Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.CZ80LA Arachis hypogaea HOM05D007082 ORTHO05D008895 9.2e-96 353.6 184 100.0
arahy.Tifrunner.gnm1.ann1.4F6QX0 Arachis hypogaea HOM05D007082 ORTHO05D008895 6.8e-91 337.4 185 96.8
Lalb_Chr10g0095561 Lupinus albus HOM05D007082 ORTHO05D008895 4.6e-63 245.0 162 72.2
Lj2g0002316 Lotus japonicus HOM05D007082 ORTHO05D008895 2.1e-60 236.1 164 70.1
CiPaw.07G089100 Carya illinoinensis HOM05D007082 ORTHO05D008895 1.2e-55 220.3 156 69.2
Psat6g025560 Pisum sativum HOM05D007082 ORTHO05D008895 6.0e-55 218.0 158 63.3
Haze_04674 Corylus avellana HOM05D007082 ORTHO05D008895 1.3e-54 216.9 157 67.5
TPR.G34570 Trifolium pratense HOM05D007082 ORTHO05D008895 1.7e-54 216.5 158 65.2
Cfa004492 Carpinus fangiana HOM05D007082 ORTHO05D008895 2.3e-54 216.1 157 68.8
Medtr5g020430 Medicago truncatula HOM05D007082 ORTHO05D008895 3.0e-54 215.7 158 63.9
MD03G1260600 Malus domestica HOM05D007082 ORTHO05D008895 1.1e-53 213.8 163 65.6
Sed0015110 Sechium edule HOM05D007082 ORTHO05D008895 1.9e-53 213.0 164 62.8
Medtr1g033230 Medicago truncatula HOM05D007082 ORTHO05D008895 3.3e-53 212.2 158 62.7
RcHm_v2.0_Chr6g0290411 Rosa chinensis HOM05D007082 ORTHO05D008895 5.6e-53 211.5 161 64.6
Haze_10047 Corylus avellana HOM05D007082 ORTHO05D008895 7.3e-53 211.1 157 66.2
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 7.3e-53 211.1 164 64.6
Potri.005G212900 Populus trichocarpa HOM05D007082 ORTHO05D008895 1.6e-52 209.9 164 61.0
TWI12G0539 Tripterygium wilfordii HOM05D007082 ORTHO05D008895 3.6e-52 208.8 163 63.2
Haze_10052 Corylus avellana HOM05D007082 ORTHO05D008895 4.8e-52 208.4 157 65.6
CSS0021912 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 1.4e-51 206.8 161 65.2
CSS0029740 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 1.4e-51 206.8 161 65.2
CANSAT25G2376 Cannabis sativa HOM05D007082 ORTHO05D008895 1.4e-51 206.8 161 64.6
FvH4_2g23151 Fragaria vesca HOM05D007082 ORTHO05D008895 1.4e-51 206.8 159 62.9
FAN20G2212 Fragaria x ananassa HOM05D007082 ORTHO05D008895 1.4e-51 206.8 159 62.3
Psat6g050280 Pisum sativum HOM05D007082 ORTHO05D008895 4.0e-51 205.3 158 61.4
QL12p020738 Quercus lobata HOM05D007082 ORTHO05D008895 2.0e-50 203.0 159 62.3
Dinv32900 Davidia involucrata HOM05D007082 ORTHO05D008895 2.6e-50 202.6 158 62.7
TAR622G1184 Trochodendron aralioides HOM05D007082 ORTHO05D008895 3.4e-50 202.2 161 60.9
Glyma.08G176000 Glycine max HOM05D007082 ORTHO05D008895 1.7e-49 199.9 159 62.3
Ciclev10022619m.g Citrus clementina HOM05D007082 ORTHO05D008895 2.2e-49 199.5 162 59.9
Oeu025749.1 Olea europaea HOM05D007082 ORTHO05D008895 2.2e-49 199.5 158 62.7
Thecc.05G027700 Theobroma cacao HOM05D007082 ORTHO05D008895 4.9e-49 198.4 158 59.5
Nn5g27058 Nelumbo nucifera HOM05D007082 ORTHO05D008895 6.4e-49 198.0 161 60.2
Lj2P1167T48 Lonicera japonica HOM05D007082 ORTHO05D008895 1.1e-48 197.2 159 59.7
Lsat_1_v5_gn_9_86820 Lactuca sativa HOM05D007082 ORTHO05D008895 1.4e-48 196.8 159 60.4
PGR119G0159 Punica granatum HOM05D007082 ORTHO05D008895 2.4e-48 196.1 154 64.3
MSTRG.18253 Avicennia marina HOM05D007082 ORTHO05D008895 3.2e-48 195.7 158 58.2
Manes.01G205300 Manihot esculenta HOM05D007082 ORTHO05D008895 3.2e-48 195.7 155 65.2
Atru.chr5.1487 Acer truncatum HOM05D000296 ORTHO05D000175 7.1e-48 194.5 164 60.4
