Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RVT61B Arachis hypogaea HOM05D000216 ORTHO05D000634 5.3e-72 274.2 137 100.0
arahy.Tifrunner.gnm1.ann1.8W122S Arachis hypogaea HOM05D000216 ORTHO05D000634 3.2e-37 158.7 183 56.3
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 4.7e-28 128.3 164 51.8
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 4.1e-16 88.6 242 31.0
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 9.1e-16 87.4 180 38.9
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 2.9e-14 82.4 231 32.9
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.9e-13 79.7 65 63.1
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 3.2e-13 79.0 77 55.8
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 7.2e-13 77.8 65 63.1
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.2e-12 77.0 241 30.3
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.7e-12 75.9 70 58.6
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 3.6e-12 75.5 65 61.5
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.0e-11 73.9 65 64.6
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.0e-11 72.4 61 65.6
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.0e-11 72.4 230 30.4
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.0e-11 72.4 230 30.4
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.0e-11 72.4 230 30.4
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.0e-11 72.4 230 30.4
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.0e-11 72.4 230 30.4
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.2e-11 71.6 152 35.5
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 6.8e-11 71.2 246 28.5
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 8.8e-11 70.9 243 28.4
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 5.7e-10 68.2 62 61.3
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 7.5e-10 67.8 198 33.3
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.2e-09 66.2 234 29.5
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.8e-09 65.9 62 59.7
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 4.8e-09 65.1 65 58.5
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.8e-08 63.2 223 30.9
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.4e-08 62.8 237 28.7
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 4.1e-08 62.0 60 58.3
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.0e-08 61.2 209 29.2
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 60.5 62 58.1
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 60.5 62 58.1
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 60.5 223 30.9
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 60.5 223 30.9
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.2e-07 60.5 223 30.9
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.6e-07 60.1 70 51.4
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.7e-07 59.3 230 26.5
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-07 58.9 231 26.4
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-07 58.9 231 26.4
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-07 58.9 231 26.4
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-07 58.9 231 26.4
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-07 58.9 231 26.4
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-07 58.9 231 26.4
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-07 58.9 231 26.4
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 7.7e-07 57.8 56 57.1
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.7e-07 57.8 80 47.5
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-06 57.4 70 45.7
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-06 57.4 70 45.7
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-06 57.4 70 45.7
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-06 57.4 70 45.7
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-06 57.4 70 45.7
Lalb_Chr23g0274581 Lupinus albus HOM05D000216 ORTHO05D000634 1.7e-06 56.6 58 50.0
Phvul.003G256666 Phaseolus vulgaris HOM05D000216 ORTHO05D000634 2.3e-06 56.2 36 75.0
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 6.6e-06 54.7 66 45.5
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 6.6e-06 54.7 85 44.7


User provided reference genes

Program Settings