Gene: Potri.019G044400

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.019G044400
  • Transcript Identifier Potri.019G044400.1
  • Gene Type Coding gene
  • Location Chr19 : 6180071-6186682 : positive

Gene Family Information

  • ID HOM05D003719
  • #Genes/#Species 185/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.019G044400.v4.1
  • pacid 42774138
  • synonym POPTR_0019s06120

Descriptions

  • Description PTHR22812//PTHR22812:SF80 - CHROMOBOX PROTEIN // RE36324P
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G17690
GO:0010048
ISO
PLAZA Integrative Orthologyvernalization response AT5G17690
GO:0010016
ISO
PLAZA Integrative Orthologyshoot system morphogenesis AT5G17690
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G17690
GO:0009825
ISO
PLAZA Integrative Orthologymultidimensional cell growth AT5G17690
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT5G17690
GO:0006325
IEA
InterProchromatin organization
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT5G17690
GO:0045857
ISO
PLAZA Integrative Orthologynegative regulation of molecular function, epigenetic AT5G17690
GO:0009648
ISO
PLAZA Integrative Orthologyphotoperiodism AT5G17690
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic AT5G17690
GO:0006342
IEA
InterProchromatin silencing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003935
ISO
PLAZA Integrative OrthologyGTP cyclohydrolase II activity AT5G17690
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G17690
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G17690
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT5G17690
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT5G17690
GO:0008686
ISO
PLAZA Integrative Orthology3,4-dihydroxy-2-butanone-4-phosphate synthase activity AT5G17690
GO:0035064
ISO
PLAZA Integrative Orthologymethylated histone binding AT5G17690
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT5G17690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT5G17690
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G17690
GO:0000792
ISO
PLAZA Integrative Orthologyheterochromatin AT5G17690
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044251 Chromo domain-containing protein LHP1
IPR016197 Chromo-like domain superfamily
IPR008251 Chromo shadow domain
IPR017984 Chromo domain subgroup
IPR023780 Chromo domain
IPR000953 Chromo/chromo shadow domain
Mapman id Description
12.3.6.1.4 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.core components.modification reader component LHP1