Rhsim13G0027400 Rhododendron simsii HOM05D007082 ORTHO05D008895 1.2e-47 193.7 158 61.4
Eucgr.H01442 Eucalyptus grandis HOM05D007082 ORTHO05D008895 2.1e-47 193.0 151 62.9
Eucgr.H01429 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.6e-47 191.8 151 62.9
Eucgr.H01435 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.6e-47 191.8 152 62.5
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 4.6e-47 191.8 152 61.2
ClCG07G000420 Citrullus lanatus HOM05D007082 ORTHO05D008895 1.8e-46 189.9 159 56.6
MELO3C014298.2 Cucumis melo HOM05D007082 ORTHO05D008895 2.3e-46 189.5 159 58.5
CsaV3_2G013600 Cucumis sativus L. HOM05D007082 ORTHO05D008895 3.0e-46 189.1 159 58.5
DCAR_002714 Daucus carota HOM05D007082 ORTHO05D008895 3.0e-46 189.1 165 60.6
HanXRQChr05g0154391 Helianthus annuus HOM05D007082 ORTHO05D008895 5.1e-46 188.3 159 57.2
SalBow4G2456 Salvia bowleyana HOM05D007082 ORTHO05D008895 5.1e-46 188.3 156 57.1
VMungo1215G3041 Vigna mungo HOM05D007082 ORTHO05D008895 5.1e-46 188.3 157 61.8
Eucgr.H01418 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.5e-45 186.8 148 62.8
vmacro14749 Vaccinium macrocarpon HOM05D007082 ORTHO05D008895 1.9e-45 186.4 153 59.5
Lsat_1_v5_gn_9_6120 Lactuca sativa HOM05D007082 ORTHO05D008895 2.5e-45 186.0 159 58.5
CAN.G410.16 Capsicum annuum HOM05D007082 ORTHO05D008895 5.6e-45 184.9 152 58.6
Duzib128G1180 Durio zibethinus HOM05D007082 ORTHO05D008895 5.6e-45 184.9 160 58.8
Sopen01g035010 Solanum pennellii HOM05D007082 ORTHO05D008895 9.6e-45 184.1 155 58.1
SGA_v2.0_scaffold1G00512 Striga asiatica HOM05D007082 ORTHO05D008895 9.6e-45 184.1 159 57.9
Migut.D00329 Erythranthe guttata HOM05D007082 ORTHO05D008895 1.3e-44 183.7 159 54.7
Cc01_g19180 Coffea canephora HOM05D007082 ORTHO05D008895 4.8e-44 181.8 156 56.4
Ah.11g050380 Amaranthus hybridus HOM05D007082 ORTHO05D008895 1.1e-43 180.6 163 56.4
PSO832G2607 Papaver somniferum HOM05D007082 ORTHO05D008895 1.4e-43 180.3 164 53.0
Hund09516 Selenicereus undatus HOM05D007082 ORTHO05D008895 1.4e-43 180.3 160 58.1
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 1.8e-43 179.9 159 57.9
COL.COLO4_14680 Corchorus olitorius HOM05D007082 ORTHO05D008895 4.0e-43 178.7 153 56.9
Nitab4.5_0016351g0010 Nicotiana tabacum HOM05D007082 ORTHO05D008895 4.0e-43 178.7 154 55.2
PSO210G1980 Papaver somniferum HOM05D007082 ORTHO05D008895 5.3e-43 178.3 165 52.1
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 9.0e-43 177.6 158 57.0
Phvul.003G015400 Phaseolus vulgaris HOM05D007082 ORTHO05D008895 2.0e-42 176.4 146 63.0
MBI19_g34822_MAGBIO Magnolia biondii HOM05D007082 ORTHO05D008895 4.5e-42 175.3 153 56.2
Gorai.001G088200 Gossypium raimondii HOM05D007082 ORTHO05D008895 3.8e-41 172.2 153 55.6
Gohir.D07G082600 Gossypium hirsutum HOM05D007082 ORTHO05D008895 8.4e-41 171.0 153 55.6
Cpa.g.sc41.65 Carica papaya HOM05D007082 ORTHO05D008895 5.5e-40 168.3 148 55.4
Lj3g0026065 Lotus japonicus HOM05D007082 ORTHO05D008895 7.1e-40 167.9 127 66.1
SHI10976 Sapria himalayana HOM05D007082 ORTHO05D008895 6.0e-39 164.9 155 54.8
ECA247G0055 Erigeron canadensis HOM05D007082 ORTHO05D008895 2.3e-38 162.9 123 63.4
EL10Ac5g10526 Beta vulgaris HOM05D007082 ORTHO05D008895 2.5e-37 159.5 158 53.2
AL1G17250 Arabidopsis lyrata HOM05D007082 ORTHO05D008895 3.3e-37 159.1 163 49.7
