Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 2.4e-179 632.1 329 100.0
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 5.7e-80 302.0 356 54.2
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 1.0e-76 291.2 356 52.0
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 4.2e-75 285.8 337 53.1
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 1.6e-74 283.9 337 54.9
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 7.4e-72 275.0 355 49.9
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 1.4e-70 270.8 348 50.0
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 1.0e-68 264.6 338 51.2
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 2.2e-68 263.5 338 47.9
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 6.5e-68 261.9 342 50.3
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 1.1e-67 261.2 336 48.8
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 2.5e-67 260.0 339 49.6
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 3.2e-67 259.6 348 48.3
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 1.6e-66 257.3 347 48.4
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 2.1e-66 256.9 348 48.6
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 1.8e-65 253.8 348 48.0
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 2.3e-65 253.4 336 48.5
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.0e-65 253.1 344 48.5
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 3.9e-65 252.7 368 47.8
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 6.7e-65 251.9 338 47.3
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 8.8e-65 251.5 336 46.7
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 1.1e-64 251.1 348 46.8
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 1.5e-64 250.8 351 47.0
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 2.0e-64 250.4 350 47.4
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 2.6e-64 250.0 346 46.2
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 4.4e-64 249.2 340 48.5
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 7.4e-64 248.4 338 48.8
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 9.7e-64 248.1 353 47.9
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.8e-63 246.5 338 48.2
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.1e-62 244.6 340 47.9
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 1.1e-62 244.6 345 47.0
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 4.1e-62 242.7 333 46.5
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 7.0e-62 241.9 357 45.7
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 9.1e-62 241.5 421 41.8
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 2.6e-61 240.0 336 46.4
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 2.6e-61 240.0 338 47.9
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 3.4e-61 239.6 335 48.7
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.5e-61 239.2 336 49.1
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 7.7e-61 238.4 371 45.6
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 1.0e-60 238.0 336 47.0
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 1.3e-60 237.7 339 48.4
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 1.3e-60 237.7 335 47.8
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 2.9e-60 236.5 345 46.1
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 2.9e-60 236.5 353 45.9
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 3.8e-60 236.1 400 42.0
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 8.5e-60 235.0 310 47.1
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 8.5e-60 235.0 350 45.4
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 1.9e-59 233.8 334 46.1
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.5e-59 232.3 360 44.7
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 5.5e-59 232.3 334 45.8
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 7.2e-59 231.9 338 45.9
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 9.4e-59 231.5 350 44.9
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 4.7e-58 229.2 306 46.1
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 4.7e-58 229.2 300 47.3
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 8.0e-58 228.4 388 40.7
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 3.0e-57 226.5 392 42.1
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 3.0e-57 226.5 329 46.2
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.1e-56 224.6 336 46.7
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 2.0e-56 223.8 334 44.3
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 5.7e-56 222.2 293 48.5
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 1.3e-55 221.1 329 45.6
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.9e-53 212.2 356 43.0
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 7.7e-53 211.8 383 39.4
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 6.5e-52 208.8 320 46.2
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 1.1e-51 208.0 348 40.5
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 2.5e-51 206.8 337 43.3
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 4.2e-51 206.1 346 41.3
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 5.5e-51 205.7 381 38.3
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 4.7e-50 202.6 300 46.0
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 6.1e-50 202.2 369 39.0
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 5.2e-49 199.1 299 44.8
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 8.8e-49 198.4 385 41.6
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 2.0e-48 197.2 296 45.6
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 2.6e-48 196.8 338 42.6
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 4.8e-47 192.6 336 41.4
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 2.0e-45 187.2 384 38.5
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 4.5e-45 186.0 246 50.8
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 2.9e-44 183.3 326 41.1
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.5e-43 179.1 273 45.4
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 9.4e-43 178.3 420 34.3
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 1.6e-42 177.6 302 40.7
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 1.2e-40 171.4 334 36.8
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.0e-40 170.6 282 44.0
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 2.6e-40 170.2 264 43.2
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 2.6e-40 170.2 264 43.2
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 9.8e-40 168.3 384 34.1
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 6.3e-39 165.6 372 36.8
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.4e-38 164.5 258 43.8
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 1.8e-38 164.1 399 35.1
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 2.4e-38 163.7 270 43.0
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 9.1e-38 161.8 158 60.1
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 2.0e-37 160.6 427 32.3
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 4.5e-37 159.5 381 34.4
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 5.9e-37 159.1 271 41.7
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 1.3e-36 157.9 260 40.4
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 2.3e-36 157.1 381 34.4
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 3.8e-36 156.4 301 38.5
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 1.1e-35 154.8 334 36.5
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 1.2e-34 151.4 274 41.2
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 1.2e-34 151.4 274 41.2
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 1.6e-34 151.0 269 39.4
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 8.9e-33 145.2 290 37.6
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 4.4e-32 142.9 201 45.8
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.1e-30 136.7 177 50.8
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 5.4e-30 136.0 199 42.2
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 1.0e-28 131.7 228 41.7
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 1.7e-28 131.0 270 37.0
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 5.6e-27 125.9 157 50.3
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.1e-26 122.5 138 54.3
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 1.4e-25 121.3 274 35.4
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 6.8e-25 119.0 275 35.6
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 9.8e-24 115.2 150 47.3
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 7.0e-22 109.0 153 43.1
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 3.5e-21 106.7 137 48.9
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 3.9e-20 103.2 105 56.2
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 2.5e-19 100.5 155 42.6
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 2.5e-19 100.5 114 54.4
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.6e-18 97.8 109 55.0
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.6e-18 97.8 109 55.0
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 8.0e-18 95.5 81 60.5
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 8.0e-18 95.5 79 62.0
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 4.0e-17 93.2 133 46.6
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.9e-15 86.3 82 56.1
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 1.3e-12 78.2 128 37.5
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.6e-10 71.2 138 37.7
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.7e-07 61.2 62 56.5
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.7e-07 61.2 62 56.5


User provided reference genes

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