Gene: PGSC0003DMG400009355

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400009355
  • Transcript Identifier PGSC0003DMT400024213
  • Gene Type Coding gene
  • Location ST4.03ch04 : 65085146-65091857 : positive

Gene Family Information

  • ID HOM05D003682
  • #Genes/#Species 186/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37476021
  • id PGSC0003DMG400009355.v4.03
  • uniprot M1AJN8

Descriptions

  • Description Rab geranylgeranyl transferase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0018342
IEA
GOA Databaseprotein prenylation
GO:0018342
IEA
InterProprotein prenylation
GO:0018344
IBA
GOA Databaseprotein geranylgeranylation
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G24490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008318
IEA
GOA Databaseprotein prenyltransferase activity
GO:0008318
IEA
InterProprotein prenyltransferase activity
GO:0004663
IBA
GOA DatabaseRab geranylgeranyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005968
IBA
GOA DatabaseRab-protein geranylgeranyltransferase complex
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G24490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002088 Protein prenyltransferase, alpha subunit
IPR032675 Leucine-rich repeat domain superfamily
Mapman id Description
22.3.4.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.subunit alpha