CARHR006820 Cardamine hirsuta HOM05D007082 ORTHO05D008895 2.1e-36 156.4 162 49.4
THA.LOC104800748 Tarenaya hassleriana HOM05D007082 ORTHO05D008895 2.8e-36 156.0 162 50.6
SEGI_21621 Sequoiadendron giganteum HOM05D007082 ORTHO05D008895 3.7e-36 155.6 159 50.9
HanXRQChr16g0516211 Helianthus annuus HOM05D007082 ORTHO05D008895 1.1e-35 154.1 144 56.2
Sc05g0001390 Simmondsia chinensis HOM05D007082 ORTHO05D008895 1.4e-35 153.7 151 52.3
Aa31LG5G6620 Aethionema arabicum HOM05D007082 ORTHO05D008895 4.1e-35 152.1 161 50.3
Carub.0001s0641 Capsella rubella HOM05D007082 ORTHO05D008895 4.1e-35 152.1 161 48.4
Zm00001eb394240 Zea mays HOM05D007082 ORTHO05D008895 2.0e-34 149.8 163 47.2
Eucgr.L00806 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.5e-34 148.7 151 51.0
Gohir.A07G077800 Gossypium hirsutum HOM05D007082 ORTHO05D008895 4.5e-34 148.7 153 52.3
Sp1g05880 Schrenkiella parvula HOM05D007082 ORTHO05D008895 4.5e-34 148.7 162 46.9
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 5.8e-34 148.3 153 48.4
AT1G07130 Arabidopsis thaliana HOM05D007082 ORTHO05D008895 1.3e-33 147.1 162 46.3
CDE05G2411 Ceratophyllum demersum HOM05D007082 ORTHO05D008895 1.3e-33 147.1 162 48.1
Os03g0366900 Oryza sativa ssp. japonica HOM05D007082 ORTHO05D008895 1.3e-33 147.1 155 47.7
Thhalv10008979m.g Eutrema salsugineum HOM05D007082 ORTHO05D008895 1.7e-33 146.7 162 45.7
MD15G1065600 Malus domestica HOM05D007082 ORTHO05D008895 8.4e-33 144.4 130 60.8
A08p35770 Brassica napus HOM05D007082 ORTHO05D008895 1.1e-32 144.1 162 45.7
BraA08t35483Z Brassica rapa HOM05D007082 ORTHO05D008895 1.1e-32 144.1 162 45.7
BolC8t47089H Brassica oleracea HOM05D007082 ORTHO05D008895 1.4e-32 143.7 162 45.1
C08p02920 Brassica napus HOM05D007082 ORTHO05D008895 1.9e-32 143.3 156 46.2
Medtr5g020340 Medicago truncatula HOM05D000096 ORTHO05D008895 6.1e-31 138.3 130 52.3
AUR62032313 Chenopodium quinoa HOM05D007082 ORTHO05D008895 3.9e-30 135.6 163 49.1
BcaB03g13405 Brassica carinata HOM05D007082 ORTHO05D008895 8.7e-30 134.4 161 42.2
BolC8t47080H Brassica oleracea HOM05D007082 ORTHO05D008895 8.7e-30 134.4 156 44.2
AUR62011993 Chenopodium quinoa HOM05D007082 ORTHO05D008895 1.1e-29 134.0 163 48.5
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 4.8e-28 128.6 159 47.8
C08p02850 Brassica napus HOM05D007082 ORTHO05D008895 8.2e-28 127.9 166 39.2
Pp3c1_6180 Physcomitrium patens HOM05D007082 ORTHO05D008895 4.1e-27 125.6 162 38.9
Mapoly0041s0121 Marchantia polymorpha HOM05D007082 ORTHO05D008895 2.6e-26 122.9 161 39.1
Aqoxy5G02465 Aquilegia oxysepala HOM05D007082 ORTHO05D008895 3.8e-25 119.0 155 45.2
ATR0580G091 Amborella trichopoda HOM05D007082 ORTHO05D008895 8.5e-25 117.9 155 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1416 Anthoceros agrestis HOM05D007082 ORTHO05D008895 2.2e-17 93.2 152 33.6
Actinidia09115 Actinidia chinensis HOM05D007082 ORTHO05D008895 3.2e-16 89.4 61 63.9
MCO14G264 Micromonas commoda HOM05D007082 ORTHO05D008895 3.5e-10 69.3 116 36.2
SMO307G0023 Selaginella moellendorffii HOM05D007082 ORTHO05D008895 5.5e-08 62.0 102 34.3
Sc05g0001360 Simmondsia chinensis HOM05D007082 ORTHO05D008895 1.6e-07 60.5 142 33.8


User provided reference genes

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