Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.T3IE7U Arachis hypogaea HOM05D005180 ORTHO05D006136 6.3e-203 710.7 391 100.0
arahy.Tifrunner.gnm1.ann1.F0IXSY Arachis hypogaea HOM05D005180 ORTHO05D006136 1.1e-109 401.0 235 97.9
arahy.Tifrunner.gnm1.ann1.ZTB6Z9 Arachis hypogaea HOM05D005180 ORTHO05D006136 1.1e-109 401.0 235 97.9
arahy.Tifrunner.gnm1.ann1.ZY7ZXH Arachis hypogaea HOM05D005180 ORTHO05D006136 1.1e-109 401.0 235 98.3
Lalb_Chr20g0121321 Lupinus albus HOM05D005180 ORTHO05D006136 1.6e-94 350.5 236 80.1
Glyma.15G080600 Glycine max HOM05D005180 ORTHO05D006136 1.1e-93 347.8 234 85.5
TPR.G11750 Trifolium pratense HOM05D005180 ORTHO05D006136 1.3e-91 340.9 235 84.3
Ca_00419_v3 Cicer arietinum L. HOM05D005180 ORTHO05D006136 5.0e-91 339.0 234 84.6
VMungo0540G0753 Vigna mungo HOM05D005180 ORTHO05D006136 1.1e-90 337.8 234 85.5
Psat1g199720 Pisum sativum HOM05D005180 ORTHO05D006136 5.5e-90 335.5 235 84.7
Phvul.006G178100 Phaseolus vulgaris HOM05D005180 ORTHO05D006136 7.2e-90 335.1 234 85.0
Glyma.13G232100 Glycine max HOM05D005180 ORTHO05D006136 6.1e-89 332.0 232 83.2
Gorai.003G054000 Gossypium raimondii HOM05D005180 ORTHO05D006136 1.0e-88 331.3 233 79.8
Sabra13G0072900 Salix brachista HOM05D005180 ORTHO05D006136 1.0e-88 331.3 233 74.2
Duzib106G0272 Durio zibethinus HOM05D005180 ORTHO05D006136 2.3e-88 330.1 233 81.5
Gohir.D03G052000 Gossypium hirsutum HOM05D005180 ORTHO05D006136 6.7e-88 328.6 233 79.4
vmacro07270 Vaccinium macrocarpon HOM05D005180 ORTHO05D006136 6.7e-88 328.6 234 73.1
Haze_00396 Corylus avellana HOM05D005180 ORTHO05D006136 1.5e-87 327.4 233 81.5
Potri.013G080200 Populus trichocarpa HOM05D005180 ORTHO05D006136 2.0e-87 327.0 233 73.8
GSVIVG01037378001 Vitis vinifera HOM05D005180 ORTHO05D006136 3.3e-87 326.2 233 79.8
QL09p023193 Quercus lobata HOM05D005180 ORTHO05D006136 1.3e-86 324.3 233 80.3
CiPaw.06G034400 Carya illinoinensis HOM05D005180 ORTHO05D006136 1.7e-86 323.9 232 81.9
Sed0003176 Sechium edule HOM05D005180 ORTHO05D006136 1.7e-86 323.9 232 74.1
ClCG09G016930 Citrullus lanatus HOM05D005180 ORTHO05D006136 3.7e-86 322.8 232 78.4
Medtr2g015520 Medicago truncatula HOM05D005180 ORTHO05D006136 3.7e-86 322.8 234 82.1
Cfa016051 Carpinus fangiana HOM05D005180 ORTHO05D006136 4.8e-86 322.4 233 80.7
Actinidia07010 Actinidia chinensis HOM05D005180 ORTHO05D006136 8.2e-86 321.6 233 79.8
CSS0011166 Camellia sinensis var. sinensis HOM05D005180 ORTHO05D006136 8.2e-86 321.6 233 79.0
