Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1186 Utricularia gibba HOM05D003625 ORTHO05D004382 0.0e+00 1499.2 804 100.0
MSTRG.18201 Avicennia marina HOM05D003625 ORTHO05D004382 2.0e-235 819.7 909 53.8
SGA_v2.0_scaffold1G00428 Striga asiatica HOM05D003625 ORTHO05D004382 2.3e-228 796.2 918 51.6
SalBow3G1663 Salvia bowleyana HOM05D003625 ORTHO05D004382 1.7e-223 780.0 891 52.2
Oeu022807.1 Olea europaea HOM05D003625 ORTHO05D004382 9.5e-214 747.7 900 50.4
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 5.5e-169 599.0 943 40.8
Nitab4.5_0001651g0100 Nicotiana tabacum HOM05D003625 ORTHO05D004382 1.1e-164 584.7 906 41.3
Solyc09g074330.3 Solanum lycopersicum HOM05D003625 ORTHO05D004382 1.4e-161 574.3 942 41.3
Sopen09g029170 Solanum pennellii HOM05D003625 ORTHO05D004382 1.4e-161 574.3 948 41.4
CAN.G426.9 Capsicum annuum HOM05D003625 ORTHO05D004382 4.3e-158 562.8 906 41.2
CANSAT25G1777 Cannabis sativa HOM05D003625 ORTHO05D004382 1.2e-155 554.7 938 37.8
Cfa011439 Carpinus fangiana HOM05D003625 ORTHO05D004382 1.2e-155 554.7 950 38.7
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 1.2e-155 554.7 932 39.6
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 7.7e-155 552.0 909 41.7
Nitab4.5_0010231g0010 Nicotiana tabacum HOM05D003625 ORTHO05D004382 3.8e-154 549.7 910 40.2
COL.COLO4_09853 Corchorus olitorius HOM05D003625 ORTHO05D004382 6.5e-154 548.9 904 39.0
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 2.5e-153 547.0 817 42.4
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 9.4e-153 545.0 893 41.2
Cc01_g20080 Coffea canephora HOM05D003625 ORTHO05D004382 1.2e-152 544.7 904 39.0
Thecc.07G010400 Theobroma cacao HOM05D003625 ORTHO05D004382 2.1e-152 543.9 909 39.2
Potri.014G135700 Populus trichocarpa HOM05D003625 ORTHO05D004382 1.1e-150 538.1 942 38.3
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 1.5e-150 537.7 909 38.2
Prupe.8G250800 Prunus persica HOM05D003625 ORTHO05D004382 1.5e-150 537.7 944 37.6
Duzib213G0855 Durio zibethinus HOM05D003625 ORTHO05D004382 2.0e-150 537.3 822 40.9
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 2.6e-150 537.0 909 38.2
GSVIVG01011024001 Vitis vinifera HOM05D003625 ORTHO05D004382 3.3e-150 536.6 919 39.6
TWI59G0316 Tripterygium wilfordii HOM05D003625 ORTHO05D004382 4.4e-150 536.2 918 39.3
TAR365G1186 Trochodendron aralioides HOM05D003625 ORTHO05D004382 1.4e-148 531.2 990 37.3
RcHm_v2.0_Chr6g0292351 Rosa chinensis HOM05D003625 ORTHO05D004382 9.1e-148 528.5 933 37.9
MD02G1277900 Malus domestica HOM05D003625 ORTHO05D004382 3.5e-147 526.6 850 39.6
Gohir.A04G004900 Gossypium hirsutum HOM05D003625 ORTHO05D004382 1.3e-146 524.6 909 37.6
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 1.5e-145 521.2 947 37.9
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 2.5e-145 520.4 860 40.2
QL93p2003_0013 Quercus lobata HOM05D003625 ORTHO05D004382 9.4e-145 518.5 833 40.1
