Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1045 Utricularia gibba HOM05D003723 ORTHO05D004306 0.0e+00 1625.9 798 100.0
MSTRG.24381 Avicennia marina HOM05D003723 ORTHO05D004306 9.5e-307 1056.6 828 64.7
SGA_v2.0_scaffold28G11839 Striga asiatica HOM05D003723 ORTHO05D004306 8.6e-300 1033.5 824 63.7
CSS0046104 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 1.5e-283 979.5 830 60.2
Dinv44943 Davidia involucrata HOM05D003723 ORTHO05D004306 9.6e-283 976.9 825 60.0
Lj4A757T32 Lonicera japonica HOM05D003723 ORTHO05D004306 1.8e-276 956.1 832 58.7
Cc10_g05060 Coffea canephora HOM05D003723 ORTHO05D004306 9.6e-275 950.3 827 60.3
SalBow2G1921 Salvia bowleyana HOM05D003723 ORTHO05D004306 9.9e-272 940.3 783 61.8
Cfa013762 Carpinus fangiana HOM05D003723 ORTHO05D004306 1.0e-268 930.2 828 56.5
PGSC0003DMG400011543 Solanum tuberosum HOM05D003723 ORTHO05D004306 6.7e-268 927.5 830 56.6
SGA_v2.0_scaffold152G36813 Striga asiatica HOM05D003723 ORTHO05D004306 1.3e-266 923.3 823 58.1
Nitab4.5_0003725g0010 Nicotiana tabacum HOM05D003723 ORTHO05D004306 8.2e-266 920.6 831 58.5
TWI56G1015 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 8.2e-266 920.6 827 57.4
CiPaw.08G050900 Carya illinoinensis HOM05D003723 ORTHO05D004306 1.1e-265 920.2 828 57.2
QL93p0154_0009 Quercus lobata HOM05D003723 ORTHO05D004306 1.1e-265 920.2 828 58.0
QL12p038269 Quercus lobata HOM05D003723 ORTHO05D004306 1.4e-265 919.8 828 58.0
Nitab4.5_0000497g0070 Nicotiana tabacum HOM05D003723 ORTHO05D004306 1.8e-265 919.5 831 58.7
TAR628G0363 Trochodendron aralioides HOM05D003723 ORTHO05D004306 6.9e-265 917.5 831 57.8
Sopen12g030290 Solanum pennellii HOM05D003723 ORTHO05D004306 4.9e-263 911.4 828 56.0
Potri.002G117500 Populus trichocarpa HOM05D003723 ORTHO05D004306 1.4e-262 909.8 825 57.3
Solyc12g088290.2 Solanum lycopersicum HOM05D003723 ORTHO05D004306 7.1e-262 907.5 828 55.7
DCAR_009874 Daucus carota HOM05D003723 ORTHO05D004306 2.7e-261 905.6 832 55.9
Haze_22418 Corylus avellana HOM05D003723 ORTHO05D004306 3.5e-261 905.2 866 53.9
ECA247G0551 Erigeron canadensis HOM05D003723 ORTHO05D004306 3.5e-261 905.2 823 55.7
Eucgr.F02239 Eucalyptus grandis HOM05D003723 ORTHO05D004306 6.0e-261 904.4 827 55.4
Peaxi162Scf00160g00521 Petunia axillaris HOM05D003723 ORTHO05D004306 7.9e-261 904.0 795 58.6
Nitab4.5_0002314g0030 Nicotiana tabacum HOM05D003723 ORTHO05D004306 1.3e-260 903.3 830 56.3
Manes.02G183600 Manihot esculenta HOM05D003723 ORTHO05D004306 1.8e-260 902.9 827 56.8
TWI12G0955 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 2.3e-260 902.5 821 57.4
Oeu014279.1 Olea europaea HOM05D003723 ORTHO05D004306 5.1e-260 901.4 760 62.0
CiPaw.07G173600 Carya illinoinensis HOM05D003723 ORTHO05D004306 1.1e-259 900.2 834 56.0
HanXRQChr10g0292141 Helianthus annuus HOM05D003723 ORTHO05D004306 1.1e-259 900.2 804 57.1
Prupe.1G421300 Prunus persica HOM05D003723 ORTHO05D004306 4.3e-259 898.3 830 55.9
Lj4C72T17 Lonicera japonica HOM05D003723 ORTHO05D004306 1.6e-258 896.3 830 55.5
Sabra14G0008900 Salix brachista HOM05D003723 ORTHO05D004306 1.6e-258 896.3 822 56.8
CANSAT25G0987 Cannabis sativa HOM05D003723 ORTHO05D004306 2.2e-258 896.0 819 56.3