Nitab4.5_0000428g0030 Nicotiana tabacum HOM05D005180 ORTHO05D006136 8.2e-86 321.6 243 71.2
CsaV3_2G036420 Cucumis sativus L. HOM05D005180 ORTHO05D006136 1.1e-85 321.2 232 73.3
Solyc01g008990.4 Solanum lycopersicum HOM05D005180 ORTHO05D006136 1.1e-85 321.2 243 74.5
Lj6g0006583 Lotus japonicus HOM05D005180 ORTHO05D006136 1.8e-85 320.5 236 81.8
Thecc.05G216000 Theobroma cacao HOM05D005180 ORTHO05D006136 1.8e-85 320.5 232 80.6
MELO3C021887.2 Cucumis melo HOM05D005180 ORTHO05D006136 3.1e-85 319.7 232 72.8
SalBow6G2568 Salvia bowleyana HOM05D005180 ORTHO05D006136 3.1e-85 319.7 235 79.1
Hma1.2p1_1711F.1_g298680 Hydrangea macrophylla HOM05D005180 ORTHO05D006136 4.1e-85 319.3 233 80.3
Nitab4.5_0002915g0060 Nicotiana tabacum HOM05D005180 ORTHO05D006136 5.3e-85 318.9 243 74.9
Gohir.A02G141500 Gossypium hirsutum HOM05D005180 ORTHO05D006136 6.9e-85 318.5 233 79.0
Rhsim04G0005300 Rhododendron simsii HOM05D005180 ORTHO05D006136 9.1e-85 318.2 233 79.4
COL.COLO4_15239 Corchorus olitorius HOM05D005180 ORTHO05D006136 1.2e-84 317.8 233 79.0
Manes.08G064700 Manihot esculenta HOM05D005180 ORTHO05D006136 1.2e-84 317.8 233 78.1
Dinv35897 Davidia involucrata HOM05D005180 ORTHO05D006136 1.5e-84 317.4 228 78.9
Ciclev10021949m.g Citrus clementina HOM05D005180 ORTHO05D006136 2.0e-84 317.0 242 73.6
Cc01_g07100 Coffea canephora HOM05D005180 ORTHO05D006136 2.0e-84 317.0 233 78.5
Rhsim13G0203300 Rhododendron simsii HOM05D005180 ORTHO05D006136 2.0e-84 317.0 233 78.1
FvH4_2g13990 Fragaria vesca HOM05D005180 ORTHO05D006136 2.6e-84 316.6 233 70.8
PGR004G2116 Punica granatum HOM05D005180 ORTHO05D006136 2.6e-84 316.6 240 71.2
Prupe.8G027400 Prunus persica HOM05D005180 ORTHO05D006136 3.4e-84 316.2 233 72.5
Sopen01g004480 Solanum pennellii HOM05D005180 ORTHO05D006136 3.4e-84 316.2 243 73.7
PGSC0003DMG400022705 Solanum tuberosum HOM05D005180 ORTHO05D006136 3.4e-84 316.2 233 76.4
Duzib177G0947 Durio zibethinus HOM05D005180 ORTHO05D006136 4.5e-84 315.8 233 79.8
MD10G1023900 Malus domestica HOM05D005180 ORTHO05D006136 5.9e-84 315.5 233 72.1
FAN24G0415 Fragaria x ananassa HOM05D005180 ORTHO05D006136 1.0e-83 314.7 233 70.4
FAN27G2246 Fragaria x ananassa HOM05D005180 ORTHO05D006136 1.3e-83 314.3 233 70.0
RcHm_v2.0_Chr6g0275831 Rosa chinensis HOM05D005180 ORTHO05D006136 1.3e-83 314.3 233 71.2
FAN20G0932 Fragaria x ananassa HOM05D005180 ORTHO05D006136 2.2e-83 313.5 233 70.0
MSTRG.18479 Avicennia marina HOM05D005180 ORTHO05D006136 3.8e-83 312.8 233 78.5
Actinidia24488 Actinidia chinensis HOM05D005180 ORTHO05D006136 6.5e-83 312.0 228 80.3