EL10Ac7g17149 Beta vulgaris HOM05D003625 ORTHO05D004382 8.0e-144 515.4 937 38.2
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 6.3e-141 505.8 921 38.3
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 1.4e-140 504.6 908 37.8
Cpa.g.sc60.39 Carica papaya HOM05D003625 ORTHO05D004382 4.1e-140 503.1 948 37.1
Aqoxy2G00575 Aquilegia oxysepala HOM05D003625 ORTHO05D004382 5.3e-140 502.7 947 35.6
PGR044G2464 Punica granatum HOM05D003625 ORTHO05D004382 3.5e-139 500.0 931 37.6
FvH4_2g24490 Fragaria vesca HOM05D003625 ORTHO05D004382 7.7e-139 498.8 983 35.3
Sabra14G0102100 Salix brachista HOM05D003625 ORTHO05D004382 7.7e-139 498.8 1017 35.2
Lj2A1183G17 Lonicera japonica HOM05D003625 ORTHO05D004382 2.9e-138 496.9 984 35.9
QL12p023448 Quercus lobata HOM05D003625 ORTHO05D004382 2.9e-138 496.9 826 39.3
CsaV3_1G033940 Cucumis sativus L. HOM05D003625 ORTHO05D004382 3.8e-138 496.5 922 37.4
VMungo1080G0322 Vigna mungo HOM05D003625 ORTHO05D004382 1.1e-137 495.0 938 36.2
Eucgr.C03805 Eucalyptus grandis HOM05D003625 ORTHO05D004382 9.4e-137 491.9 947 37.0
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 3.0e-135 486.9 829 38.8
FAN24G2516 Fragaria x ananassa HOM05D003625 ORTHO05D004382 4.0e-135 486.5 889 36.9
arahy.Tifrunner.gnm1.ann1.E19P6N Arachis hypogaea HOM05D003625 ORTHO05D004382 8.8e-135 485.3 954 36.4
Peaxi162Scf00006g03621 Petunia axillaris HOM05D003625 ORTHO05D004382 1.2e-134 485.0 901 38.3
arahy.Tifrunner.gnm1.ann1.6HBC95 Arachis hypogaea HOM05D003625 ORTHO05D004382 2.0e-134 484.2 946 36.5
FAN20G2140 Fragaria x ananassa HOM05D003625 ORTHO05D004382 2.6e-134 483.8 892 36.7
CiPaw.08G101000 Carya illinoinensis HOM05D003625 ORTHO05D004382 5.7e-134 482.6 830 38.2
Phvul.L001843 Phaseolus vulgaris HOM05D003625 ORTHO05D004382 5.7e-134 482.6 951 36.2
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 9.8e-134 481.9 852 38.7
Glyma.15G042000 Glycine max HOM05D003625 ORTHO05D004382 2.2e-133 480.7 960 36.2
Lj3g0001853 Lotus japonicus HOM05D003625 ORTHO05D004382 3.1e-132 476.9 941 35.9
Lalb_Chr22g0350011 Lupinus albus HOM05D003625 ORTHO05D004382 4.1e-132 476.5 909 36.5
Potri.002G213400 Populus trichocarpa HOM05D003625 ORTHO05D004382 1.2e-131 474.9 794 40.1
FAN27G0529 Fragaria x ananassa HOM05D003625 ORTHO05D004382 5.0e-130 469.5 892 36.0
Glyma.13G332300 Glycine max HOM05D003625 ORTHO05D004382 5.0e-130 469.5 954 35.6
FAN15G0592 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.5e-129 468.0 915 36.0
Duzib268G0343 Durio zibethinus HOM05D003625 ORTHO05D004382 2.1e-128 464.2 796 38.1
Sabra02G0149300 Salix brachista HOM05D003625 ORTHO05D004382 1.0e-127 461.8 781 39.6
CiPaw.13G100200 Carya illinoinensis HOM05D003625 ORTHO05D004382 1.2e-126 458.4 773 38.3
HanXRQChr06g0164001 Helianthus annuus HOM05D003625 ORTHO05D004382 2.8e-125 453.8 887 35.3
DCAR_002782 Daucus carota HOM05D003625 ORTHO05D004382 4.9e-125 453.0 916 35.7
Psat5g282480 Pisum sativum HOM05D003625 ORTHO05D004382 5.4e-124 449.5 950 34.6
