Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.W76PKR Arachis hypogaea HOM05D001008 ORTHO05D000594 5.4e-40 167.2 81 100.0
arahy.Tifrunner.gnm1.ann1.K5WR0Q Arachis hypogaea HOM05D011529 ORTHO05D000594 2.0e-10 68.9 36 88.9
arahy.Tifrunner.gnm1.ann1.TNG32Q Arachis hypogaea HOM05D011529 ORTHO05D000594 2.6e-10 68.6 36 88.9
arahy.Tifrunner.gnm1.ann1.4P3ANK Arachis hypogaea HOM05D011529 ORTHO05D000594 2.4e-08 62.0 36 80.6
arahy.Tifrunner.gnm1.ann1.3P38HT Arachis hypogaea HOM05D001008 ORTHO05D009098 2.7e-07 58.5 29 93.1
arahy.Tifrunner.gnm1.ann1.J24SNI Arachis hypogaea HOM05D001008 ORTHO05D009098 2.7e-07 58.5 29 93.1
arahy.Tifrunner.gnm1.ann1.1AJ3D1 Arachis hypogaea HOM05D001008 ORTHO05D009098 7.8e-07 57.0 28 92.9
BcaB03g11709 Brassica carinata HOM05D001008 ORTHO05D009098 7.8e-07 57.0 29 89.7
BcaC01g00729 Brassica carinata HOM05D001008 ORTHO05D009098 7.8e-07 57.0 29 89.7
BcaC01g00736 Brassica carinata HOM05D001008 ORTHO05D009098 7.8e-07 57.0 29 89.7
A08p15410 Brassica napus HOM05D001008 ORTHO05D009098 7.8e-07 57.0 29 89.7
BraA08t33519Z Brassica rapa HOM05D001008 ORTHO05D009098 7.8e-07 57.0 29 89.7
CSS0020227 Camellia sinensis var. sinensis HOM05D001008 ORTHO05D009098 1.0e-06 56.6 29 89.7
CSS0050006 Camellia sinensis var. sinensis HOM05D001008 ORTHO05D009098 1.0e-06 56.6 29 89.7
Glyma.15G131200 Glycine max HOM05D001008 ORTHO05D009098 1.3e-06 56.2 29 86.2
Lj6g0017297 Lotus japonicus HOM05D001008 ORTHO05D009098 1.3e-06 56.2 29 86.2
Aa31LG6G3000 Aethionema arabicum HOM05D001008 ORTHO05D009098 1.7e-06 55.8 29 86.2
AL7G33220 Arabidopsis lyrata HOM05D001008 ORTHO05D009098 1.7e-06 55.8 29 86.2
AT4G20930 Arabidopsis thaliana HOM05D001008 ORTHO05D009098 1.7e-06 55.8 29 86.2
Carub.0007s2050 Capsella rubella HOM05D001008 ORTHO05D009098 1.7e-06 55.8 29 86.2
CARHR227490 Cardamine hirsuta HOM05D001008 ORTHO05D009098 1.7e-06 55.8 29 86.2
Lalb_Chr20g0120101 Lupinus albus HOM05D001008 ORTHO05D009098 1.7e-06 55.8 28 89.3
Sp7g19010 Schrenkiella parvula HOM05D001008 ORTHO05D009098 1.7e-06 55.8 29 86.2
Thhalv10025955m.g Eutrema salsugineum HOM05D001008 ORTHO05D009098 2.3e-06 55.5 29 86.2
C03p83680 Brassica napus HOM05D001008 ORTHO05D009098 3.0e-06 55.1 29 86.2
BolC3t20647H Brassica oleracea HOM05D001008 ORTHO05D009098 3.0e-06 55.1 29 86.2
Medtr2g030400 Medicago truncatula HOM05D001008 ORTHO05D009098 3.0e-06 55.1 29 82.8
TPR.G26338 Trifolium pratense HOM05D001008 ORTHO05D009098 3.0e-06 55.1 29 82.8
Ca_00850_v3 Cicer arietinum L. HOM05D001008 ORTHO05D009098 3.9e-06 54.7 28 85.7
FAN21G3707 Fragaria x ananassa HOM05D002312 ORTHO05D001614 3.9e-06 54.7 29 86.2
FAN25G1843 Fragaria x ananassa HOM05D002312 ORTHO05D001614 3.9e-06 54.7 29 86.2
MD05G1271700 Malus domestica HOM05D001008 ORTHO05D009098 3.9e-06 54.7 29 86.2
Prupe.4G091300 Prunus persica HOM05D001008 ORTHO05D009098 3.9e-06 54.7 29 86.2
RcHm_v2.0_Chr5g0016441 Rosa chinensis HOM05D001008 ORTHO05D009098 3.9e-06 54.7 29 86.2
Atru.chr10.805 Acer truncatum HOM05D001008 ORTHO05D009098 5.1e-06 54.3 29 86.2
FAN16G1118 Fragaria x ananassa HOM05D002312 ORTHO05D001614 5.1e-06 54.3 29 86.2
EL10Ac8g19545 Beta vulgaris HOM05D001008 ORTHO05D009098 6.6e-06 53.9 29 82.8
Gohir.A03G085101 Gossypium hirsutum HOM05D001008 ORTHO05D009098 6.6e-06 53.9 31 77.4
Duzib235G1260 Durio zibethinus HOM05D001008 ORTHO05D009098 8.6e-06 53.5 29 82.8
FAN11G2615 Fragaria x ananassa HOM05D002312 ORTHO05D001614 8.6e-06 53.5 29 82.8
Glyma.09G025100 Glycine max HOM05D001008 ORTHO05D009098 8.6e-06 53.5 29 82.8
Gohir.D02G105500 Gossypium hirsutum HOM05D001008 ORTHO05D009098 8.6e-06 53.5 29 82.8
Gorai.005G119700 Gossypium raimondii HOM05D001008 ORTHO05D009098 8.6e-06 53.5 29 82.8
THA.LOC104806251 Tarenaya hassleriana HOM05D001008 ORTHO05D009098 8.6e-06 53.5 29 82.8
TAR627G0015 Trochodendron aralioides HOM05D001008 ORTHO05D009098 8.6e-06 53.5 29 82.8
vmacro03375 Vaccinium macrocarpon HOM05D001008 ORTHO05D009098 8.6e-06 53.5 29 82.8


User provided reference genes

Program Settings