Gene: arahy.Tifrunner.gnm1.ann1.R4H24K

General Information

Structural Information

Species Arachis hypogaea
Gene Identifier arahy.Tifrunner.gnm1.ann1.R4H24K
Transcript Identifier arahy.Tifrunner.gnm1.ann1.R4H24K.1
Gene Type Coding gene
Location arahy.Tifrunner.gnm1.Arahy.17 : 27961883-27972081 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000862
#Genes/#Species 693/92
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id arahy.Tifrunner.gnm1.ann1.R4H24K.v1.0
pacid 42648473

Descriptions

Short descriptions
Ortholog descriptions

Description PF01419//PF01535//PF13041//PF14432 - Jacalin-like lectin domain (Jacalin) // PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0051607	ISO	PLAZA Integrative Orthology	defense response to virus	AT1G05760
GO:0046741	ISO	PLAZA Integrative Orthology	transport of virus in host, tissue to tissue	AT1G05760
GO:0009615	ISO	PLAZA Integrative Orthology	response to virus	AT1G05760

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030246	IEA	InterPro	carbohydrate binding
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G19720
GO:0043621	ISO	PLAZA Integrative Orthology	protein self-association	AT1G05760

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G19720
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G19720
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G19720

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036404	Jacalin-like lectin domain superfamily
IPR001229	Jacalin-like lectin domain
IPR002885	Pentatricopeptide repeat
IPR033734	Jacalin-like lectin domain, plant
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR032867	DYW domain

Mapman id	Description
16.11.3.3.4.32	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (DYW7)