Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EI37M4 Arachis hypogaea HOM05D002781 ORTHO05D084801 5.6e-46 187.2 91 100.0
Hund22584 Selenicereus undatus HOM05D002781 ORTHO05D003382 3.4e-11 71.6 129 35.7
arahy.Tifrunner.gnm1.ann1.FW1LZ6 Arachis hypogaea HOM05D002781 ORTHO05D003382 5.9e-11 70.9 125 40.0
arahy.Tifrunner.gnm1.ann1.VR4H6N Arachis hypogaea HOM05D002781 ORTHO05D003382 8.5e-10 67.0 132 37.1
Ah.13g073200 Amaranthus hybridus HOM05D002781 ORTHO05D003382 3.6e-08 61.6 129 31.8
AUR62002480 Chenopodium quinoa HOM05D002781 ORTHO05D003382 3.6e-08 61.6 129 30.2
Oeu014115.1 Olea europaea HOM05D002781 ORTHO05D003382 6.1e-08 60.8 129 34.1
SGA_v2.0_scaffold20G09307 Striga asiatica HOM05D002781 ORTHO05D003382 6.1e-08 60.8 129 34.1
MBI13_g33568_MAGBIO Magnolia biondii HOM05D002781 ORTHO05D003382 1.0e-07 60.1 129 34.1
unitig_747.g21377 Utricularia gibba HOM05D002781 ORTHO05D003382 1.0e-07 60.1 129 34.1
Haze_21649 Corylus avellana HOM05D002781 ORTHO05D003382 1.4e-07 59.7 129 33.3
Migut.E01411 Erythranthe guttata HOM05D002781 ORTHO05D003382 1.4e-07 59.7 129 34.9
VMungo0647G0806 Vigna mungo HOM05D002781 ORTHO05D003382 1.4e-07 59.7 129 34.1
MSTRG.13933 Avicennia marina HOM05D002781 ORTHO05D003382 1.8e-07 59.3 129 33.3
CANSAT78G1421 Cannabis sativa HOM05D002781 ORTHO05D003382 1.8e-07 59.3 129 33.3
Ca_25166_v3 Cicer arietinum L. HOM05D002781 ORTHO05D003382 1.8e-07 59.3 129 33.3
Glyma.14G101500 Glycine max HOM05D002781 ORTHO05D003382 1.8e-07 59.3 129 34.1
Peaxi162Scf00619g00214 Petunia axillaris HOM05D002781 ORTHO05D003382 1.8e-07 59.3 129 34.1
Psat6g026040 Pisum sativum HOM05D002781 ORTHO05D003382 1.8e-07 59.3 129 33.3
arahy.Tifrunner.gnm1.ann1.V530VD Arachis hypogaea HOM05D002781 ORTHO05D003382 2.3e-07 58.9 87 40.2
CAN.G786.5 Capsicum annuum HOM05D002781 ORTHO05D003382 2.3e-07 58.9 129 34.1
Cfa013226 Carpinus fangiana HOM05D002781 ORTHO05D003382 2.3e-07 58.9 129 33.3
Lalb_Chr04g0248401 Lupinus albus HOM05D002781 ORTHO05D003382 2.3e-07 58.9 126 34.9
Manes.02G204300 Manihot esculenta HOM05D002781 ORTHO05D003382 2.3e-07 58.9 128 32.0
TAR626G1626 Trochodendron aralioides HOM05D002781 ORTHO05D003382 2.3e-07 58.9 129 32.6
Actinidia03329 Actinidia chinensis HOM05D002781 ORTHO05D003382 3.0e-07 58.5 129 34.1
CAN.G1921.4 Capsicum annuum HOM05D002781 ORTHO05D003382 3.0e-07 58.5 129 33.3
Glyma.17G223600 Glycine max HOM05D002781 ORTHO05D003382 3.0e-07 58.5 129 33.3
Lalb_Chr10g0107001 Lupinus albus HOM05D002781 ORTHO05D003382 3.0e-07 58.5 126 34.1
Oeu019276.1 Olea europaea HOM05D002781 ORTHO05D003382 3.0e-07 58.5 129 32.6
Peaxi162Scf00858g00018 Petunia axillaris HOM05D002781 ORTHO05D003382 3.0e-07 58.5 104 38.5
Solyc05g056250.3 Solanum lycopersicum HOM05D002781 ORTHO05D003382 3.0e-07 58.5 129 33.3
Sopen05g034640 Solanum pennellii HOM05D002781 ORTHO05D003382 3.0e-07 58.5 129 33.3
CiPaw.07G216300 Carya illinoinensis HOM05D002781 ORTHO05D003382 3.9e-07 58.2 129 33.3
Nn4g24942 Nelumbo nucifera HOM05D002781 ORTHO05D003382 3.9e-07 58.2 129 33.3
THA.LOC104803886 Tarenaya hassleriana HOM05D002781 ORTHO05D003382 3.9e-07 58.2 129 32.6
Lsat_1_v5_gn_1_72341 Lactuca sativa HOM05D002781 ORTHO05D003382 5.1e-07 57.8 129 32.6
TPR.G30251 Trifolium pratense HOM05D002781 ORTHO05D003382 5.1e-07 57.8 125 32.8
