Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 1.2e-119 434.1 412 100.0
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 5.6e-101 372.1 390 97.4
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 1.8e-67 260.8 341 93.0
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 1.4e-64 251.1 333 94.0
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 1.4e-56 224.6 328 88.4
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 1.6e-55 221.1 328 86.3
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.0e-54 216.9 336 86.6
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.0e-54 216.9 336 86.6
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 8.7e-54 215.3 336 86.9
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 1.3e-52 211.5 336 82.4
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 1.5e-50 204.5 330 86.7
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 1.0e-49 201.8 336 81.8
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 5.0e-49 199.5 332 82.2
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 9.3e-48 195.3 377 69.0
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.2e-47 194.9 330 81.2
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 1.0e-46 191.8 329 82.1
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 1.3e-46 191.4 330 80.6
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.8e-46 191.0 326 71.8
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 1.8e-46 191.0 329 82.1
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 3.9e-46 189.9 329 77.5
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 6.7e-46 189.1 329 79.0
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 2.5e-45 187.2 329 82.1
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 2.5e-45 187.2 323 83.6
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 4.3e-45 186.4 329 81.5
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 2.8e-44 183.7 330 80.3
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 6.3e-44 182.6 329 81.5
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 1.1e-43 181.8 329 81.2
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 2.4e-43 180.6 329 65.0
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 6.9e-43 179.1 328 73.5
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 9.0e-43 178.7 327 79.8
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 1.2e-42 178.3 336 79.2
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.2e-42 178.3 328 75.9
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 1.2e-42 178.3 302 89.4
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 1.5e-42 177.9 328 72.9
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 1.5e-42 177.9 327 82.0
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 1.5e-42 177.9 329 80.5
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 1.5e-42 177.9 332 81.9
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 4.5e-42 176.4 329 81.2
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 5.9e-42 176.0 327 82.0
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 5.9e-42 176.0 328 79.9
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 5.9e-42 176.0 356 75.8
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 7.7e-42 175.6 328 79.6
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 1.7e-41 174.5 329 78.7
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 1.7e-41 174.5 324 79.6
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 3.2e-40 170.2 328 72.3
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 3.2e-40 170.2 326 80.1
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 7.2e-40 169.1 328 74.1
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 1.2e-39 168.3 328 79.0
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 1.6e-39 167.9 329 79.3
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 1.6e-39 167.9 329 79.0
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 2.1e-39 167.5 334 78.1
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 4.6e-39 166.4 319 82.4
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 1.0e-38 165.2 334 71.0
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 1.4e-38 164.9 326 75.8
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 1.4e-38 164.9 328 77.4
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 2.3e-38 164.1 326 77.9
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 2.3e-38 164.1 333 78.4
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 5.1e-38 162.9 322 77.0
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.1e-37 161.8 329 72.0
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 1.1e-37 161.8 326 76.1
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 1.1e-37 161.8 317 80.1
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 1.5e-37 161.4 340 74.4
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 2.6e-37 160.6 329 78.1
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 3.3e-37 160.2 329 79.3
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 4.3e-37 159.8 286 90.9
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 5.7e-37 159.5 327 72.8
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 7.4e-37 159.1 316 80.1
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 3.7e-36 156.8 329 75.1
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 4.8e-36 156.4 316 79.4
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 1.4e-35 154.8 327 75.5
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 4.1e-35 153.3 327 74.3
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 4.1e-35 153.3 327 74.3