Sabra02G0092000 Salix brachista HOM05D003723 ORTHO05D004306 2.8e-258 895.6 840 55.6
Potri.014G014900 Populus trichocarpa HOM05D003723 ORTHO05D004306 4.8e-258 894.8 820 56.8
MELO3C016827.2 Cucumis melo HOM05D003723 ORTHO05D004306 1.8e-257 892.9 831 55.2
PGR031G2627 Punica granatum HOM05D003723 ORTHO05D004306 2.4e-257 892.5 827 56.8
Sed0028163 Sechium edule HOM05D003723 ORTHO05D004306 3.1e-257 892.1 828 54.7
ClCG05G020690 Citrullus lanatus HOM05D003723 ORTHO05D004306 5.3e-257 891.3 832 55.6
HanXRQChr10g0292161 Helianthus annuus HOM05D003723 ORTHO05D004306 2.6e-256 889.0 823 55.2
Nitab4.5_0009040g0020 Nicotiana tabacum HOM05D003723 ORTHO05D004306 2.6e-256 889.0 868 53.7
Ciclev10000301m.g Citrus clementina HOM05D003723 ORTHO05D004306 3.4e-256 888.6 827 56.2
Atru.chr13.849 Acer truncatum HOM05D003723 ORTHO05D004306 2.9e-255 885.6 826 56.7
CsaV3_4G035140 Cucumis sativus L. HOM05D003723 ORTHO05D004306 2.9e-255 885.6 831 55.1
PGSC0003DMG401010623 Solanum tuberosum HOM05D003723 ORTHO05D004306 3.8e-255 885.2 826 56.4
Lalb_Chr22g0355711 Lupinus albus HOM05D003723 ORTHO05D004306 1.1e-254 883.6 820 55.4
Peaxi162Scf00081g02729 Petunia axillaris HOM05D003723 ORTHO05D004306 4.2e-254 881.7 877 54.7
Sopen04g031320 Solanum pennellii HOM05D003723 ORTHO05D004306 3.6e-253 878.6 826 55.9
Solyc04g077680.3 Solanum lycopersicum HOM05D003723 ORTHO05D004306 6.1e-253 877.9 826 56.1
Cpa.g.sc142.42 Carica papaya HOM05D003723 ORTHO05D004306 4.5e-248 861.7 837 54.4
Lalb_Chr14g0368121 Lupinus albus HOM05D003723 ORTHO05D004306 8.5e-247 857.4 822 54.1
vmacro16900 Vaccinium macrocarpon HOM05D003723 ORTHO05D004306 2.5e-246 855.9 813 55.1
MD08G1080300 Malus domestica HOM05D003723 ORTHO05D004306 9.4e-246 854.0 837 53.9
MD15G1067400 Malus domestica HOM05D003723 ORTHO05D004306 2.7e-245 852.4 835 53.5
Hma1.2p1_0210F.1_g089420 Hydrangea macrophylla HOM05D003723 ORTHO05D004306 4.4e-243 845.1 719 59.0
AUR62022465 Chenopodium quinoa HOM05D003723 ORTHO05D004306 9.7e-243 844.0 842 52.0
CSS0010741 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 1.7e-242 843.2 708 61.2
Lj5g0007294 Lotus japonicus HOM05D003723 ORTHO05D004306 4.8e-242 841.6 818 54.0
AUR62043254 Chenopodium quinoa HOM05D003723 ORTHO05D004306 4.1e-241 838.6 828 53.0
Sc02g0007980 Simmondsia chinensis HOM05D003723 ORTHO05D004306 1.5e-240 836.6 826 53.4
EL10Ac1g02364 Beta vulgaris HOM05D003723 ORTHO05D004306 2.6e-240 835.9 833 52.5
Thecc.04G063000 Theobroma cacao HOM05D003723 ORTHO05D004306 7.7e-240 834.3 842 53.4
Aqoxy3G00456 Aquilegia oxysepala HOM05D003723 ORTHO05D004306 1.7e-239 833.2 820 52.9
arahy.Tifrunner.gnm1.ann1.82WHW6 Arachis hypogaea HOM05D003723 ORTHO05D004306 3.8e-239 832.0 814 53.1
Glyma.14G089042 Glycine max HOM05D003723 ORTHO05D004306 1.4e-238 830.1 830 51.7
Actinidia10210 Actinidia chinensis HOM05D003723 ORTHO05D004306 4.2e-238 828.6 625 64.8
Gohir.D10G114400 Gossypium hirsutum HOM05D003723 ORTHO05D004306 6.1e-237 824.7 841 52.0
Gorai.011G126100 Gossypium raimondii HOM05D003723 ORTHO05D004306 6.1e-237 824.7 841 52.1
arahy.Tifrunner.gnm1.ann1.YU9IEB Arachis hypogaea HOM05D003723 ORTHO05D004306 5.2e-236 821.6 815 53.6
Sed0011873 Sechium edule HOM05D003723 ORTHO05D004306 5.2e-236 821.6 726 57.3