CAN.G714.6 Capsicum annuum HOM05D005180 ORTHO05D006136 6.5e-83 312.0 243 73.3
Eucgr.D02531 Eucalyptus grandis HOM05D005180 ORTHO05D006136 8.5e-83 311.6 199 79.9
Peaxi162Scf00050g01910 Petunia axillaris HOM05D005180 ORTHO05D006136 1.4e-82 310.8 243 72.0
CAN.G1085.4 Capsicum annuum HOM05D005180 ORTHO05D006136 4.2e-82 309.3 233 72.1
FAN15G0398 Fragaria x ananassa HOM05D005180 ORTHO05D006136 4.2e-82 309.3 233 69.5
Aqoxy5G01637 Aquilegia oxysepala HOM05D005180 ORTHO05D006136 2.1e-81 307.0 232 69.0
TAR374G0042 Trochodendron aralioides HOM05D005180 ORTHO05D006136 3.6e-81 306.2 233 76.8
Atru.chr5.727 Acer truncatum HOM05D005180 ORTHO05D006136 4.7e-81 305.8 194 80.9
Sopen11g029830 Solanum pennellii HOM05D005180 ORTHO05D006136 6.1e-81 305.4 234 72.6
SGA_v2.0_scaffold29G12131 Striga asiatica HOM05D005180 ORTHO05D006136 6.1e-81 305.4 235 75.3
Oeu032043.1 Olea europaea HOM05D005180 ORTHO05D006136 7.9e-81 305.1 233 77.3
HanXRQChr01g0020751 Helianthus annuus HOM05D005180 ORTHO05D006136 1.4e-80 304.3 237 70.0
CANSAT56G1354 Cannabis sativa HOM05D005180 ORTHO05D006136 2.3e-80 303.5 232 75.4
Migut.D00701 Erythranthe guttata HOM05D005180 ORTHO05D006136 3.0e-80 303.1 234 76.9
unitig_62.g23868 Utricularia gibba HOM05D005180 ORTHO05D006136 3.0e-80 303.1 239 69.9
unitig_64.g29770 Utricularia gibba HOM05D005180 ORTHO05D006136 3.0e-80 303.1 239 69.9
DCAR_016143 Daucus carota HOM05D005180 ORTHO05D006136 8.8e-80 301.6 233 74.7
Sc24g0001580 Simmondsia chinensis HOM05D005180 ORTHO05D006136 1.1e-79 301.2 234 67.1
PGSC0003DMG400027389 Solanum tuberosum HOM05D005180 ORTHO05D006136 3.3e-79 299.7 233 74.2
ECA240G0118 Erigeron canadensis HOM05D005180 ORTHO05D006136 5.7e-79 298.9 233 68.2
Nitab4.5_0002161g0010 Nicotiana tabacum HOM05D005180 ORTHO05D006136 9.7e-79 298.1 234 71.4
Nn8g41146 Nelumbo nucifera HOM05D005180 ORTHO05D006136 1.3e-78 297.7 231 76.2
EL10Ac6g14989 Beta vulgaris HOM05D005180 ORTHO05D006136 2.2e-78 297.0 234 73.9
Oeu025945.2 Olea europaea HOM05D005180 ORTHO05D006136 4.8e-78 295.8 192 80.2
Nitab4.5_0002567g0080 Nicotiana tabacum HOM05D005180 ORTHO05D006136 6.3e-78 295.4 234 70.9
TWI32G1096 Tripterygium wilfordii HOM05D005180 ORTHO05D006136 8.2e-78 295.0 198 77.3
Dinv16767 Davidia involucrata HOM05D005180 ORTHO05D006136 3.1e-77 293.1 210 81.4
PSO063G1868 Papaver somniferum HOM05D005180 ORTHO05D006136 3.1e-77 293.1 237 65.4
Aqoxy3G02241 Aquilegia oxysepala HOM05D005180 ORTHO05D006136 5.3e-77 292.4 232 73.3