Ca_19197_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 7.0e-124 449.1 815 37.5
ECA236G1413 Erigeron canadensis HOM05D003625 ORTHO05D004382 9.1e-124 448.7 893 35.3
Ca_01352_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 1.2e-123 448.4 925 34.8
DCAR_005834 Daucus carota HOM05D003625 ORTHO05D004382 1.2e-123 448.4 912 35.5
HanXRQChr05g0150041 Helianthus annuus HOM05D003625 ORTHO05D004382 1.2e-123 448.4 907 34.7
Lj3g0005082 Lotus japonicus HOM05D003625 ORTHO05D004382 2.5e-121 440.7 899 34.7
MBI19_g35956_MAGBIO Magnolia biondii HOM05D003625 ORTHO05D004382 4.2e-121 439.9 900 35.2
Medtr4g063030 Medicago truncatula HOM05D003625 ORTHO05D004382 4.7e-120 436.4 926 34.6
TPR.G1039 Trifolium pratense HOM05D003625 ORTHO05D004382 1.0e-119 435.3 937 34.0
Haze_04796 Corylus avellana HOM05D003625 ORTHO05D004382 1.4e-119 434.9 886 35.0
Medtr2g096290 Medicago truncatula HOM05D003625 ORTHO05D004382 4.9e-117 426.4 839 36.2
ATR0626G050 Amborella trichopoda HOM05D003625 ORTHO05D004382 1.6e-115 421.4 946 34.0
AUR62034443 Chenopodium quinoa HOM05D003625 ORTHO05D004382 2.7e-115 420.6 849 36.9
Nn3g21233 Nelumbo nucifera HOM05D003625 ORTHO05D004382 3.9e-114 416.8 789 36.2
THA.LOC104801203 Tarenaya hassleriana HOM05D003625 ORTHO05D004382 1.1e-113 415.2 813 37.0
Aa31LG5G2610 Aethionema arabicum HOM05D003625 ORTHO05D004382 3.1e-111 407.1 838 37.5
Lalb_Chr01g0003851 Lupinus albus HOM05D003625 ORTHO05D004382 8.9e-111 405.6 822 35.8
BcaB01g01939 Brassica carinata HOM05D003625 ORTHO05D004382 7.5e-110 402.5 824 36.7
Psat7g219280 Pisum sativum HOM05D003625 ORTHO05D004382 1.7e-109 401.4 958 33.6
PSO407G0030 Papaver somniferum HOM05D003625 ORTHO05D004382 4.9e-109 399.8 1027 30.4
MELO3C020662.2 Cucumis melo HOM05D003625 ORTHO05D004382 6.4e-109 399.4 1077 31.9
PSO170G6480 Papaver somniferum HOM05D003625 ORTHO05D004382 3.2e-108 397.1 1028 31.0
CDE05G3415 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 5.4e-108 396.4 871 34.4
Thhalv10028409m.g Eutrema salsugineum HOM05D003625 ORTHO05D004382 4.6e-107 393.3 921 35.1
Sp6g03120 Schrenkiella parvula HOM05D003625 ORTHO05D004382 1.3e-106 391.7 835 36.3
Carub.0006s3397 Capsella rubella HOM05D003625 ORTHO05D004382 1.7e-106 391.3 839 36.2
Sed0013189 Sechium edule HOM05D003625 ORTHO05D004382 2.3e-106 391.0 735 36.7
A09p02400 Brassica napus HOM05D003625 ORTHO05D004382 2.5e-105 387.5 826 35.7
AL6G49860 Arabidopsis lyrata HOM05D003625 ORTHO05D004382 3.3e-105 387.1 833 36.6
BcaB01g01983 Brassica carinata HOM05D003625 ORTHO05D004382 1.2e-104 385.2 824 35.4
BolC9t53180H Brassica oleracea HOM05D003625 ORTHO05D004382 1.2e-104 385.2 824 35.4
Lsat_1_v5_gn_8_55721 Lactuca sativa HOM05D003625 ORTHO05D004382 4.7e-104 383.3 749 35.6
Lsat_1_v5_gn_5_189721 Lactuca sativa HOM05D003625 ORTHO05D004382 8.1e-104 382.5 920 32.0
C09p02500 Brassica napus HOM05D003625 ORTHO05D004382 1.4e-103 381.7 824 35.3
BraA09t35887Z Brassica rapa HOM05D003625 ORTHO05D004382 6.8e-103 379.4 847 35.1
