Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7I309S Arachis hypogaea HOM05D004619 ORTHO05D005738 2.5e-77 292.0 141 100.0
arahy.Tifrunner.gnm1.ann1.2KYU87 Arachis hypogaea HOM05D004619 ORTHO05D005738 2.6e-58 228.8 125 92.0
arahy.Tifrunner.gnm1.ann1.VKWI5R Arachis hypogaea HOM05D004619 ORTHO05D005738 2.2e-57 225.7 125 92.0
arahy.Tifrunner.gnm1.ann1.EP17SZ Arachis hypogaea HOM05D004619 ORTHO05D005738 2.4e-48 195.7 108 90.7
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea HOM05D004619 ORTHO05D005738 4.6e-39 164.9 117 74.4
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea HOM05D004619 ORTHO05D005738 6.0e-39 164.5 117 74.4
arahy.Tifrunner.gnm1.ann1.6B1VGR Arachis hypogaea HOM05D004619 ORTHO05D005738 5.1e-38 161.4 114 76.3
Ca_12754_v3 Cicer arietinum L. HOM05D004619 ORTHO05D005738 1.5e-34 149.8 117 69.2
Medtr1g006690 Medicago truncatula HOM05D004619 ORTHO05D005738 7.6e-34 147.5 100 78.0
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 1.7e-33 146.4 117 67.5
Psat7g196840 Pisum sativum HOM05D004619 ORTHO05D005738 1.7e-33 146.4 117 67.5
Lalb_Chr14g0362511 Lupinus albus HOM05D004619 ORTHO05D005738 2.9e-33 145.6 117 67.5
TPR.G24498 Trifolium pratense HOM05D004619 ORTHO05D005738 3.8e-33 145.2 117 66.7
Duzib168G0872 Durio zibethinus HOM05D004619 ORTHO05D005738 1.4e-32 143.3 125 61.6
Glyma.17G193800 Glycine max HOM05D004619 ORTHO05D005738 3.2e-32 142.1 117 65.0
Ciclev10007610m.g Citrus clementina HOM05D004619 ORTHO05D005738 7.2e-32 141.0 119 61.3
Gohir.A06G092700 Gossypium hirsutum HOM05D004619 ORTHO05D005738 7.2e-32 141.0 117 63.2
Thecc.09G045500 Theobroma cacao HOM05D004619 ORTHO05D005738 7.2e-32 141.0 117 65.0
Gohir.D06G092300 Gossypium hirsutum HOM05D004619 ORTHO05D005738 9.3e-32 140.6 117 62.4
Gorai.010G106300 Gossypium raimondii HOM05D004619 ORTHO05D005738 9.3e-32 140.6 117 62.4
COL.COLO4_20972 Corchorus olitorius HOM05D004619 ORTHO05D005738 3.6e-31 138.7 117 62.4
Phvul.001G074000 Phaseolus vulgaris HOM05D004619 ORTHO05D005738 3.6e-31 138.7 85 80.0
Lj1g0001172 Lotus japonicus HOM05D004619 ORTHO05D005738 4.6e-31 138.3 100 74.0
GSVIVG01035621001 Vitis vinifera HOM05D004619 ORTHO05D005738 1.3e-30 136.7 100 69.0
CSS0048446 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 1.8e-30 136.3 98 69.4
QL12p041325 Quercus lobata HOM05D004619 ORTHO05D005738 1.8e-30 136.3 102 66.7
THA.LOC104803757 Tarenaya hassleriana HOM05D004619 ORTHO05D005738 3.9e-30 135.2 89 70.8
RcHm_v2.0_Chr6g0306261 Rosa chinensis HOM05D004619 ORTHO05D005738 5.1e-30 134.8 130 56.9
CSS0016966 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 8.7e-30 134.0 87 72.4
Atru.chr7.2086 Acer truncatum HOM05D004619 ORTHO05D005738 1.5e-29 133.3 119 58.0
Cfa013367 Carpinus fangiana HOM05D004619 ORTHO05D005738 1.5e-29 133.3 119 58.0
FvH4_2g35520 Fragaria vesca HOM05D004619 ORTHO05D005738 1.5e-29 133.3 130 55.4
FAN27G0819 Fragaria x ananassa HOM05D004619 ORTHO05D005738 1.5e-29 133.3 130 55.4
Thhalv10024536m.g Eutrema salsugineum HOM05D004619 ORTHO05D005738 1.9e-29 132.9 89 70.8
MD15G1093200 Malus domestica HOM05D004619 ORTHO05D005738 2.5e-29 132.5 113 61.9
BcaC09g52090 Brassica carinata HOM05D004619 ORTHO05D005738 4.3e-29 131.7 89 69.7
BcaC09g52091 Brassica carinata HOM05D004619 ORTHO05D005738 4.3e-29 131.7 89 69.7
C01p05790 Brassica napus HOM05D004619 ORTHO05D005738 4.3e-29 131.7 89 69.7