TWI60G1377 Tripterygium wilfordii HOM05D005180 ORTHO05D006136 7.0e-77 292.0 197 77.2
HPP92_017562 Vanilla planifolia HOM05D005180 ORTHO05D006136 7.0e-77 292.0 229 72.9
Lsat_1_v5_gn_1_93761 Lactuca sativa HOM05D005180 ORTHO05D006136 1.6e-76 290.8 201 74.6
AUR62005241 Chenopodium quinoa HOM05D005180 ORTHO05D006136 2.0e-76 290.4 234 66.7
Potri.013G082900 Populus trichocarpa HOM05D005180 ORTHO05D006136 2.0e-76 290.4 188 80.3
THA.LOC104820896 Tarenaya hassleriana HOM05D005180 ORTHO05D006136 2.0e-76 290.4 197 77.2
Lj2P827T12 Lonicera japonica HOM05D005180 ORTHO05D006136 4.5e-76 289.3 190 78.9
PSO782G2417 Papaver somniferum HOM05D005180 ORTHO05D006136 5.9e-76 288.9 233 72.5
CARHR196370 Cardamine hirsuta HOM05D005180 ORTHO05D006136 1.0e-75 288.1 232 67.2
AUR62000723 Chenopodium quinoa HOM05D005180 ORTHO05D006136 1.7e-75 287.3 234 67.5
MBI19_g22663_MAGBIO Magnolia biondii HOM05D005180 ORTHO05D006136 1.7e-75 287.3 230 73.5
Os08g0160000 Oryza sativa ssp. japonica HOM05D005180 ORTHO05D006136 1.7e-75 287.3 243 69.5
Ah.04g161260 Amaranthus hybridus HOM05D005180 ORTHO05D006136 6.5e-75 285.4 233 66.5
AL6G27810 Arabidopsis lyrata HOM05D005180 ORTHO05D006136 1.5e-74 284.3 213 71.8
AT5G16790 Arabidopsis thaliana HOM05D005180 ORTHO05D006136 1.9e-74 283.9 213 71.8
Zm00001eb403820 Zea mays HOM05D005180 ORTHO05D006136 3.2e-74 283.1 243 69.5
Aa31LG5G13450 Aethionema arabicum HOM05D005180 ORTHO05D006136 4.2e-74 282.7 235 71.5
CDE02G3757 Ceratophyllum demersum HOM05D005180 ORTHO05D006136 9.4e-74 281.6 230 68.3
Hund05844 Selenicereus undatus HOM05D005180 ORTHO05D006136 2.3e-72 276.9 199 73.9
AL3G12410 Arabidopsis lyrata HOM05D005180 ORTHO05D006136 4.4e-71 272.7 235 63.0
ATR0829G067 Amborella trichopoda HOM05D005180 ORTHO05D006136 9.7e-71 271.6 234 69.7
A05p44170 Brassica napus HOM05D005180 ORTHO05D006136 9.7e-71 271.6 201 69.7
BraSC90t46693Z Brassica rapa HOM05D005180 ORTHO05D006136 9.7e-71 271.6 201 69.7
AT3G02950 Arabidopsis thaliana HOM05D005180 ORTHO05D006136 2.2e-70 270.4 201 70.1
C05p63850 Brassica napus HOM05D005180 ORTHO05D006136 2.2e-70 270.4 201 69.7
BolC5t35050H Brassica oleracea HOM05D005180 ORTHO05D006136 2.2e-70 270.4 201 69.7
Thhalv10021437m.g Eutrema salsugineum HOM05D005180 ORTHO05D006136 2.2e-70 270.4 192 72.4
Carub.0003s0208 Capsella rubella HOM05D005180 ORTHO05D006136 2.8e-70 270.0 201 71.1
CARHR076980 Cardamine hirsuta HOM05D005180 ORTHO05D006136 2.4e-69 266.9 201 69.2
Sp3g02010 Schrenkiella parvula HOM05D005180 ORTHO05D006136 5.3e-69 265.8 201 70.1