AT4G03090 Arabidopsis thaliana HOM05D003625 ORTHO05D004382 8.9e-103 379.0 820 35.5
AUR62028969 Chenopodium quinoa HOM05D003625 ORTHO05D004382 1.5e-97 361.7 841 34.0
Haze_24021 Corylus avellana HOM05D003625 ORTHO05D004382 1.2e-96 358.6 549 41.0
AUR62034599 Chenopodium quinoa HOM05D003625 ORTHO05D004382 2.1e-88 331.3 455 44.8
ClCG03G001700 Citrullus lanatus HOM05D003625 ORTHO05D004382 1.2e-86 325.5 438 45.4
arahy.Tifrunner.gnm1.ann1.TJRY6P Arachis hypogaea HOM05D003625 ORTHO05D004382 6.6e-82 309.7 548 37.0
Zm00001eb165880 Zea mays HOM05D003625 ORTHO05D004382 2.1e-80 304.7 755 31.7
arahy.Tifrunner.gnm1.ann1.L6Y1E3 Arachis hypogaea HOM05D003625 ORTHO05D004382 6.2e-80 303.1 550 36.5
Zm00001eb115600 Zea mays HOM05D003625 ORTHO05D004382 3.1e-79 300.8 656 34.3
Ca_01349_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 2.2e-77 294.7 586 35.3
Mapoly0033s0004 Marchantia polymorpha HOM05D003625 ORTHO05D004382 2.2e-77 294.7 1003 27.7
SHI14627 Sapria himalayana HOM05D003625 ORTHO05D004382 2.4e-76 291.2 906 28.9
Atru.chr5.1298 Acer truncatum HOM05D003625 ORTHO05D004382 3.1e-71 274.2 516 36.6
Pp3c15_10800 Physcomitrium patens HOM05D003625 ORTHO05D004382 1.2e-70 272.3 898 27.6
BraA02t07497Z Brassica rapa HOM05D003625 ORTHO05D004382 7.6e-70 269.6 676 32.4
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 2.2e-69 268.1 590 35.4
Pp3c9_3000 Physcomitrium patens HOM05D003625 ORTHO05D004382 1.1e-68 265.8 898 27.4
Psat5g051000 Pisum sativum HOM05D003625 ORTHO05D004382 1.3e-66 258.8 471 36.3
HPP92_011331 Vanilla planifolia HOM05D003625 ORTHO05D004382 1.8e-66 258.5 434 39.2
CARHR251520 Cardamine hirsuta HOM05D003625 ORTHO05D004382 2.2e-61 241.5 460 37.6
BcaC03g16206 Brassica carinata HOM05D003625 ORTHO05D004382 4.2e-60 237.3 677 30.7
A02p25090 Brassica napus HOM05D003625 ORTHO05D004382 1.0e-58 232.6 762 29.0
C02p39820 Brassica napus HOM05D003625 ORTHO05D004382 3.9e-58 230.7 700 30.3
Atru.chr5.1297 Acer truncatum HOM05D003625 ORTHO05D004382 4.3e-57 227.3 408 38.7
AagrBONN_evm.TU.Sc2ySwM_228.4764 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.4e-55 221.5 956 24.5
Sc17g0003670 Simmondsia chinensis HOM05D003625 ORTHO05D004382 9.0e-55 219.5 247 48.6
SMO271G0139 Selaginella moellendorffii HOM05D003625 ORTHO05D004382 5.9e-54 216.9 915 26.0
BolC2t10009H Brassica oleracea HOM05D003625 ORTHO05D004382 5.0e-53 213.8 531 32.8
Prupe.8G267900 Prunus persica HOM05D003625 ORTHO05D004382 1.1e-49 202.6 296 41.9
CSS0019256 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 1.6e-48 198.7 228 45.6
BcaB05g23686 Brassica carinata HOM05D003625 ORTHO05D004382 1.5e-46 192.2 673 29.3
TPR.G40473 Trifolium pratense HOM05D003625 ORTHO05D004382 2.9e-45 188.0 257 42.4
arahy.Tifrunner.gnm1.ann1.DI3WFZ Arachis hypogaea HOM05D003625 ORTHO05D004382 8.5e-45 186.4 295 43.4
arahy.Tifrunner.gnm1.ann1.AN8C0D Arachis hypogaea HOM05D003625 ORTHO05D004382 2.5e-44 184.9 295 43.1
