Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 1.0e-67 260.0 133 100.0
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 6.9e-61 237.3 123 99.2
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 3.8e-59 231.5 123 96.7
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 3.8e-59 231.5 123 96.7
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 1.8e-53 212.6 123 87.0
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 4.1e-53 211.5 123 87.0
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 2.0e-52 209.1 123 86.2
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 5.9e-52 207.6 123 85.4
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 1.3e-51 206.5 123 85.4
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 1.1e-50 203.4 123 85.4
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 4.2e-50 201.4 120 85.0
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 8.8e-48 193.7 123 80.5
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 7.7e-44 180.6 121 76.0
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 1.7e-43 179.5 121 72.7
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 6.5e-43 177.6 123 72.4
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 8.5e-43 177.2 123 74.0
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 1.4e-42 176.4 123 70.7
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 1.4e-42 176.4 123 70.7
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 1.4e-42 176.4 123 73.2
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 4.2e-42 174.9 123 71.5
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 7.2e-42 174.1 123 69.9
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 1.2e-41 173.3 123 69.9
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 1.6e-41 172.9 121 71.1
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 1.6e-41 172.9 121 71.1
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 2.1e-41 172.6 119 72.3
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 2.1e-41 172.6 119 72.3
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 3.6e-41 171.8 121 71.1
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 3.6e-41 171.8 122 70.5
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.7e-41 171.4 121 71.1
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 6.1e-41 171.0 123 69.9
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 1.4e-40 169.9 123 71.5
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 1.4e-40 169.9 121 66.9
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 1.4e-40 169.9 121 66.9
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 1.8e-40 169.5 119 68.9
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 2.3e-40 169.1 119 69.7
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 3.0e-40 168.7 123 68.3
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 3.0e-40 168.7 123 68.3
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 3.0e-40 168.7 119 68.1
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 6.7e-40 167.5 109 81.7
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 8.8e-40 167.2 121 66.9
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 1.1e-39 166.8 123 69.9
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 3.3e-39 165.2 139 62.6
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 3.3e-39 165.2 123 65.0
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 4.4e-39 164.9 123 66.7
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 4.4e-39 164.9 140 62.1
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 4.4e-39 164.9 121 68.6
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 1.3e-38 163.3 123 68.3
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 1.3e-38 163.3 123 67.5
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 1.3e-38 163.3 121 66.9
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 1.7e-38 162.9 123 65.0
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 1.7e-38 162.9 123 65.0
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 2.8e-38 162.2 123 64.2
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 3.7e-38 161.8 123 67.5
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 4.8e-38 161.4 119 65.5
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 4.8e-38 161.4 117 68.4
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 8.2e-38 160.6 121 64.5
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 1.1e-37 160.2 123 64.2
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 1.4e-37 159.8 121 67.8
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 1.8e-37 159.5 130 63.8
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.8e-37 159.5 125 66.4
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 1.8e-37 159.5 121 68.6
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 3.1e-37 158.7 123 64.2
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 3.1e-37 158.7 121 66.1
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 4.1e-37 158.3 119 66.4
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 9.1e-37 157.1 123 63.4
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 1.2e-36 156.8 123 62.6
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 1.6e-36 156.4 119 63.9
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 2.0e-36 156.0 123 61.0
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 4.5e-36 154.8 117 64.1
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 5.9e-36 154.5 122 63.9
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 5.9e-36 154.5 137 59.9
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.0e-35 153.7 138 60.9
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 1.7e-35 152.9 121 63.6
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 1.7e-35 152.9 123 62.6
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 1.7e-35 152.9 123 65.9
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 2.2e-35 152.5 116 68.1
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 2.2e-35 152.5 117 63.2
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 3.8e-35 151.8 123 60.2
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 6.5e-35 151.0 117 64.1
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 6.5e-35 151.0 106 71.7
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 8.5e-35 150.6 116 65.5
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 1.1e-34 150.2 116 66.4
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 1.5e-34 149.8 108 73.1
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 1.5e-34 149.8 121 62.0
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 2.5e-34 149.1 121 62.0
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 7.2e-34 147.5 160 52.5
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.2e-33 146.7 119 63.0
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.2e-33 146.7 119 63.0
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 1.2e-33 146.7 123 61.0
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 3.6e-33 145.2 198 48.5
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 8.0e-33 144.1 159 52.2
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 2.3e-32 142.5 104 68.3
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 3.0e-32 142.1 117 61.5
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 4.0e-32 141.7 109 67.0
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 1.5e-31 139.8 116 56.9
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 1.5e-31 139.8 173 46.8
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 5.7e-31 137.9 116 56.9
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 1.4e-29 133.3 78 83.3
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 9.1e-29 130.6 101 61.4
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 3.5e-28 128.6 107 64.5
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 2.9e-27 125.6 77 80.5
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 3.2e-26 122.1 108 56.5
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 3.2e-26 122.1 108 56.5
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 3.2e-26 122.1 108 56.5
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 4.7e-25 118.2 123 55.3
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 2.0e-23 112.8 99 57.6
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 1.3e-22 110.2 123 51.2
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 4.5e-20 101.7 74 60.8
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 9.5e-18 94.0 74 62.2
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 1.8e-16 89.7 45 97.8
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 8.3e-14 80.9 109 46.8
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.8e-13 79.7 105 47.6
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 2.7e-12 75.9 110 36.4
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 2.9e-11 72.4 50 68.0
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 1.8e-08 63.2 113 31.0
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 2.3e-08 62.8 31 93.5
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 9.8e-07 57.4 45 57.8
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 8.3e-06 54.3 43 60.5


User provided reference genes

Program Settings