORTHO05D001972 2.5e-09 66.6 278 28.8
Nitab4.5_0000495g0160 Nicotiana tabacum HOM05D001927 ORTHO05D001972 2.5e-09 66.6 256 30.5
Nitab4.5_0000702g0110 Nicotiana tabacum HOM05D001927 ORTHO05D001972 2.5e-09 66.6 263 32.3
Potri.004G205100 Populus trichocarpa HOM05D001927 ORTHO05D001972 2.5e-09 66.6 261 29.9
Ca_24968_v3 Cicer arietinum L. HOM05D001927 ORTHO05D001972 3.2e-09 66.2 250 30.8
Zm00001eb402540 Zea mays HOM05D001927 ORTHO05D001972 3.2e-09 66.2 250 27.6
CSS0019927 Camellia sinensis var. sinensis HOM05D001927 ORTHO05D001972 4.2e-09 65.9 259 29.3
TAR625G1397 Trochodendron aralioides HOM05D001927 ORTHO05D001972 4.2e-09 65.9 261 27.6
CsaV3_7G001800 Cucumis sativus L. HOM05D001927 ORTHO05D001972 5.5e-09 65.5 258 28.7
HanXRQChr15g0476471 Helianthus annuus HOM05D001927 ORTHO05D001972 5.5e-09 65.5 238 26.9
CSS0009793 Camellia sinensis var. sinensis HOM05D001927 ORTHO05D001972 7.2e-09 65.1 261 31.0
FAN24G0005 Fragaria x ananassa HOM05D001927 ORTHO05D001972 9.4e-09 64.7 285 26.7
PSO541G2185 Papaver somniferum HOM05D001927 ORTHO05D001972 1.2e-08 64.3 253 30.0
Oeu021982.1 Olea europaea HOM05D001927 ORTHO05D001972 1.6e-08 63.9 300 25.7
AL3G50060 Arabidopsis lyrata HOM05D001927 ORTHO05D001972 2.7e-08 63.2 251 28.7
Duzib132G0855 Durio zibethinus HOM05D001927 ORTHO05D001972 2.7e-08 63.2 237 30.8
FAN20G1284 Fragaria x ananassa HOM05D001927 ORTHO05D001972 2.7e-08 63.2 270 28.1
Lj4g0010573 Lotus japonicus HOM05D001927 ORTHO05D001972 2.7e-08 63.2 240 30.8
Prupe.8G178100 Prunus persica HOM05D001927 ORTHO05D001972 2.7e-08 63.2 254 29.9
Carub.0003s3114 Capsella rubella HOM05D001927 ORTHO05D001972 3.6e-08 62.8 267 28.8
Dinv41880 Davidia involucrata HOM05D001927 ORTHO05D001972 4.7e-08 62.4 258 29.5
MD10G1139400 Malus domestica HOM05D001927 ORTHO05D001972 4.7e-08 62.4 246 29.3
Duzib052G0080 Durio zibethinus HOM05D001927 ORTHO05D001972 6.1e-08 62.0 262 29.0
Migut.B00013 Erythranthe guttata HOM05D001927 ORTHO05D001972 6.1e-08 62.0 255 27.5
MBI05_g12023_MAGBIO Magnolia biondii HOM05D001927 ORTHO05D001972 6.1e-08 62.0 222 28.4
Os10g0542200 Oryza sativa ssp. japonica HOM05D001927 ORTHO05D001972 6.1e-08 62.0 111 35.1
ClCG02G003510 Citrullus lanatus HOM05D001927 ORTHO05D001972 7.9e-08 61.6 258 28.7
Hma1.2p1_0032F.1_g018830 Hydrangea macrophylla HOM05D001927 ORTHO05D001972 7.9e-08 61.6 265 28.7
Lalb_Chr16g0377241 Lupinus albus HOM05D001927 ORTHO05D001972 7.9e-08 61.6 250 30.4
Sc08g0002320 Simmondsia chinensis HOM05D001927 ORTHO05D001972 7.9e-08 61.6 195 30.8
Actinidia17381 Actinidia chinensis HOM05D001927 ORTHO05D001972 1.4e-07 60.8 257 29.6
BcaNung00611 Brassica carinata HOM05D001927 ORTHO05D001972 1.4e-07 60.8 198 30.3
DCAR_006288 Daucus carota HOM05D001927 ORTHO05D001972 1.4e-07 60.8 252 27.8
Dinv08525 Davidia involucrata HOM05D001927 ORTHO05D001972 1.4e-07 60.8 259 29.0
Thecc.02G044900 Theobroma cacao HOM05D001927 ORTHO05D001972 1.4e-07 60.8 265 27.2
COL.COLO4_22541 Corchorus olitorius HOM05D001927 ORTHO05D001972 1.8e-07 60.5 254 28.3