Os05g0569800 Oryza sativa ssp. japonica HOM05D005180 ORTHO05D006136 1.2e-68 264.6 244 64.3
Zm00001eb001480 Zea mays HOM05D005180 ORTHO05D006136 1.6e-68 264.2 243 65.0
Cpa.g.sc14.58 Carica papaya HOM05D005180 ORTHO05D006136 3.8e-67 259.6 175 74.9
AagrBONN_evm.TU.Sc2ySwM_344.1992 Anthoceros agrestis HOM05D005180 ORTHO05D006136 7.2e-66 255.4 194 69.6
Mapoly0076s0002 Marchantia polymorpha HOM05D005180 ORTHO05D006136 3.6e-65 253.1 194 67.0
CDE11G0176 Ceratophyllum demersum HOM05D005180 ORTHO05D006136 1.4e-64 251.1 179 71.5
SMO356G0075 Selaginella moellendorffii HOM05D005180 ORTHO05D006136 1.8e-64 250.8 199 64.3
Pp3c15_21620 Physcomitrium patens HOM05D005180 ORTHO05D006136 3.8e-59 233.0 194 62.4
Carub.0006s1501 Capsella rubella HOM05D005180 ORTHO05D006136 9.8e-55 218.4 169 68.6
SHI53994 Sapria himalayana HOM05D005180 ORTHO05D006136 3.7e-54 216.5 234 54.7
SEGI_37847 Sequoiadendron giganteum HOM05D005180 ORTHO05D006136 2.0e-52 210.7 192 58.9
Prupe.8G026900 Prunus persica HOM05D005180 ORTHO05D006136 4.5e-52 209.5 198 60.6
MD05G1022700 Malus domestica HOM05D005180 ORTHO05D006136 2.8e-49 200.3 169 65.7
MD00G1125800 Malus domestica HOM05D005180 ORTHO05D006136 1.2e-41 174.9 134 68.7
Prupe.8G027200 Prunus persica HOM05D005180 ORTHO05D006136 2.0e-39 167.5 103 79.6
MD05G1023000 Malus domestica HOM05D005180 ORTHO05D006136 1.6e-36 157.9 242 45.5
CBR_g51237 Chara braunii HOM05D005180 ORTHO05D006136 1.3e-35 154.8 177 48.6
Glyma.07G081200 Glycine max HOM05D005180 ORTHO05D006136 1.7e-35 154.5 95 78.9
CBR_g4125 Chara braunii HOM05D005180 ORTHO05D006136 2.1e-33 147.5 174 47.1
arahy.Tifrunner.gnm1.ann1.IVXM4E Arachis hypogaea HOM05D002901 ORTHO05D003183 1.8e-32 144.4 89 89.9
arahy.Tifrunner.gnm1.ann1.G5NZ7A Arachis hypogaea HOM05D003075 ORTHO05D003430 2.4e-29 134.0 113 71.7
MCO09G003 Micromonas commoda HOM05D005180 ORTHO05D006136 2.1e-28 131.0 182 40.7
SHI47254 Sapria himalayana HOM05D005180 ORTHO05D006136 7.8e-28 129.0 129 57.4
Prupe.8G026600 Prunus persica HOM05D005180 ORTHO05D006136 6.8e-24 115.9 87 64.4
Solyc11g072180.3 Solanum lycopersicum HOM05D005180 ORTHO05D006136 2.1e-17 94.4 89 68.5
arahy.Tifrunner.gnm1.ann1.E9FA5X Arachis hypogaea HOM05D006423 ORTHO05D001299 2.8e-17 94.0 66 81.8
Cre03.g182350 Chlamydomonas reinhardtii HOM05D005180 ORTHO05D006136 3.6e-17 93.6 185 33.0
arahy.Tifrunner.gnm1.ann1.DE57MX Arachis hypogaea HOM05D004241 ORTHO05D001299 8.1e-17 92.4 51 94.1
arahy.Tifrunner.gnm1.ann1.Y37JRT Arachis hypogaea HOM05D002544 ORTHO05D007277 8.1e-17 92.4 51 94.1