Eucgr.C00551 Eucalyptus grandis HOM05D004619 ORTHO05D005738 5.7e-29 131.3 100 66.0
Eucgr.C00596 Eucalyptus grandis HOM05D004619 ORTHO05D005738 5.7e-29 131.3 100 66.0
FAN20G0141 Fragaria x ananassa HOM05D004619 ORTHO05D005738 5.7e-29 131.3 130 54.6
Aqoxy7G03899 Aquilegia oxysepala HOM05D004619 ORTHO05D005738 9.7e-29 130.6 85 71.8
A01p05370 Brassica napus HOM05D004619 ORTHO05D005738 9.7e-29 130.6 89 69.7
BolC1t00559H Brassica oleracea HOM05D004619 ORTHO05D005738 9.7e-29 130.6 89 68.5
CANSAT25G1337 Cannabis sativa HOM05D004619 ORTHO05D005738 9.7e-29 130.6 100 65.0
Carub.0007s0758 Capsella rubella HOM05D004619 ORTHO05D005738 9.7e-29 130.6 89 67.4
Haze_21890 Corylus avellana HOM05D004619 ORTHO05D005738 9.7e-29 130.6 102 64.7
Manes.16G075300 Manihot esculenta HOM05D004619 ORTHO05D005738 9.7e-29 130.6 87 71.3
Sabra18G0044100 Salix brachista HOM05D004619 ORTHO05D005738 9.7e-29 130.6 102 63.7
Sabra18G0044200 Salix brachista HOM05D004619 ORTHO05D005738 9.7e-29 130.6 102 63.7
SHI18685 Sapria himalayana HOM05D004619 ORTHO05D005738 9.7e-29 130.6 98 69.4
CARHR240910 Cardamine hirsuta HOM05D004619 ORTHO05D005738 1.3e-28 130.2 89 69.7
HPP92_005572 Vanilla planifolia HOM05D004619 ORTHO05D005738 1.3e-28 130.2 100 62.0
Lj8A581G22 Lonicera japonica HOM05D004619 ORTHO05D005738 1.6e-28 129.8 119 56.3
Aa31sc131G40 Aethionema arabicum HOM05D004619 ORTHO05D005738 2.2e-28 129.4 89 69.7
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 2.2e-28 129.4 87 70.1
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 2.2e-28 129.4 87 70.1
Sed0007447 Sechium edule HOM05D004619 ORTHO05D005738 2.2e-28 129.4 102 64.7
CiPaw.07G204000 Carya illinoinensis HOM05D004619 ORTHO05D005738 2.8e-28 129.0 87 70.1
Oeu031693.1 Olea europaea HOM05D004619 ORTHO05D005738 3.7e-28 128.6 119 55.5
AT4G32910 Arabidopsis thaliana HOM05D004619 ORTHO05D005738 4.8e-28 128.3 89 67.4
Prupe.1G448000 Prunus persica HOM05D004619 ORTHO05D005738 4.8e-28 128.3 119 55.5
TAR636G2525 Trochodendron aralioides HOM05D004619 ORTHO05D005738 6.3e-28 127.9 117 56.4
BraA01t00511Z Brassica rapa HOM05D004619 ORTHO05D005738 1.1e-27 127.1 89 67.4
MELO3C011139.2 Cucumis melo HOM05D004619 ORTHO05D005738 1.1e-27 127.1 117 58.1
Dinv27905 Davidia involucrata HOM05D004619 ORTHO05D005738 1.1e-27 127.1 102 63.7
Nn8g39783 Nelumbo nucifera HOM05D004619 ORTHO05D005738 1.1e-27 127.1 87 67.8
Actinidia15739 Actinidia chinensis HOM05D004619 ORTHO05D005738 1.4e-27 126.7 102 63.7
AL7G18800 Arabidopsis lyrata HOM05D004619 ORTHO05D005738 2.4e-27 125.9 89 65.2
CAN.G400.8 Capsicum annuum HOM05D004619 ORTHO05D005738 2.4e-27 125.9 119 55.5
CsaV3_2G030840 Cucumis sativus L. HOM05D004619 ORTHO05D005738 2.4e-27 125.9 117 57.3
Solyc08g066580.4 Solanum lycopersicum HOM05D004619 ORTHO05D005738 3.1e-27 125.6 119 55.5
Sp7g30680 Schrenkiella parvula HOM05D004619 ORTHO05D005738 4.1e-27 125.2 89 67.4
Cpa.g.c44012 Carica papaya HOM05D004619 ORTHO05D005738 5.3e-27 124.8 115 58.3
Rhsim07G0146900 Rhododendron simsii HOM05D004619 ORTHO05D005738 6.9e-27 124.4 113 58.4
MBI01_g18389_MAGBIO Magnolia biondii HOM05D004619 ORTHO05D005738 1.2e-26 123.6 117 55.6
Sopen08g020420 Solanum pennellii HOM05D004619 ORTHO05D005738 1.2e-26 123.6 119 54.6
ClCG08G012210 Citrullus lanatus HOM05D004619 ORTHO05D005738 1.5e-26 123.2 102 61.8
vmacro05371 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 1.5e-26 123.2 87 65.5
vmacro23276 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 1.5e-26 123.2 87 65.5
