Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.KEPZ3C Arachis hypogaea HOM05D004611 ORTHO05D005794 1.2e-71 273.1 142 100.0
arahy.Tifrunner.gnm1.ann1.G1FZ3Z Arachis hypogaea HOM05D004611 ORTHO05D005794 1.4e-64 249.6 145 92.4
arahy.Tifrunner.gnm1.ann1.MSK2EL Arachis hypogaea HOM05D004611 ORTHO05D005794 2.9e-49 198.7 111 94.6
arahy.Tifrunner.gnm1.ann1.J0E0JD Arachis hypogaea HOM05D004611 ORTHO05D005794 3.2e-48 195.3 109 94.5
arahy.Tifrunner.gnm1.ann1.VX19JK Arachis hypogaea HOM05D004611 ORTHO05D005794 3.2e-48 195.3 109 94.5
arahy.Tifrunner.gnm1.ann1.631YT7 Arachis hypogaea HOM05D004611 ORTHO05D005794 2.1e-47 192.6 108 94.4
arahy.Tifrunner.gnm1.ann1.N4MQ0H Arachis hypogaea HOM05D004611 ORTHO05D005794 2.7e-47 192.2 111 91.9
Phvul.006G121000 Phaseolus vulgaris HOM05D004611 ORTHO05D005794 1.0e-46 190.3 109 89.9
Psat1g162720 Pisum sativum HOM05D004611 ORTHO05D005794 1.0e-46 190.3 109 89.9
Glyma.15G136900 Glycine max HOM05D004611 ORTHO05D005794 1.4e-46 189.9 109 90.8
Lalb_Chr18g0058501 Lupinus albus HOM05D004611 ORTHO05D005794 1.4e-46 189.9 109 89.9
TPR.G10113 Trifolium pratense HOM05D004611 ORTHO05D005794 1.4e-46 189.9 109 89.0
VMungo0540G0237 Vigna mungo HOM05D004611 ORTHO05D005794 1.8e-46 189.5 109 89.9
arahy.Tifrunner.gnm1.ann1.80REVR Arachis hypogaea HOM05D004611 ORTHO05D005794 3.0e-46 188.7 111 91.0
Glyma.09G031900 Glycine max HOM05D004611 ORTHO05D005794 3.0e-46 188.7 109 89.9
Ca_00946_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 3.9e-46 188.3 109 88.1
Ca_00952_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 3.9e-46 188.3 109 88.1
Lj6g0013514 Lotus japonicus HOM05D004611 ORTHO05D005794 8.8e-46 187.2 109 88.1
Thecc.04G307400 Theobroma cacao HOM05D004611 ORTHO05D005794 4.4e-45 184.9 109 88.1
Duzib151G0109 Durio zibethinus HOM05D004611 ORTHO05D005794 5.7e-45 184.5 109 87.2
Gohir.D02G061400 Gossypium hirsutum HOM05D004611 ORTHO05D005794 7.4e-45 184.1 109 87.2
Oeu045272.1 Olea europaea HOM05D004611 ORTHO05D005794 7.4e-45 184.1 109 88.1
Gohir.A02G056200 Gossypium hirsutum HOM05D004611 ORTHO05D005794 9.7e-45 183.7 109 87.2
Gorai.005G069100 Gossypium raimondii HOM05D004611 ORTHO05D005794 9.7e-45 183.7 109 87.2
Manes.03G208700 Manihot esculenta HOM05D004611 ORTHO05D005794 9.7e-45 183.7 109 87.2
MSTRG.21753 Avicennia marina HOM05D004611 ORTHO05D005794 1.3e-44 183.3 109 88.1
Ah.07g203900 Amaranthus hybridus HOM05D004611 ORTHO05D005794 1.7e-44 183.0 109 88.1
CAN.G179.3 Capsicum annuum HOM05D004611 ORTHO05D005794 1.7e-44 183.0 109 87.2
CSS0006805 Camellia sinensis var. sinensis HOM05D004611 ORTHO05D005794 2.2e-44 182.6 109 88.1
Lj6A696G31 Lonicera japonica HOM05D004611 ORTHO05D005794 2.2e-44 182.6 109 87.2