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 6.9e-35 152.5 312 82.4
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 6.9e-35 152.5 318 74.8
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 9.1e-35 152.1 329 76.0
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 2.9e-33 147.1 329 79.0
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 5.0e-33 146.4 329 79.0
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 2.5e-32 144.1 343 74.6
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 4.2e-32 143.3 325 68.3
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 2.1e-31 141.0 328 73.5
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 1.4e-30 138.3 318 77.4
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 6.7e-30 136.0 333 65.5
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 8.8e-30 135.6 328 65.2
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.5e-29 134.8 328 66.8
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 2.0e-29 134.4 310 77.7
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 3.3e-29 133.7 333 70.9
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.3e-28 131.7 322 68.0
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 2.2e-28 131.0 328 64.9
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 4.8e-28 129.8 330 65.2
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 1.6e-26 124.8 319 66.5
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 1.6e-26 124.8 328 43.0
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 7.7e-26 122.5 86 65.1
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 5.5e-24 116.3 335 67.8
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 5.5e-24 116.3 335 67.8
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 5.5e-24 116.3 80 67.5
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 7.2e-24 115.9 330 68.2
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 7.2e-24 115.9 335 67.8
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 3.6e-23 113.6 86 52.3
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 8.0e-23 112.5 334 51.2
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.0e-22 112.1 86 55.8
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 1.0e-22 112.1 302 76.2
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 2.6e-21 107.5 305 75.1
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 8.2e-20 102.4 330 58.5
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.3e-17 95.1 65 69.2
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 5.0e-17 93.2 86 53.5
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.7e-15 87.4 56 62.5
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.4e-14 85.1 318 68.2
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 1.4e-14 85.1 57 68.4
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.5e-13 81.6 57 66.7
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.5e-13 81.6 60 60.0
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 1.0e-09 68.9 83 43.4
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 1.0e-09 68.9 58 55.2
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 3.2e-08 63.9 67 49.3
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 5.5e-08 63.2 61 41.0
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 2.1e-07 61.2 58 43.1
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 2.7e-07 60.8 61 44.3
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 2.7e-07 60.8 42 59.5
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 6.1e-07 59.7 58 41.4
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 6.1e-07 59.7 58 41.4
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 6.1e-07 59.7 58 41.4
TPR.G21350 Trifolium pratense HOM05D005956 ORTHO05D007197 8.0e-07 59.3 61 42.6
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 8.0e-07 59.3 86 40.7
Ah.05g168390 Amaranthus hybridus HOM05D005956 ORTHO05D007197 1.0e-06 58.9 66 42.4
PGR083G0114 Punica granatum HOM05D005956 ORTHO05D007197 1.0e-06 58.9 59 40.7
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.0e-06 58.9 58 48.3
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 1.4e-06 58.5 59 42.4
Duzib192G0068 Durio zibethinus HOM05D005956 ORTHO05D007197 1.8e-06 58.2 57 42.1
Medtr6g003960 Medicago truncatula HOM05D005956 ORTHO05D007197 1.8e-06 58.2 61 41.0
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 2.3e-06 57.8 61 42.6
LjContig00482g0022414 Lotus japonicus HOM05D005956 ORTHO05D007197 2.3e-06 57.8 61 44.3
Rhsim08G0251500 Rhododendron simsii HOM05D005956 ORTHO05D007197 2.3e-06 57.8 57 40.4
CAN.G790.4 Capsicum annuum HOM05D005956 ORTHO05D007197 3.0e-06 57.4 64 37.5
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 3.0e-06 57.4 56 44.6
Sed0023146 Sechium edule HOM05D005956 ORTHO05D007197 4.0e-06 57.0 59 40.7
Atru.chr1.2600 Acer truncatum HOM05D005956 ORTHO05D007197 5.2e-06 56.6 59 40.7
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 5.2e-06 56.6 61 41.0
Manes.14G006900 Manihot esculenta HOM05D005956 ORTHO05D007197 5.2e-06 56.6 57 42.1
SalBow8G3086 Salvia bowleyana HOM05D005956 ORTHO05D007197 6.8e-06 56.2 58 43.1
Actinidia21896 Actinidia chinensis HOM05D005956 ORTHO05D007197 8.8e-06 55.8 53 41.5
AT1G78930 Arabidopsis thaliana HOM05D005956 ORTHO05D007197 8.8e-06 55.8 58 43.1
Lalb_Chr24g0392721 Lupinus albus HOM05D005956 ORTHO05D007197 8.8e-06 55.8 61 41.0
Pp3c18_18510 Physcomitrium patens HOM05D005956 ORTHO05D007197 8.8e-06 55.8 61 41.0


User provided reference genes

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