Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.E3N302 Arachis hypogaea HOM05D006724 ORTHO05D008514 6.6e-63 243.8 119 100.0
arahy.Tifrunner.gnm1.ann1.WDE0T2 Arachis hypogaea HOM05D006724 ORTHO05D008514 6.4e-50 200.7 154 68.8
arahy.Tifrunner.gnm1.ann1.N2BE0G Arachis hypogaea HOM05D006724 ORTHO05D008514 1.4e-49 199.5 156 67.9
arahy.Tifrunner.gnm1.ann1.60K44K Arachis hypogaea HOM05D006724 ORTHO05D008514 8.7e-47 190.3 166 63.3
Lalb_Chr01g0006641 Lupinus albus HOM05D006724 ORTHO05D008514 1.8e-44 182.6 154 61.7
Lj3g0025660 Lotus japonicus HOM05D006724 ORTHO05D008514 2.0e-43 179.1 156 59.6
CiPaw.11G166800 Carya illinoinensis HOM05D006724 ORTHO05D008514 1.3e-39 166.4 157 56.1
TPR.G28169 Trifolium pratense HOM05D006724 ORTHO05D008514 1.8e-39 166.0 154 56.5
Medtr8g061030 Medicago truncatula HOM05D006724 ORTHO05D008514 2.3e-39 165.6 156 55.8
Psat4g169400 Pisum sativum HOM05D006724 ORTHO05D008514 2.3e-39 165.6 154 55.2
Prupe.4G173900 Prunus persica HOM05D006724 ORTHO05D008514 2.3e-39 165.6 159 52.8
Cfa020617 Carpinus fangiana HOM05D006724 ORTHO05D008514 3.9e-39 164.9 157 56.7
Haze_09388 Corylus avellana HOM05D006724 ORTHO05D008514 1.5e-38 162.9 157 56.1
Glyma.06G234800 Glycine max HOM05D006724 ORTHO05D008514 1.9e-38 162.5 154 55.8
QL08p023685 Quercus lobata HOM05D006724 ORTHO05D008514 1.9e-38 162.5 157 56.1
RcHm_v2.0_Chr5g0032321 Rosa chinensis HOM05D006724 ORTHO05D008514 9.6e-38 160.2 159 51.6
FvH4_3g19250 Fragaria vesca HOM05D006724 ORTHO05D008514 1.6e-37 159.5 159 49.7
FAN11G3114 Fragaria x ananassa HOM05D006724 ORTHO05D008514 1.6e-37 159.5 159 49.7
GSVIVG01014275001 Vitis vinifera HOM05D006724 ORTHO05D008514 2.8e-37 158.7 157 54.1
MD11G1255900 Malus domestica HOM05D006724 ORTHO05D008514 4.8e-37 157.9 159 52.8
CANSAT35G1416 Cannabis sativa HOM05D006724 ORTHO05D008514 1.8e-36 156.0 159 51.6
Thecc.07G098800 Theobroma cacao HOM05D006724 ORTHO05D008514 1.8e-36 156.0 157 52.2
Phvul.011G156700 Phaseolus vulgaris HOM05D006724 ORTHO05D008514 4.0e-36 154.8 154 53.9
Ciclev10010824m.g Citrus clementina HOM05D006724 ORTHO05D008514 1.2e-35 153.3 160 51.9
VMungo1127G0638 Vigna mungo HOM05D006724 ORTHO05D008514 1.5e-35 152.9 154 53.9
Actinidia18778 Actinidia chinensis HOM05D006724 ORTHO05D008514 2.0e-35 152.5 157 52.9
Dinv14945 Davidia involucrata HOM05D006724 ORTHO05D008514 4.5e-35 151.4 155 52.3
Eucgr.F01176 Eucalyptus grandis HOM05D006724 ORTHO05D008514 4.5e-35 151.4 159 48.4
CSS0014927 Camellia sinensis var. sinensis HOM05D006724 ORTHO05D008514 1.7e-34 149.4 159 50.3
Rhsim04G0022800 Rhododendron simsii HOM05D006724 ORTHO05D008514 2.2e-34 149.1 163 48.5
Atru.chr2.2388 Acer truncatum HOM05D006724 ORTHO05D008514 3.8e-34 148.3 157 50.3
Gorai.002G066900 Gossypium raimondii HOM05D006724 ORTHO05D008514 3.8e-34 148.3 157 48.4
CsaV3_4G033360 Cucumis sativus L. HOM05D006724 ORTHO05D008514 4.9e-34 147.9 159 48.4
THA.LOC104818095 Tarenaya hassleriana HOM05D006724 ORTHO05D008514 4.9e-34 147.9 157 49.7
CARHR090120 Cardamine hirsuta HOM05D006724 ORTHO05D008514 6.5e-34 147.5 150 51.3
FAN25G2812 Fragaria x ananassa HOM05D006724 ORTHO05D008514 6.5e-34 147.5 94 71.3