arahy.Tifrunner.gnm1.ann1.12W07B Arachis hypogaea HOM05D004241 ORTHO05D001299 6.9e-16 89.4 51 92.2
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 8.9e-16 89.0 106 61.3
FvH4_4g00100 Fragaria vesca HOM05D005180 ORTHO05D006136 2.0e-15 87.8 88 56.8
arahy.Tifrunner.gnm1.ann1.DBFW6U Arachis hypogaea HOM05D001801 ORTHO05D001739 3.4e-15 87.0 51 90.2
arahy.Tifrunner.gnm1.ann1.Z65828 Arachis hypogaea HOM05D006423 ORTHO05D001299 3.4e-15 87.0 51 90.2
arahy.Tifrunner.gnm1.ann1.G8Z8HQ Arachis hypogaea HOM05D006423 ORTHO05D008233 7.6e-15 85.9 53 86.8
arahy.Tifrunner.gnm1.ann1.0EZ80L Arachis hypogaea HOM05D006763 ORTHO05D008659 1.3e-14 85.1 51 88.2
arahy.Tifrunner.gnm1.ann1.V3V8ZQ Arachis hypogaea HOM05D006423 ORTHO05D001299 1.3e-14 85.1 76 69.7
arahy.Tifrunner.gnm1.ann1.6MTV2V Arachis hypogaea HOM05D004552 ORTHO05D005501 1.7e-14 84.7 51 88.2
arahy.Tifrunner.gnm1.ann1.EC53M8 Arachis hypogaea HOM05D006423 ORTHO05D001299 2.2e-14 84.3 51 88.2
arahy.Tifrunner.gnm1.ann1.7BQD9K Arachis hypogaea HOM05D006423 ORTHO05D001299 3.8e-14 83.6 51 86.3
SHI47253 Sapria himalayana HOM05D005180 ORTHO05D006136 2.4e-13 80.9 44 86.4
arahy.Tifrunner.gnm1.ann1.8Z2PYB Arachis hypogaea HOM05D001198 ORTHO05D001599 4.2e-13 80.1 51 84.3
PRCOL_00001653 Prasinoderma coloniale HOM05D005180 ORTHO05D006136 2.7e-12 77.4 180 31.1
arahy.Tifrunner.gnm1.ann1.B6QDWV Arachis hypogaea HOM05D000476 ORTHO05D002733 1.7e-11 74.7 42 81.0
arahy.Tifrunner.gnm1.ann1.Y4C5P2 Arachis hypogaea HOM05D000476 ORTHO05D002733 1.1e-10 72.0 43 76.7
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 1.5e-10 71.6 75 65.3
arahy.Tifrunner.gnm1.ann1.Y1Z0G8 Arachis hypogaea HOM05D008645 ORTHO05D084398 1.5e-10 71.6 94 54.3
arahy.Tifrunner.gnm1.ann1.05WSPX Arachis hypogaea HOM05D002472 ORTHO05D002827 2.5e-10 70.9 45 71.1
arahy.Tifrunner.gnm1.ann1.YV18TB Arachis hypogaea HOM05D008645 ORTHO05D007788 3.1e-08 63.9 109 45.9
arahy.Tifrunner.gnm1.ann1.6GXK25 Arachis hypogaea HOM05D008645 ORTHO05D086077 1.5e-07 61.6 112 42.9
arahy.Tifrunner.gnm1.ann1.3RE0GA Arachis hypogaea HOM05D000499 ORTHO05D006811 4.5e-07 60.1 77 57.1
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 7.6e-07 59.3 60 70.0
FAN23G1155 Fragaria x ananassa HOM05D001255 ORTHO05D011996 1.3e-06 58.5 81 45.7
arahy.Tifrunner.gnm1.ann1.KSY044 Arachis hypogaea HOM05D000218 ORTHO05D000125 1.7e-06 58.2 64 64.1


User provided reference genes

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