COL.COLO4_29256 Corchorus olitorius HOM05D003723 ORTHO05D004306 8.8e-236 820.8 811 53.9
PSO541G5768 Papaver somniferum HOM05D003723 ORTHO05D004306 2.6e-235 819.3 827 52.0
Duzib151G0173 Durio zibethinus HOM05D003723 ORTHO05D004306 5.7e-235 818.1 842 52.1
Glyma.17G233900 Glycine max HOM05D003723 ORTHO05D004306 1.3e-234 817.0 834 51.9
RcHm_v2.0_Chr6g0309831 Rosa chinensis HOM05D003723 ORTHO05D004306 8.2e-234 814.3 837 52.7
FvH4_2g32880 Fragaria vesca HOM05D003723 ORTHO05D004306 1.1e-233 813.9 835 52.9
FAN15G1506 Fragaria x ananassa HOM05D003723 ORTHO05D004306 1.8e-233 813.1 836 52.8
FAN24G1723 Fragaria x ananassa HOM05D003723 ORTHO05D004306 1.8e-233 813.1 835 52.8
AL6G41310 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 1.2e-232 810.4 835 51.3
AT4G07410 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 1.6e-232 810.1 836 51.8
Aa31sc622G20 Aethionema arabicum HOM05D003723 ORTHO05D004306 2.0e-232 809.7 838 51.3
FAN20G3047 Fragaria x ananassa HOM05D003723 ORTHO05D004306 2.0e-232 809.7 836 52.4
BraA03t12004Z Brassica rapa HOM05D003723 ORTHO05D004306 4.5e-232 808.5 836 51.8
Gohir.A02G089200 Gossypium hirsutum HOM05D003723 ORTHO05D004306 7.7e-232 807.7 837 51.4
A03p27910 Brassica napus HOM05D003723 ORTHO05D004306 1.0e-231 807.4 836 51.8
Carub.0001s2603 Capsella rubella HOM05D003723 ORTHO05D004306 1.0e-231 807.4 829 51.3
Phvul.001G028900 Phaseolus vulgaris HOM05D003723 ORTHO05D004306 1.0e-231 807.4 840 51.5
VMungo0647G0070 Vigna mungo HOM05D003723 ORTHO05D004306 1.0e-231 807.4 834 51.6
AT1G27470 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 1.7e-231 806.6 829 51.0
CARHR287080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 5.0e-231 805.1 830 51.7
Sp1g23720 Schrenkiella parvula HOM05D003723 ORTHO05D004306 6.5e-231 804.7 824 51.5
Thhalv10028433m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 1.9e-230 803.1 836 50.6
AL1G40900 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 3.2e-230 802.4 834 50.4
BcaB01g02881 Brassica carinata HOM05D003723 ORTHO05D004306 5.5e-230 801.6 836 51.0
BolC3t15689H Brassica oleracea HOM05D003723 ORTHO05D004306 5.5e-230 801.6 834 51.3
C03p33700 Brassica napus HOM05D003723 ORTHO05D004306 7.2e-230 801.2 834 51.3
PSO017G5808 Papaver somniferum HOM05D003723 ORTHO05D004306 1.2e-229 800.4 834 51.9
BcaC05g26751 Brassica carinata HOM05D003723 ORTHO05D004306 1.6e-229 800.0 832 50.7
Thhalv10006817m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 1.6e-229 800.0 836 50.1
Sp6g10450 Schrenkiella parvula HOM05D003723 ORTHO05D004306 2.1e-229 799.7 836 51.2
Carub.0006s2652 Capsella rubella HOM05D003723 ORTHO05D004306 6.1e-229 798.1 835 51.5
BcaC01g04785 Brassica carinata HOM05D003723 ORTHO05D004306 1.4e-228 797.0 835 51.7
Manes.18G095200 Manihot esculenta HOM05D003723 ORTHO05D004306 1.8e-228 796.6 718 57.7
BcaC01g06947 Brassica carinata HOM05D003723 ORTHO05D004306 2.3e-228 796.2 819 50.2
BcaC05g26567 Brassica carinata HOM05D003723 ORTHO05D004306 8.8e-228 794.3 824 51.0
Gohir.D02G112100 Gossypium hirsutum HOM05D003723 ORTHO05D004306 2.0e-227 793.1 837 51.1
Hund05292 Selenicereus undatus HOM05D003723 ORTHO05D004306 2.6e-227 792.7 744 54.6
A08p26240 Brassica napus HOM05D003723 ORTHO05D004306 1.3e-226 790.4 830 50.4