ClCG11G017740 Citrullus lanatus HOM05D006724 ORTHO05D008514 8.4e-34 147.1 159 48.4
AUR62036149 Chenopodium quinoa HOM05D006724 ORTHO05D008514 1.1e-33 146.7 158 47.5
Duzib213G0893 Durio zibethinus HOM05D006724 ORTHO05D008514 1.4e-33 146.4 157 48.4
FAN21G1177 Fragaria x ananassa HOM05D006724 ORTHO05D008514 1.9e-33 146.0 113 61.9
Potri.011G141300 Populus trichocarpa HOM05D006724 ORTHO05D008514 1.9e-33 146.0 157 49.0
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 2.5e-33 145.6 157 48.4
Hma1.2p1_0416F.1_g148420 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 3.2e-33 145.2 157 50.3
Manes.03G104800 Manihot esculenta HOM05D006724 ORTHO05D008514 3.2e-33 145.2 151 50.3
Ca_07350_v3 Cicer arietinum L. HOM05D006724 ORTHO05D008514 4.2e-33 144.8 199 44.2
AT3G15140 Arabidopsis thaliana HOM05D006724 ORTHO05D008514 5.5e-33 144.4 150 48.7
AUR62019487 Chenopodium quinoa HOM05D006724 ORTHO05D008514 5.5e-33 144.4 159 47.2
Sabra11G0126900 Salix brachista HOM05D006724 ORTHO05D008514 7.1e-33 144.1 157 48.4
MELO3C025618.2 Cucumis melo HOM05D006724 ORTHO05D008514 9.3e-33 143.7 159 47.2
Lj8C153G9 Lonicera japonica HOM05D006724 ORTHO05D008514 9.3e-33 143.7 157 50.3
PGSC0003DMG400012400 Solanum tuberosum HOM05D006724 ORTHO05D008514 1.2e-32 143.3 157 48.4
EL10Ac4g08255 Beta vulgaris HOM05D006724 ORTHO05D008514 2.1e-32 142.5 159 46.5
CAN.G162.28 Capsicum annuum HOM05D006724 ORTHO05D008514 2.1e-32 142.5 157 47.1
Solyc07g062750.4 Solanum lycopersicum HOM05D006724 ORTHO05D008514 2.1e-32 142.5 157 48.4
Sopen07g030980 Solanum pennellii HOM05D006724 ORTHO05D008514 2.1e-32 142.5 157 48.4
AL3G27530 Arabidopsis lyrata HOM05D006724 ORTHO05D008514 4.6e-32 141.4 150 48.7
A05p34310 Brassica napus HOM05D006724 ORTHO05D008514 6.0e-32 141.0 150 48.7
BraA05t22252Z Brassica rapa HOM05D006724 ORTHO05D008514 6.0e-32 141.0 150 49.3
Cpa.g.sc80.3 Carica papaya HOM05D006724 ORTHO05D006683 6.0e-32 141.0 151 49.0
Carub.0003s1479 Capsella rubella HOM05D006724 ORTHO05D008514 7.9e-32 140.6 150 48.0
BcaB06g29538 Brassica carinata HOM05D006724 ORTHO05D008514 1.0e-31 140.2 150 48.7
SGA_v2.0_scaffold34G13794 Striga asiatica HOM05D006724 ORTHO05D008514 1.0e-31 140.2 164 48.2
Nn1g04264 Nelumbo nucifera HOM05D006724 ORTHO05D008514 1.3e-31 139.8 111 60.4
Ah.04g164500 Amaranthus hybridus HOM05D006724 ORTHO05D008514 1.8e-31 139.4 159 47.2
C05p52090 Brassica napus HOM05D006724 ORTHO05D008514 1.8e-31 139.4 150 48.7
BolC5t33894H Brassica oleracea HOM05D006724 ORTHO05D008514 1.8e-31 139.4 150 48.7
Sp3g13350 Schrenkiella parvula HOM05D006724 ORTHO05D008514 1.8e-31 139.4 150 48.7
PSO832G3136 Papaver somniferum HOM05D006724 ORTHO05D008514 2.3e-31 139.0 159 45.9
PGR083G0421 Punica granatum HOM05D006724 ORTHO05D008514 2.3e-31 139.0 156 46.2
Peaxi162Scf00069g01835 Petunia axillaris HOM05D006724 ORTHO05D008514 5.1e-31 137.9 157 46.5
Aqoxy4G00685 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 6.7e-31 137.5 157 47.1
MSTRG.15243 Avicennia marina HOM05D006724 ORTHO05D008514 6.7e-31 137.5 162 47.5
Sc03g0010250 Simmondsia chinensis HOM05D006724 ORTHO05D008514 1.1e-30 136.7 157 45.2
Sed0012116 Sechium edule HOM05D006724 ORTHO05D008514 1.9e-30 136.0 159 44.0