AUR62039705 Chenopodium quinoa HOM05D004619 ORTHO05D005738 2.0e-26 122.9 87 64.4
Sc23g0005210 Simmondsia chinensis HOM05D004619 ORTHO05D005738 2.0e-26 122.9 87 65.5
EL10Ac2g04016 Beta vulgaris HOM05D004619 ORTHO05D005738 2.6e-26 122.5 85 68.2
CDE02G4285 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 2.6e-26 122.5 85 68.2
Hund19512 Selenicereus undatus HOM05D004619 ORTHO05D005738 2.6e-26 122.5 119 53.8
Peaxi162Scf00227g00812 Petunia axillaris HOM05D004619 ORTHO05D005738 4.5e-26 121.7 119 52.9
SalBow1G6937 Salvia bowleyana HOM05D004619 ORTHO05D005738 4.5e-26 121.7 102 58.8
AUR62009276 Chenopodium quinoa HOM05D004619 ORTHO05D005738 7.7e-26 120.9 87 64.4
Nitab4.5_0001515g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 1.0e-25 120.6 124 53.2
Os01g0746200 Oryza sativa ssp. japonica HOM05D004619 ORTHO05D005738 1.0e-25 120.6 100 59.0
DCAR_004468 Daucus carota HOM05D004619 ORTHO05D005738 1.7e-25 119.8 117 52.1
unitig_578.g16586 Utricularia gibba HOM05D004619 ORTHO05D005738 1.7e-25 119.8 88 63.6
Ah.10g035010 Amaranthus hybridus HOM05D004619 ORTHO05D005738 3.8e-25 118.6 87 63.2
Nitab4.5_0003794g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 8.5e-25 117.5 130 50.0
PSO210G5473 Papaver somniferum HOM05D004619 ORTHO05D005738 8.5e-25 117.5 84 67.9
PSO210G6185 Papaver somniferum HOM05D004619 ORTHO05D005738 8.5e-25 117.5 84 67.9
ATR0705G091 Amborella trichopoda HOM05D004619 ORTHO05D005738 1.1e-24 117.1 85 62.4
ECA233G0099 Erigeron canadensis HOM05D004619 ORTHO05D005738 2.5e-24 115.9 87 60.9
SGA_v2.0_scaffold169G38654 Striga asiatica HOM05D004619 ORTHO05D005738 4.2e-24 115.2 87 59.8
Cc08_g09590 Coffea canephora HOM05D004619 ORTHO05D005738 5.5e-24 114.8 98 57.1
Migut.E01528 Erythranthe guttata HOM05D004619 ORTHO05D005738 5.5e-24 114.8 98 55.1
MSTRG.1660 Avicennia marina HOM05D004619 ORTHO05D005738 7.2e-24 114.4 102 56.9
HanXRQChr13g0402061 Helianthus annuus HOM05D004619 ORTHO05D005738 9.4e-24 114.0 100 57.0
Lsat_1_v5_gn_6_23120 Lactuca sativa HOM05D004619 ORTHO05D005738 9.4e-24 114.0 110 57.3
Zm00001eb152980 Zea mays HOM05D004619 ORTHO05D005738 1.4e-22 110.2 85 62.4
Pp3c16_3750 Physcomitrium patens HOM05D004619 ORTHO05D005738 1.8e-19 99.8 100 52.0
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis HOM05D004619 ORTHO05D005738 1.7e-17 93.2 81 56.8
Mapoly0014s0066 Marchantia polymorpha HOM05D004619 ORTHO05D005738 4.2e-16 88.6 81 51.9
VMungo0647G1361 Vigna mungo HOM05D004619 ORTHO05D005738 4.2e-16 88.6 48 81.2
Lsat_1_v5_gn_8_1401 Lactuca sativa HOM05D004619 ORTHO05D005738 1.8e-14 83.2 62 62.9
PGR031G0242 Punica granatum HOM05D004619 ORTHO05D005738 3.9e-14 82.0 45 80.0
Actinidia14677 Actinidia chinensis HOM05D004619 ORTHO05D005738 7.0e-11 71.2 58 56.9
Potri.018G044300 Populus trichocarpa HOM05D004619 ORTHO05D005738 8.5e-09 64.3 61 59.0
arahy.Tifrunner.gnm1.ann1.RZ62YF Arachis hypogaea HOM05D004619 ORTHO05D083891 3.2e-08 62.4 29 96.6
SMO173G0047 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 4.7e-07 58.5 49 55.1
SMO146G0002 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 6.1e-07 58.2 49 55.1
SMO173G0051 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 6.1e-07 58.2 49 55.1
SMO173G0066 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 3.0e-06 55.8 49 51.0


User provided reference genes

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