Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g156 Utricularia gibba HOM05D003682 ORTHO05D004224 1.5e-62 242.7 118 100.0
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 6.2e-37 157.5 109 70.6
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 8.1e-37 157.1 109 71.6
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 8.4e-34 147.1 109 64.2
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 1.1e-33 146.7 109 65.1
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 1.6e-32 142.9 109 62.4
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 2.1e-32 142.5 109 62.4
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 2.7e-32 142.1 110 61.8
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 1.3e-31 139.8 109 62.4
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 1.3e-31 139.8 109 60.6
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 1.7e-31 139.4 109 61.5
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 1.7e-31 139.4 109 59.6
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 3.0e-31 138.7 109 62.4
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 3.0e-31 138.7 109 62.4
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 3.9e-31 138.3 109 62.4
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 6.6e-31 137.5 109 61.5
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 1.1e-30 136.7 109 63.3
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.1e-30 136.7 109 61.5
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 1.5e-30 136.3 109 60.6
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 1.5e-30 136.3 109 61.5
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 2.5e-30 135.6 109 61.5
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 3.3e-30 135.2 109 57.8
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 3.3e-30 135.2 109 58.7
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 3.3e-30 135.2 109 59.6
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 3.3e-30 135.2 109 58.7
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 4.3e-30 134.8 109 58.7
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 4.3e-30 134.8 109 59.6
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 1.2e-29 133.3 109 63.3
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.1e-29 132.5 110 59.1
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 2.1e-29 132.5 109 57.8
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 2.1e-29 132.5 109 59.6
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 6.2e-29 131.0 110 60.0
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 8.1e-29 130.6 109 57.8
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 1.4e-28 129.8 109 59.6
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 1.8e-28 129.4 111 56.8
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 4.0e-28 128.3 109 60.6
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 6.9e-28 127.5 109 59.6
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 6.9e-28 127.5 109 56.9
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 8.9e-28 127.1 109 58.7
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 1.2e-27 126.7 109 56.9
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 1.5e-27 126.3 109 58.7
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 1.5e-27 126.3 109 55.0
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 2.0e-27 125.9 109 56.9
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 2.6e-27 125.6 109 56.9
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 3.4e-27 125.2 109 57.8
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 7.6e-27 124.0 109 56.9
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 7.6e-27 124.0 109 58.7
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 9.9e-27 123.6 109 55.0
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 1.3e-26 123.2 109 56.9
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 1.7e-26 122.9 109 56.0
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 1.7e-26 122.9 109 56.9
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 2.2e-26 122.5 109 55.0
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 2.9e-26 122.1 110 52.7
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.9e-26 122.1 109 56.0
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 2.9e-26 122.1 109 56.0
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 2.9e-26 122.1 127 51.2
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 2.9e-26 122.1 109 56.9
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 2.9e-26 122.1 109 57.8
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 3.8e-26 121.7 110 53.6
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 3.8e-26 121.7 109 56.9
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 3.8e-26 121.7 108 55.6
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 4.9e-26 121.3 109 56.0
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 4.9e-26 121.3 109 58.7
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 6.4e-26 120.9 109 56.0
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 8.4e-26 120.6 109 55.0
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 8.4e-26 120.6 109 55.0
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 8.4e-26 120.6 109 55.0
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 8.4e-26 120.6 109 55.0
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 8.4e-26 120.6 109 58.7
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 1.1e-25 120.2 109 59.6
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 1.1e-25 120.2 109 56.9
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 1.1e-25 120.2 109 54.1
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 1.4e-25 119.8 109 55.0
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 1.9e-25 119.4 109 55.0
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 1.9e-25 119.4 109 54.1
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.9e-25 119.4 110 57.3
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 1.9e-25 119.4 109 55.0
GSVIVG01009190001 Vitis vinifera HOM05D003682 ORTHO05D004224 1.9e-25 119.4 101 58.4
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 3.2e-25 118.6 109 55.0
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 3.2e-25 118.6 109 53.2
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 5.4e-25 117.9 108 54.6
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 7.1e-25 117.5 110 56.4
Lalb_Chr04g0252801 Lupinus albus HOM05D003682 ORTHO05D004224 7.1e-25 117.5 109 54.1
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 7.1e-25 117.5 110 54.5
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 9.3e-25 117.1 109 53.2
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 9.3e-25 117.1 109 56.0
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 1.2e-24 116.7 109 53.2
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 1.2e-24 116.7 109 57.8
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 1.6e-24 116.3 109 51.4
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 2.1e-24 115.9 109 53.2
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 2.1e-24 115.9 110 55.5
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 2.1e-24 115.9 139 45.3
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 4.6e-24 114.8 110 55.5
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 4.6e-24 114.8 109 55.0
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 6.0e-24 114.4 109 51.4
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 1.3e-23 113.2 109 53.2
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 3.9e-23 111.7 109 53.2
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 3.9e-23 111.7 104 55.8
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 5.1e-23 111.3 109 52.3
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 1.1e-22 110.2 118 50.8
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 1.1e-22 110.2 103 55.3
BcaNung04806 Brassica carinata HOM05D003682 ORTHO05D004224 1.5e-22 109.8 109 49.5
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 2.5e-22 109.0 107 50.5
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 3.3e-22 108.6 109 50.5
CSS0023594 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 7.3e-22 107.5 98 55.1
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 9.6e-22 107.1 111 52.3
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.3e-21 106.7 109 51.4
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 1.6e-21 106.3 101 52.5
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.8e-21 105.5 111 52.3
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 2.8e-21 105.5 109 49.5
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 3.6e-21 105.1 98 51.0
SEGI_24080 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 8.1e-21 104.0 109 51.4
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.1e-20 103.6 109 53.2
SHI09561 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-20 102.1 109 48.6
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 3.1e-20 102.1 109 48.6
AT5G41820 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 1.2e-19 100.1 109 47.7
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 1.5e-19 99.8 109 48.6
CSS0005132 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.8e-19 97.8 97 53.6
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 5.8e-19 97.8 112 46.4
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 9.9e-19 97.1 139 43.9
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 4.9e-18 94.7 103 46.6
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 4.9e-18 94.7 93 48.4
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 5.4e-17 91.3 108 43.5
HanXRQChr08g0233491 Helianthus annuus HOM05D003682 ORTHO05D004224 1.6e-16 89.7 109 45.9
EL10Ac3g05976 Beta vulgaris HOM05D003682 ORTHO05D004224 2.1e-16 89.4 70 54.3
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 2.1e-16 89.4 118 44.1
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 3.0e-15 85.5 118 45.8
SMO307G0051 Selaginella moellendorffii HOM05D003682 ORTHO05D004224 3.9e-15 85.1 108 43.5
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 1.5e-14 83.2 111 40.5
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 9.6e-14 80.5 110 44.5
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 1.6e-13 79.7 70 54.3
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 8.1e-13 77.4 78 53.8
BcaB06g27567 Brassica carinata HOM05D003682 ORTHO05D004224 9.0e-12 73.9 97 40.2
PRCOL_00003254 Prasinoderma coloniale HOM05D003682 ORTHO05D004224 3.9e-07 58.5 112 35.7
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 9.6e-06 53.9 70 40.0


User provided reference genes

Program Settings