DCAR_017120 Daucus carota HOM05D006724 ORTHO05D008514 7.4e-30 134.0 157 47.1
vmacro09520 Vaccinium macrocarpon HOM05D006724 ORTHO05D008514 9.6e-30 133.7 97 67.0
Aqoxy4G00591 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 1.3e-29 133.3 157 45.2
HPP92_003869 Vanilla planifolia HOM05D006724 ORTHO05D008514 2.1e-29 132.5 151 45.0
HPP92_003898 Vanilla planifolia HOM05D006724 ORTHO05D008514 2.1e-29 132.5 151 45.0
Cc05_g11660 Coffea canephora HOM05D006724 ORTHO05D008514 4.8e-29 131.3 156 44.9
Migut.M00774 Erythranthe guttata HOM05D006724 ORTHO05D008514 1.8e-28 129.4 168 42.9
HanXRQChr12g0364011 Helianthus annuus HOM05D006724 ORTHO05D008514 5.3e-28 127.9 159 44.0
unitig_85.g27410 Utricularia gibba HOM05D006724 ORTHO05D008514 9.0e-28 127.1 161 40.4
Nitab4.5_0000246g0080 Nicotiana tabacum HOM05D006724 ORTHO05D008514 1.2e-27 126.7 94 62.8
CDE08G0827 Ceratophyllum demersum HOM05D006724 ORTHO05D008514 3.4e-27 125.2 115 53.9
ECA240G0540 Erigeron canadensis HOM05D006724 ORTHO05D008514 4.5e-27 124.8 158 44.9
Hund22832 Selenicereus undatus HOM05D006724 ORTHO05D008514 5.8e-27 124.4 96 58.3
Lsat_1_v5_gn_9_98661 Lactuca sativa HOM05D006724 ORTHO05D008514 1.0e-26 123.6 150 46.7
Zm00001eb281480 Zea mays HOM05D006724 ORTHO05D008514 1.3e-26 123.2 151 43.7
SalBow8G1625 Salvia bowleyana HOM05D006724 ORTHO05D008514 8.4e-26 120.6 180 39.4
AagrBONN_evm.TU.Sc2ySwM_340.295 Anthoceros agrestis HOM05D006724 ORTHO05D008514 1.1e-25 120.2 152 42.1
Gohir.D01G047400 Gossypium hirsutum HOM05D006724 ORTHO05D008514 7.2e-25 117.5 130 46.2
Mapoly0005s0020 Marchantia polymorpha HOM05D006724 ORTHO05D008514 1.6e-24 116.3 152 41.4
DCAR_013127 Daucus carota HOM05D006724 ORTHO05D008514 2.7e-24 115.5 157 42.0
Pp3c27_5050 Physcomitrium patens HOM05D006724 ORTHO05D008514 3.5e-24 115.2 159 39.6
FAN16G1823 Fragaria x ananassa HOM05D006724 ORTHO05D008514 2.3e-23 112.5 117 47.0
Nitab4.5_0000831g0090 Nicotiana tabacum HOM05D006724 ORTHO05D008514 5.1e-23 111.3 143 45.5
CBR_g4826 Chara braunii HOM05D000829 ORTHO05D008514 9.7e-22 107.1 158 38.6
DCAR_017097 Daucus carota HOM05D006724 ORTHO05D008514 1.3e-21 106.7 159 36.5
Gohir.A01G060866 Gossypium hirsutum HOM05D006724 ORTHO05D008514 1.4e-20 103.2 121 45.5
TWI32G0858 Tripterygium wilfordii HOM05D006724 ORTHO05D008514 1.4e-20 103.2 157 41.4
TAR627G0912 Trochodendron aralioides HOM05D006724 ORTHO05D008514 5.3e-20 101.3 82 59.8
DCAR_013126 Daucus carota HOM05D006724 ORTHO05D008514 5.9e-19 97.8 159 37.7
SMO367G0863 Selaginella moellendorffii HOM05D006724 ORTHO05D008514 7.7e-19 97.4 149 37.6
Hma1.2p1_0416F.1_g148430 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 2.1e-16 89.4 69 62.3
Oeu019299.2 Olea europaea HOM05D006724 ORTHO05D008514 3.9e-15 85.1 68 58.8
Os06g0353400 Oryza sativa ssp. japonica HOM05D006724 ORTHO05D008514 2.8e-13 79.0 71 50.7
unitig_86.g29839 Utricularia gibba HOM05D006724 ORTHO05D008514 1.8e-12 76.3 81 42.0
Gohir.A01G060932 Gossypium hirsutum HOM05D006724 ORTHO05D008514 8.5e-10 67.4 127 35.4
Hma1.2p1_0416F.1_g148440 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 1.9e-09 66.2 93 41.9


User provided reference genes

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