CARHR027080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 1.7e-226 790.0 824 50.0
BraA08t34575Z Brassica rapa HOM05D003723 ORTHO05D004306 4.8e-226 788.5 820 50.6
BcaC01g01603 Brassica carinata HOM05D003723 ORTHO05D004306 4.1e-225 785.4 819 49.8
FAN27G2988 Fragaria x ananassa HOM05D003723 ORTHO05D004306 5.3e-225 785.0 836 51.8
THA.LOC104824968 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 7.0e-225 784.6 840 49.9
Gorai.005G127000 Gossypium raimondii HOM05D003723 ORTHO05D004306 1.2e-224 783.9 865 49.5
C03p74200 Brassica napus HOM05D003723 ORTHO05D004306 7.7e-224 781.2 830 49.2
ATR0739G177 Amborella trichopoda HOM05D003723 ORTHO05D004306 1.3e-223 780.4 839 51.3
DCAR_004814 Daucus carota HOM05D003723 ORTHO05D004306 1.7e-223 780.0 870 49.5
BraA09t39357Z Brassica rapa HOM05D003723 ORTHO05D004306 6.5e-223 778.1 819 50.3
C05p26190 Brassica napus HOM05D003723 ORTHO05D004306 4.2e-222 775.4 821 50.3
BolC5t31333H Brassica oleracea HOM05D003723 ORTHO05D004306 2.1e-221 773.1 809 50.9
DCAR_012822 Daucus carota HOM05D003723 ORTHO05D004306 1.8e-220 770.0 819 51.0
A09p38510 Brassica napus HOM05D003723 ORTHO05D004306 4.4e-219 765.4 810 50.4
Ah.05g167030 Amaranthus hybridus HOM05D003723 ORTHO05D004306 1.7e-215 753.4 764 53.5
THA.LOC104825785 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 3.8e-215 752.3 835 48.3
BolC3t19677H Brassica oleracea HOM05D003723 ORTHO05D004306 2.5e-214 749.6 806 49.0
Os03g0735100 Oryza sativa ssp. japonica HOM05D003723 ORTHO05D004306 2.5e-214 749.6 829 50.5
Aa31LG7G10210 Aethionema arabicum HOM05D003723 ORTHO05D004306 7.2e-214 748.0 835 47.8
GSVIVG01009321001 Vitis vinifera HOM05D003723 ORTHO05D004306 9.5e-214 747.7 827 50.4
Ca_13209_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 2.1e-213 746.5 822 47.3
Psat6g017680 Pisum sativum HOM05D003723 ORTHO05D004306 2.3e-212 743.0 827 49.0
Zm00001eb215430 Zea mays HOM05D003723 ORTHO05D004306 4.1e-209 732.3 830 48.6
Gohir.A10G151900 Gossypium hirsutum HOM05D003723 ORTHO05D004306 3.8e-207 725.7 841 47.7
Zm00001eb056350 Zea mays HOM05D003723 ORTHO05D004306 4.3e-206 722.2 826 47.9
CDE07G0463 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 5.6e-206 721.8 786 48.7
TPR.G12983 Trifolium pratense HOM05D003723 ORTHO05D004306 1.4e-204 717.2 830 46.4
TPR.G32238 Trifolium pratense HOM05D003723 ORTHO05D004306 1.2e-203 714.1 832 49.4
Medtr1g017880 Medicago truncatula HOM05D003723 ORTHO05D004306 8.6e-199 698.0 838 45.8
Medtr8g014080 Medicago truncatula HOM05D003723 ORTHO05D004306 8.0e-197 691.4 808 47.5
HPP92_003353 Vanilla planifolia HOM05D003723 ORTHO05D004306 3.5e-192 676.0 711 51.3
Dinv39214 Davidia involucrata HOM05D003723 ORTHO05D004306 1.3e-157 561.2 422 65.4
Mapoly0027s0127 Marchantia polymorpha HOM05D003723 ORTHO05D004306 2.0e-155 553.9 892 39.1
SMO367G0860 Selaginella moellendorffii HOM05D003723 ORTHO05D004306 8.7e-151 538.5 855 36.4
Ca_23258_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 7.6e-147 525.4 732 42.9
Pp3c22_14490 Physcomitrium patens HOM05D003723 ORTHO05D004306 9.3e-145 518.5 922 36.7
Lsat_1_v5_gn_1_1120 Lactuca sativa HOM05D003723 ORTHO05D004306 3.7e-141 506.5 602 48.8
Pp3c19_13580 Physcomitrium patens HOM05D003723 ORTHO05D004306 2.2e-138 497.3 928 35.2
