Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.E07VAV Arachis hypogaea HOM05D003719 ORTHO05D004116 3.4e-226 788.1 428 100.0
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 2.1e-66 257.3 334 47.6
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 5.5e-59 232.6 337 42.4
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 1.8e-54 217.6 336 40.8
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 3.4e-53 213.4 332 42.2
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 6.5e-52 209.1 323 43.0
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 2.1e-50 204.1 327 40.7
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 2.1e-50 204.1 327 41.3
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 5.7e-48 196.1 326 39.9
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 1.3e-47 194.9 328 38.7
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 5.3e-46 189.5 359 39.6
arahy.Tifrunner.gnm1.ann1.H68IFY Arachis hypogaea HOM05D003719 ORTHO05D086485 5.0e-44 183.0 137 81.0
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 5.5e-43 179.5 337 38.9
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 1.2e-37 161.8 335 37.3
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 8.0e-34 149.1 336 33.3
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 3.0e-33 147.1 344 32.8
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 5.7e-32 142.9 350 33.7
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 7.5e-32 142.5 338 33.4
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 9.8e-32 142.1 350 32.0
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 1.7e-31 141.4 351 33.6
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 1.7e-31 141.4 348 33.3
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 2.2e-31 141.0 343 32.7
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 2.8e-31 140.6 343 32.7
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 4.8e-31 139.8 341 32.3
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 4.8e-31 139.8 343 32.9
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 1.4e-30 138.3 338 33.4
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 1.8e-30 137.9 345 31.9
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 7.0e-30 136.0 325 33.8
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 1.6e-29 134.8 350 33.1
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 4.5e-29 133.3 351 34.2
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 5.9e-29 132.9 350 33.1
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 7.7e-29 132.5 365 31.5
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 7.7e-29 132.5 345 33.3
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.0e-28 132.1 360 31.4
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 1.7e-28 131.3 322 36.0
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 2.9e-28 130.6 340 32.4
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 6.5e-28 129.4 348 33.6
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 6.5e-28 129.4 347 32.0
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 1.1e-27 128.6 349 31.5
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 1.1e-27 128.6 347 31.4
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 1.9e-27 127.9 349 31.5
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 9.4e-27 125.6 341 30.8
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 2.7e-26 124.0 347 31.7
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 1.0e-25 122.1 346 30.9
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 8.8e-25 119.0 321 31.5
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 3.4e-24 117.1 328 32.3
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 5.7e-24 116.3 346 32.1
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 7.5e-24 115.9 327 30.9
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 9.8e-24 115.5 299 35.5
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 2.8e-23 114.0 326 31.3
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 3.7e-23 113.6 326 31.9
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 2.4e-22 110.9 347 29.1
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 2.4e-22 110.9 334 30.2
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 5.4e-22 109.8 329 30.7
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 5.4e-22 109.8 329 30.7
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 1.2e-21 108.6 331 29.6
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 2.7e-21 107.5 340 32.4
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 3.5e-21 107.1 364 30.2
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 4.5e-21 106.7 358 29.3
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 4.5e-21 106.7 301 32.2
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 4.5e-21 106.7 353 28.9
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 5.0e-20 103.2 351 30.2
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 5.0e-20 103.2 351 30.2
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 5.0e-20 103.2 346 30.9
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 2.5e-19 100.9 339 28.6
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 9.5e-19 99.0 355 29.9
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 2.1e-18 97.8 356 30.6
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 2.8e-18 97.4 356 27.0
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 2.8e-18 97.4 346 28.9
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 3.6e-18 97.1 348 28.4
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 3.6e-18 97.1 348 28.4
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 3.6e-18 97.1 348 28.4
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 3.6e-18 97.1 356 28.9
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 6.1e-18 96.3 359 30.6
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 6.1e-18 96.3 345 29.3
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 6.1e-18 96.3 345 29.3
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 8.0e-18 95.9 326 29.1
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 1.0e-17 95.5 352 28.7
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.8e-17 94.7 351 29.1
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.3e-17 94.4 349 30.7
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.3e-17 94.4 352 27.6
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 3.0e-17 94.0 361 30.5
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 5.2e-17 93.2 307 28.3
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 2.0e-16 91.3 362 28.2
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 2.0e-16 91.3 344 29.4
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 2.6e-16 90.9 346 29.2
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 2.6e-16 90.9 334 30.2
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 5.7e-16 89.7 352 26.7
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 5.7e-16 89.7 331 27.8
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 7.5e-16 89.4 319 27.6
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 1.7e-15 88.2 317 29.7
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 2.9e-15 87.4 343 27.1
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.9e-15 87.4 351 29.3
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 6.3e-15 86.3 350 28.3
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 1.1e-14 85.5 308 26.9
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.8e-14 84.7 355 29.3
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 2.4e-14 84.3 355 29.3
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 4.1e-14 83.6 319 28.2
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 4.1e-14 83.6 346 29.2
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 7.0e-14 82.8 377 26.5
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 1.6e-13 81.6 338 29.0
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 2.0e-13 81.3 355 28.7
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 2.7e-13 80.9 205 33.7
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 4.6e-13 80.1 327 28.1
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 4.6e-13 80.1 336 28.6
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 5.9e-13 79.7 345 28.1
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 5.9e-13 79.7 323 30.0
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 1.0e-12 79.0 323 29.1
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 1.3e-12 78.6 350 27.1
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 1.3e-12 78.6 333 29.7
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 3.9e-12 77.0 308 27.6
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 6.6e-12 76.3 319 27.0
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 8.6e-12 75.9 171 36.3
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 8.6e-12 75.9 171 36.3
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 8.6e-12 75.9 352 25.6
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 1.5e-11 75.1 365 28.2
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 1.5e-11 75.1 354 25.7
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 2.5e-11 74.3 275 29.1
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 3.3e-11 73.9 385 25.2
Migut.O00700 Erythranthe guttata HOM05D003719 ORTHO05D004116 9.5e-11 72.4 158 34.2
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 3.6e-10 70.5 350 27.7
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 3.6e-10 70.5 352 26.7
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 8.0e-10 69.3 315 26.7
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 1.4e-09 68.6 338 28.7
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 1.8e-09 68.2 341 26.4
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.8e-09 68.2 251 29.5
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 2.3e-09 67.8 210 30.5
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 2.3e-09 67.8 318 28.0
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.3e-09 67.8 282 28.0
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 3.1e-09 67.4 318 28.0
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 5.2e-09 66.6 314 27.4
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 6.8e-09 66.2 311 26.4
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 6.8e-09 66.2 330 29.1
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 1.2e-08 65.5 323 26.9
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 5.8e-08 63.2 311 24.8
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 5.8e-08 63.2 273 27.1
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 1.3e-07 62.0 337 25.2
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 1.7e-07 61.6 303 26.1
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 4.9e-07 60.1 300 26.3
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 1.9e-06 58.2 180 28.3
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 9.2e-06 55.8 128 33.6
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 9.2e-06 55.8 128 33.6


User provided reference genes

Program Settings