FvH4_2g24530 Fragaria vesca HOM05D003625 ORTHO05D004382 1.4e-39 169.1 309 36.2
SEGI_20946 Sequoiadendron giganteum HOM05D003625 ORTHO05D004382 3.1e-39 167.9 384 31.2
Sc17g0003680 Simmondsia chinensis HOM05D003625 ORTHO05D004382 3.1e-39 167.9 289 37.4
Haze_24022 Corylus avellana HOM05D003625 ORTHO05D004382 1.6e-35 155.6 409 31.5
TPR.G34306 Trifolium pratense HOM05D003625 ORTHO05D004382 2.7e-35 154.8 325 34.5
CARHR251510 Cardamine hirsuta HOM05D003625 ORTHO05D004382 2.6e-33 148.3 286 36.7
HanXRQChr12g0370811 Helianthus annuus HOM05D003625 ORTHO05D004382 1.3e-32 146.0 318 32.4
TPR.G34304 Trifolium pratense HOM05D003625 ORTHO05D004382 3.5e-30 137.9 277 36.5
CSS0041154 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 1.9e-28 132.1 131 58.0
Hma1.2p1_0358F.1_g134790 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 1.2e-27 129.4 147 53.7
AUR62034492 Chenopodium quinoa HOM05D003625 ORTHO05D004382 3.6e-27 127.9 186 44.1
QL12p023546 Quercus lobata HOM05D003625 ORTHO05D004382 1.1e-25 122.9 143 51.7
HPP92_011330 Vanilla planifolia HOM05D003625 ORTHO05D004382 1.4e-23 115.9 92 60.9
Sc17g0003660 Simmondsia chinensis HOM05D003625 ORTHO05D004382 9.1e-23 113.2 203 40.4
QL12p023490 Quercus lobata HOM05D003625 ORTHO05D004382 3.5e-22 111.3 199 40.2
Hma1.2p1_0111F.1_g053430 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 4.5e-22 110.9 133 45.9
CSS0039297 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 1.5e-20 105.9 156 45.5
Lalb_Chr24g0394281 Lupinus albus HOM05D003625 ORTHO05D004382 2.0e-17 95.5 156 37.2
Ca_31206_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 3.4e-17 94.7 123 47.2
MELO3C022916.2 Cucumis melo HOM05D003625 ORTHO05D004382 1.3e-16 92.8 165 40.6
CDE11G0573 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 8.3e-16 90.1 186 34.9
HanXRQChr12g0370771 Helianthus annuus HOM05D003625 ORTHO05D004382 1.8e-15 89.0 192 33.3
AUR62036671 Chenopodium quinoa HOM05D003625 ORTHO05D004382 4.5e-14 84.3 234 32.9
Zm00001eb115530 Zea mays HOM05D003625 ORTHO05D037860 8.5e-13 80.1 83 49.4
Zm00001eb115560 Zea mays HOM05D003625 ORTHO05D037860 3.2e-12 78.2 82 48.8
SGA_v2.0_scaffold11G05770 Striga asiatica HOM05D005689 ORTHO05D004382 9.5e-12 76.6 195 36.4
TPR.G8723 Trifolium pratense HOM05D000036 ORTHO05D012241 1.2e-11 76.3 82 46.3
SEGI_02434 Sequoiadendron giganteum HOM05D003625 ORTHO05D004382 1.4e-10 72.8 86 47.7
CBR_g32447 Chara braunii HOM05D003625 ORTHO05D004382 4.0e-10 71.2 149 32.2
Hma1.2p1_0358F.1_g134800 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 6.8e-10 70.5 144 35.4
SEGI_15323 Sequoiadendron giganteum HOM05D003625 ORTHO05D004382 8.8e-10 70.1 95 42.1
BolC9t54863H Brassica oleracea HOM05D000096 ORTHO05D000045 2.0e-09 68.9 86 41.9
Zm00001eb115510 Zea mays HOM05D003625 ORTHO05D004382 2.2e-08 65.5 175 31.4
HanXRQChr16g0512981 Helianthus annuus HOM05D003625 ORTHO05D048258 3.1e-07 61.6 54 55.6


User provided reference genes

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