Zm00001eb002530 Zea mays HOM05D001927 ORTHO05D001972 2.3e-07 60.1 203 29.1
BcaB03g16466 Brassica carinata HOM05D001927 ORTHO05D001972 3.0e-07 59.7 264 26.9
Os03g0131300 Oryza sativa ssp. japonica HOM05D001927 ORTHO05D001972 3.0e-07 59.7 249 28.9
AUR62011703 Chenopodium quinoa HOM05D001927 ORTHO05D001972 3.9e-07 59.3 262 27.5
AUR62012926 Chenopodium quinoa HOM05D001927 ORTHO05D001972 3.9e-07 59.3 262 27.5
Gohir.A12G033500 Gossypium hirsutum HOM05D001927 ORTHO05D001972 3.9e-07 59.3 233 27.9
Cc07_g11700 Coffea canephora HOM05D001927 ORTHO05D001972 8.8e-07 58.2 261 27.2
Prupe.7G181000 Prunus persica HOM05D001927 ORTHO05D001972 8.8e-07 58.2 247 28.7
QL11p055900 Quercus lobata HOM05D001927 ORTHO05D001972 8.8e-07 58.2 258 27.5
Zm00001eb393840 Zea mays HOM05D001927 ORTHO05D001972 8.8e-07 58.2 110 35.5
MD05G1134300 Malus domestica HOM05D001927 ORTHO05D001972 1.1e-06 57.8 244 27.0
MD15G1232900 Malus domestica HOM05D001927 ORTHO05D001972 1.1e-06 57.8 267 28.1
AL3G50050 Arabidopsis lyrata HOM05D001927 ORTHO05D001972 1.5e-06 57.4 247 27.1
Sabra04G0138400 Salix brachista HOM05D001927 ORTHO05D001972 1.5e-06 57.4 274 28.8
Hma1.2p1_0271F.1_g108910 Hydrangea macrophylla HOM05D001927 ORTHO05D001972 2.0e-06 57.0 156 33.3
Pp3c4_6720 Physcomitrium patens HOM05D001927 ORTHO05D001972 2.0e-06 57.0 259 27.0
Pp3c4_6722 Physcomitrium patens HOM05D001927 ORTHO05D001972 2.0e-06 57.0 259 27.0
THA.LOC104819722 Tarenaya hassleriana HOM05D001927 ORTHO05D001972 2.0e-06 57.0 249 31.3
HPP92_002452 Vanilla planifolia HOM05D001927 ORTHO05D001972 2.6e-06 56.6 248 28.6
HanXRQChr17g0544001 Helianthus annuus HOM05D001927 ORTHO05D001972 3.3e-06 56.2 240 26.2
Oeu053044.3 Olea europaea HOM05D001927 ORTHO05D001972 3.3e-06 56.2 107 34.6
Sp7g33070 Schrenkiella parvula HOM05D001927 ORTHO05D001972 3.3e-06 56.2 259 25.9
CDE05G0952 Ceratophyllum demersum HOM05D001927 ORTHO05D001972 4.4e-06 55.8 256 28.9
MELO3C013259.2 Cucumis melo HOM05D001927 ORTHO05D001972 4.4e-06 55.8 258 28.3
Gorai.012G158800 Gossypium raimondii HOM05D001927 ORTHO05D001972 4.4e-06 55.8 260 25.8
Medtr5g023830 Medicago truncatula HOM05D001927 ORTHO05D001972 4.4e-06 55.8 244 29.1
QL11p055598 Quercus lobata HOM05D001927 ORTHO05D001972 4.4e-06 55.8 275 27.3
PGSC0003DMG400001571 Solanum tuberosum HOM05D001927 ORTHO05D001972 4.4e-06 55.8 259 27.0
HPP92_022691 Vanilla planifolia HOM05D001927 ORTHO05D001972 4.4e-06 55.8 253 27.3
Atru.chr5.3550 Acer truncatum HOM05D001927 ORTHO05D001972 5.7e-06 55.5 233 28.3
C01p03620 Brassica napus HOM05D001927 ORTHO05D001972 5.7e-06 55.5 151 32.5
Rhsim11G0197000 Rhododendron simsii HOM05D001927 ORTHO05D001972 5.7e-06 55.5 255 27.8
Gohir.D12G039300 Gossypium hirsutum HOM05D001927 ORTHO05D001972 7.4e-06 55.1 262 26.7
Gorai.008G041000 Gossypium raimondii HOM05D001927 ORTHO05D001972 7.4e-06 55.1 262 26.7
TPR.G25116 Trifolium pratense HOM05D001927 ORTHO05D001972 7.4e-06 55.1 251 28.3
Medtr8g073920 Medicago truncatula HOM05D001927 ORTHO05D001972 9.7e-06 54.7 244 31.1


User provided reference genes

Program Settings