Peaxi162Scf00126g01513 Petunia axillaris HOM05D004611 ORTHO05D005794 2.8e-44 182.2 109 87.2
Rhsim02G0001700 Rhododendron simsii HOM05D004611 ORTHO05D005794 2.8e-44 182.2 109 87.2
Cc03_g00470 Coffea canephora HOM05D004611 ORTHO05D005794 3.7e-44 181.8 109 86.2
Actinidia02513 Actinidia chinensis HOM05D004611 ORTHO05D005794 4.8e-44 181.4 109 86.2
Actinidia14243 Actinidia chinensis HOM05D004611 ORTHO05D005794 4.8e-44 181.4 109 86.2
QL06p013322 Quercus lobata HOM05D004611 ORTHO05D005794 4.8e-44 181.4 109 86.2
CsaV3_6G000020 Cucumis sativus L. HOM05D004611 ORTHO05D005794 6.3e-44 181.0 109 87.2
Dinv15127 Davidia involucrata HOM05D004611 ORTHO05D005794 6.3e-44 181.0 109 86.2
Nitab4.5_0000062g0520 Nicotiana tabacum HOM05D004611 ORTHO05D005794 6.3e-44 181.0 109 86.2
Solyc01g057850.4 Solanum lycopersicum HOM05D004611 ORTHO05D005794 6.3e-44 181.0 109 86.2
Sopen01g023180 Solanum pennellii HOM05D004611 ORTHO05D005794 6.3e-44 181.0 109 86.2
PGSC0003DMG401001235 Solanum tuberosum HOM05D004611 ORTHO05D005794 6.3e-44 181.0 109 86.2
Atru.chr4.3104 Acer truncatum HOM05D004611 ORTHO05D005794 8.2e-44 180.6 109 85.3
EL10Ac3g06291 Beta vulgaris HOM05D004611 ORTHO05D005794 8.2e-44 180.6 109 85.3
TWI73G0848 Tripterygium wilfordii HOM05D004611 ORTHO05D005794 8.2e-44 180.6 109 85.3
Aqoxy2G02628 Aquilegia oxysepala HOM05D004611 ORTHO05D005794 1.1e-43 180.3 109 85.3
Lsat_1_v5_gn_1_40220 Lactuca sativa HOM05D004611 ORTHO05D005794 1.4e-43 179.9 109 85.3
Potri.008G101200 Populus trichocarpa HOM05D004611 ORTHO05D005794 1.4e-43 179.9 109 85.3
THA.LOC104818864 Tarenaya hassleriana HOM05D004611 ORTHO05D005794 1.4e-43 179.9 109 83.5
vmacro15164 Vaccinium macrocarpon HOM05D004611 ORTHO05D005794 1.4e-43 179.9 109 85.3
arahy.Tifrunner.gnm1.ann1.PAF7VJ Arachis hypogaea HOM05D004611 ORTHO05D005794 2.4e-43 179.1 109 89.9
Cpa.g.sc146.72 Carica papaya HOM05D004611 ORTHO05D005794 2.4e-43 179.1 109 83.5
COL.COLO4_34558 Corchorus olitorius HOM05D004611 ORTHO05D005794 2.4e-43 179.1 109 83.5
Cfa015689 Carpinus fangiana HOM05D004611 ORTHO05D005794 3.1e-43 178.7 109 85.3
Haze_00831 Corylus avellana HOM05D004611 ORTHO05D005794 3.1e-43 178.7 109 85.3
MELO3C021251.2 Cucumis melo HOM05D004611 ORTHO05D005794 3.1e-43 178.7 109 86.2
MBI19_g32689_MAGBIO Magnolia biondii HOM05D004611 ORTHO05D005794 3.1e-43 178.7 109 84.4
TAR362G1323 Trochodendron aralioides HOM05D004611 ORTHO05D005794 3.1e-43 178.7 109 85.3
Migut.N00024 Erythranthe guttata HOM05D004611 ORTHO05D005794 4.1e-43 178.3 109 85.3
Eucgr.H04083 Eucalyptus grandis HOM05D004611 ORTHO05D005794 4.1e-43 178.3 109 85.3
Sc25g0001590 Simmondsia chinensis HOM05D004611 ORTHO05D005794 4.1e-43 178.3 109 86.2