TPR.G38912 Trifolium pratense HOM05D002781 ORTHO05D003382 5.1e-07 57.8 125 32.8
TAR383G0197 Trochodendron aralioides HOM05D002781 ORTHO05D003382 5.1e-07 57.8 129 32.6
GSVIVG01035583001 Vitis vinifera HOM05D002781 ORTHO05D003382 5.1e-07 57.8 129 32.6
Carub.0005s2052 Capsella rubella HOM05D002781 ORTHO05D003382 6.7e-07 57.4 129 32.6
COL.COLO4_19460 Corchorus olitorius HOM05D002781 ORTHO05D003382 6.7e-07 57.4 93 36.6
MELO3C003651.2 Cucumis melo HOM05D002781 ORTHO05D003382 6.7e-07 57.4 129 32.6
CsaV3_3G046850 Cucumis sativus L. HOM05D002781 ORTHO05D003382 6.7e-07 57.4 129 32.6
ECA248G0538 Erigeron canadensis HOM05D002781 ORTHO05D003382 6.7e-07 57.4 125 34.4
HanXRQChr11g0342691 Helianthus annuus HOM05D002781 ORTHO05D003382 6.7e-07 57.4 129 32.6
Lsat_1_v5_gn_5_33240 Lactuca sativa HOM05D002781 ORTHO05D003382 6.7e-07 57.4 125 32.8
Aqoxy7G02657 Aquilegia oxysepala HOM05D002781 ORTHO05D003382 8.8e-07 57.0 129 32.6
Eucgr.K02027 Eucalyptus grandis HOM05D002781 ORTHO05D003382 8.8e-07 57.0 129 34.1
Peaxi162Scf02754g00004 Petunia axillaris HOM05D002781 ORTHO05D003382 1.1e-06 56.6 99 35.4
Phvul.001G030000 Phaseolus vulgaris HOM05D002781 ORTHO05D003382 1.1e-06 56.6 125 32.0
PGR044G1761 Punica granatum HOM05D002781 ORTHO05D003382 1.1e-06 56.6 129 32.6
Rhsim07G0113300 Rhododendron simsii HOM05D002781 ORTHO05D003382 1.5e-06 56.2 129 31.8
SGA_v2.0_scaffold63G21766 Striga asiatica HOM05D002781 ORTHO05D003382 1.5e-06 56.2 129 32.6
Carub.0007s0935 Capsella rubella HOM05D002781 ORTHO05D003382 2.0e-06 55.8 129 31.8
Ca_13063_v3 Cicer arietinum L. HOM05D002781 ORTHO05D003382 2.0e-06 55.8 129 32.6
ClCG05G017340 Citrullus lanatus HOM05D002781 ORTHO05D003382 2.0e-06 55.8 129 32.6
Sabra06G0064900 Salix brachista HOM05D002781 ORTHO05D003382 2.0e-06 55.8 129 31.8
AagrBONN_evm.TU.Sc2ySwM_228.801 Anthoceros agrestis HOM05D002781 ORTHO05D003382 2.6e-06 55.5 129 31.8
BcaB01g00260 Brassica carinata HOM05D002781 ORTHO05D003382 2.6e-06 55.5 135 31.1
SalBow8G0076 Salvia bowleyana HOM05D002781 ORTHO05D003382 2.6e-06 55.5 125 32.8
CSS0008198 Camellia sinensis var. sinensis HOM05D002781 ORTHO05D003382 3.3e-06 55.1 125 33.6
CDE02G0432 Ceratophyllum demersum HOM05D002781 ORTHO05D003382 3.3e-06 55.1 129 31.8
EL10Ac3g06163 Beta vulgaris HOM05D002781 ORTHO05D003382 4.4e-06 54.7 129 29.5
FAN24G3093 Fragaria x ananassa HOM05D002781 ORTHO05D003382 4.4e-06 54.7 124 32.3
Prupe.8G055000 Prunus persica HOM05D002781 ORTHO05D003382 4.4e-06 54.7 129 31.0
SalBow1G4615 Salvia bowleyana HOM05D002781 ORTHO05D003382 4.4e-06 54.7 129 31.8
AT4G31180 Arabidopsis thaliana HOM05D002781 ORTHO05D003382 5.7e-06 54.3 125 32.8
Lj5g0001123 Lotus japonicus HOM05D002781 ORTHO05D003382 5.7e-06 54.3 129 30.2
Lj6A614T28 Lonicera japonica HOM05D002781 ORTHO05D003382 7.4e-06 53.9 129 32.6
Prupe.1G463800 Prunus persica HOM05D002781 ORTHO05D003382 7.4e-06 53.9 129 30.2
CSS0040336 Camellia sinensis var. sinensis HOM05D002781 ORTHO05D003382 9.7e-06 53.5 125 32.8
Gohir.D07G001600 Gossypium hirsutum HOM05D002781 ORTHO05D003382 9.7e-06 53.5 125 31.2
Gorai.001G001300 Gossypium raimondii HOM05D002781 ORTHO05D003382 9.7e-06 53.5 125 31.2


User provided reference genes

Program Settings