CBR_g57871 Chara braunii HOM05D003723 ORTHO05D004306 4.4e-126 456.4 908 32.8
SEGI_24646 Sequoiadendron giganteum HOM05D003723 ORTHO05D004306 4.7e-104 383.3 483 43.9
CDE04G2329 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 1.8e-103 381.3 415 48.9
AagrBONN_evm.TU.Sc2ySwM_344.864 Anthoceros agrestis HOM05D003723 ORTHO05D004306 8.6e-98 362.5 640 37.2
DCAR_032227 Daucus carota HOM05D003723 ORTHO05D004306 5.9e-91 339.7 445 44.0
Actinidia19302 Actinidia chinensis HOM05D003723 ORTHO05D004306 1.8e-87 328.2 241 63.9
Oeu036976.1 Olea europaea HOM05D003723 ORTHO05D004306 1.7e-85 321.6 324 54.3
Lsat_1_v5_gn_0_45940 Lactuca sativa HOM05D003723 ORTHO05D004306 6.0e-83 313.2 214 66.8
Pp3c18_6690 Physcomitrium patens HOM05D003723 ORTHO05D004306 5.4e-76 290.0 693 30.6
Actinidia19301 Actinidia chinensis HOM05D003723 ORTHO05D004306 2.0e-70 271.6 307 51.1
DCAR_032226 Daucus carota HOM05D003723 ORTHO05D004306 7.5e-70 269.6 253 55.7
SEGI_10786 Sequoiadendron giganteum HOM05D003723 ORTHO05D004306 8.9e-63 246.1 326 44.8
MCO10G249 Micromonas commoda HOM05D003723 ORTHO05D004306 3.9e-58 230.7 914 24.5
Oeu053086.3 Olea europaea HOM05D003723 ORTHO05D004306 1.3e-53 215.7 238 50.4
Lsat_1_v5_gn_1_440 Lactuca sativa HOM05D003723 ORTHO05D004306 3.9e-50 204.1 271 45.0
Dinv39213 Davidia involucrata HOM05D003723 ORTHO05D004306 3.3e-49 201.1 154 61.7
HanXRQChr14g0443971 Helianthus annuus HOM05D003723 ORTHO05D004306 4.6e-43 180.6 210 47.1
CDE04G2756 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 8.1e-40 169.9 187 47.1
Cre13.g606850 Chlamydomonas reinhardtii HOM05D003723 ORTHO05D004306 1.3e-37 162.5 901 22.6
TAR376G0468 Trochodendron aralioides HOM05D003723 ORTHO05D004306 1.7e-37 162.2 119 63.0
TAR376G0760 Trochodendron aralioides HOM05D003723 ORTHO05D004306 2.3e-34 151.8 103 67.0
PRCOL_00004412 Prasinoderma coloniale HOM05D003723 ORTHO05D004306 1.1e-31 142.9 537 26.8
CSS0021932 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 2.8e-24 118.2 104 53.8
CSS0002287 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 3.7e-24 117.9 104 52.9
CSS0044410 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 4.8e-24 117.5 104 53.8
CSS0047227 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 5.3e-23 114.0 104 52.9
Cfa027112 Carpinus fangiana HOM05D003723 ORTHO05D004306 5.3e-23 114.0 397 26.2
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 1.7e-21 109.0 200 38.5
HanXRQChr15g0495401 Helianthus annuus HOM05D003723 ORTHO05D004306 5.0e-21 107.5 107 53.3
CSS0041779 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 4.2e-20 104.4 98 53.1
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 4.2e-20 104.4 195 41.0
Psat7g031120 Pisum sativum HOM05D003723 ORTHO05D004306 2.5e-17 95.1 90 55.6
Migut.N02791 Erythranthe guttata HOM05D003723 ORTHO05D004306 1.3e-16 92.8 54 75.9
TAR376G0365 Trochodendron aralioides HOM05D003723 ORTHO05D004306 5.5e-12 77.4 46 76.1
CAN.G400.11 Capsicum annuum HOM05D002670 ORTHO05D000002 1.3e-08 66.2 101 39.6
CSS0003704 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 1.8e-07 62.4 104 34.6


User provided reference genes

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