HPP92_010927 Vanilla planifolia HOM05D004611 ORTHO05D005794 4.1e-43 178.3 109 84.4
CiPaw.02G072100 Carya illinoinensis HOM05D004611 ORTHO05D005794 5.3e-43 177.9 109 85.3
ClCG06G004360 Citrullus lanatus HOM05D004611 ORTHO05D005794 5.3e-43 177.9 109 85.3
HanXRQChr11g0353941 Helianthus annuus HOM05D004611 ORTHO05D005794 6.9e-43 177.6 109 82.6
Sabra08G0076500 Salix brachista HOM05D004611 ORTHO05D005794 6.9e-43 177.6 109 85.3
Sed0020756 Sechium edule HOM05D004611 ORTHO05D005794 6.9e-43 177.6 109 84.4
CDE02G0179 Ceratophyllum demersum HOM05D004611 ORTHO05D005794 9.1e-43 177.2 109 84.4
DCAR_030442 Daucus carota HOM05D004611 ORTHO05D005794 1.2e-42 176.8 109 83.5
PSO541G3737 Papaver somniferum HOM05D004611 ORTHO05D005794 1.2e-42 176.8 109 83.5
PSO675G3276 Papaver somniferum HOM05D004611 ORTHO05D005794 1.2e-42 176.8 109 83.5
GSVIVG01034941001 Vitis vinifera HOM05D004611 ORTHO05D005794 1.2e-42 176.8 109 83.5
PGR004G0015 Punica granatum HOM05D004611 ORTHO05D005794 1.5e-42 176.4 109 82.6
Aa31LG3G6800 Aethionema arabicum HOM05D004611 ORTHO05D005794 2.0e-42 176.0 109 81.7
Os12g0564600 Oryza sativa ssp. japonica HOM05D004611 ORTHO05D005794 2.0e-42 176.0 109 83.5
ATR0693G069 Amborella trichopoda HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
AL8G23880 Arabidopsis lyrata HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
AT5G49930 Arabidopsis thaliana HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
BcaB01g02933 Brassica carinata HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
BcaC01g04844 Brassica carinata HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
A03p27560 Brassica napus HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
C03p33270 Brassica napus HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
BolC3t15649H Brassica oleracea HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
BraA03t11969Z Brassica rapa HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
CARHR258790 Cardamine hirsuta HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
Thhalv10012510m.g Eutrema salsugineum HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
Sp6g11490 Schrenkiella parvula HOM05D004611 ORTHO05D005794 2.6e-42 175.6 109 80.7
ECA247G1486 Erigeron canadensis HOM05D004611 ORTHO05D005794 3.4e-42 175.3 109 83.5
Nn8g40813 Nelumbo nucifera HOM05D004611 ORTHO05D005794 4.5e-42 174.9 109 83.5
Carub.0008s0980 Capsella rubella HOM05D004611 ORTHO05D005794 5.9e-42 174.5 109 80.7
AUR62002591 Chenopodium quinoa HOM05D004611 ORTHO05D005794 7.7e-42 174.1 109 81.7
Zm00001eb136770 Zea mays HOM05D004611 ORTHO05D005794 7.7e-42 174.1 109 81.7
CANSAT78G0742 Cannabis sativa HOM05D004611 ORTHO05D005794 1.3e-41 173.3 109 82.6
AUR62030016 Chenopodium quinoa HOM05D004611 ORTHO05D005794 1.7e-41 172.9 109 81.7
MD13G1148000 Malus domestica HOM05D004611 ORTHO05D005794 2.2e-41 172.6 109 80.7
MD16G1147800 Malus domestica HOM05D004611 ORTHO05D005794 2.2e-41 172.6 109 80.7
Prupe.1G111500 Prunus persica HOM05D004611 ORTHO05D005794 2.2e-41 172.6 109 80.7
DCAR_002526 Daucus carota HOM05D004611 ORTHO05D005794 1.1e-40 170.2 109 79.8
RcHm_v2.0_Chr4g0426211 Rosa chinensis HOM05D004611 ORTHO05D005794 1.9e-40 169.5 109 79.8
FvH4_4g20770 Fragaria vesca HOM05D004611 ORTHO05D005794 3.2e-40 168.7 109 78.9
FAN12G0652 Fragaria x ananassa HOM05D004611 ORTHO05D005794 3.2e-40 168.7 109 78.9
Ciclev10004185m.g Citrus clementina HOM05D004611 ORTHO05D005794 2.1e-39 166.0 139 68.3
FAN07G0444 Fragaria x ananassa HOM05D004611 ORTHO05D005794 4.7e-39 164.9 109 77.1
SEGI_18823 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 3.9e-38 161.8 109 75.2
SGA_v2.0_scaffold123G33405 Striga asiatica HOM05D004611 ORTHO05D005794 4.4e-37 158.3 109 79.8
GSVIVG01017617001 Vitis vinifera HOM05D004611 ORTHO05D005794 4.4e-37 158.3 143 65.7
AagrBONN_evm.TU.Sc2ySwM_344.977 Anthoceros agrestis HOM05D004611 ORTHO05D005794 1.7e-36 156.4 109 70.6
Pp3c6_29680 Physcomitrium patens HOM05D004611 ORTHO05D005794 1.6e-34 149.8 109 71.6
Mapoly0029s0152 Marchantia polymorpha HOM05D004611 ORTHO05D005794 2.0e-34 149.4 109 69.7
CBR_g49302 Chara braunii HOM05D004611 ORTHO05D005794 5.0e-33 144.8 120 64.2
SMO356G0321 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 4.2e-32 141.7 109 67.0
arahy.Tifrunner.gnm1.ann1.LTB099 Arachis hypogaea HOM05D004611 ORTHO05D005794 1.2e-31 140.2 133 64.7
Actinidia25067 Actinidia chinensis HOM05D004611 ORTHO05D005794 1.8e-27 126.3 78 84.6
PRCOL_00000926 Prasinoderma coloniale HOM05D004611 ORTHO05D005794 3.1e-27 125.6 108 61.1
Actinidia07517 Actinidia chinensis HOM05D004611 ORTHO05D005794 5.3e-27 124.8 72 88.9
arahy.Tifrunner.gnm1.ann1.F9ANIH Arachis hypogaea HOM05D004611 ORTHO05D005794 1.2e-21 107.1 72 81.9
arahy.Tifrunner.gnm1.ann1.0CQZ6Z Arachis hypogaea HOM05D000862 ORTHO05D000003 1.1e-19 100.5 71 77.5
MCO13G239 Micromonas commoda HOM05D004611 ORTHO05D005794 1.8e-19 99.8 110 47.3
arahy.Tifrunner.gnm1.ann1.R4H24K Arachis hypogaea HOM05D000862 ORTHO05D000003 3.1e-19 99.0 71 76.1
unitig_746.g26903 Utricularia gibba HOM05D004611 ORTHO05D005794 2.3e-17 92.8 105 55.2
COL.COLO4_13521 Corchorus olitorius HOM05D004611 ORTHO05D005794 1.3e-09 67.0 56 64.3
Cfa025106 Carpinus fangiana HOM05D004611 ORTHO05D005794 7.3e-08 61.2 91 40.7
Cre17.g734961 Chlamydomonas reinhardtii HOM05D004611 ORTHO05D005794 8.9e-06 54.3 105 39.0


User provided reference genes

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