Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4105RR Arachis hypogaea HOM05D003620 ORTHO05D004261 9.9e-87 323.6 180 100.0
arahy.Tifrunner.gnm1.ann1.XM8XEN Arachis hypogaea HOM05D003620 ORTHO05D004261 3.2e-85 318.5 182 98.9
Psat1g218440 Pisum sativum HOM05D003620 ORTHO05D004261 2.6e-50 202.6 154 70.1
Ca_00113_v3 Cicer arietinum L. HOM05D003620 ORTHO05D004261 9.7e-50 200.7 154 70.1
Medtr2g008190 Medicago truncatula HOM05D003620 ORTHO05D004261 9.7e-50 200.7 154 68.8
TPR.G19731 Trifolium pratense HOM05D003620 ORTHO05D004261 1.3e-49 200.3 158 69.0
Glyma.08G181200 Glycine max HOM05D003620 ORTHO05D004261 2.4e-48 196.1 154 68.2
Glyma.15G051100 Glycine max HOM05D003620 ORTHO05D004261 1.0e-46 190.7 154 66.2
Phvul.006G208800 Phaseolus vulgaris HOM05D003620 ORTHO05D004261 1.1e-45 187.2 154 66.2
VMungo0540G0770 Vigna mungo HOM05D003620 ORTHO05D004261 3.2e-45 185.7 154 66.2
Lj6g0005534 Lotus japonicus HOM05D003620 ORTHO05D004261 3.0e-43 179.1 154 64.3
TWI14G0354 Tripterygium wilfordii HOM05D003620 ORTHO05D004261 1.5e-42 176.8 158 59.5
Sed0005951 Sechium edule HOM05D003620 ORTHO05D004261 1.3e-41 173.7 169 55.6
Cfa005564 Carpinus fangiana HOM05D003620 ORTHO05D004261 3.7e-41 172.2 153 58.8
PSO541G1613 Papaver somniferum HOM05D003620 ORTHO05D004261 8.2e-41 171.0 164 57.3
Prupe.1G560600 Prunus persica HOM05D003620 ORTHO05D004261 1.8e-40 169.9 155 65.8
Atru.chr6.881 Acer truncatum HOM05D003620 ORTHO05D004261 2.4e-40 169.5 154 55.8
Cc02_g21930 Coffea canephora HOM05D003620 ORTHO05D004261 3.1e-40 169.1 161 55.3
MD08G1222700 Malus domestica HOM05D003620 ORTHO05D004261 3.1e-40 169.1 159 59.1
Manes.10G117200 Manihot esculenta HOM05D003620 ORTHO05D004261 1.6e-39 166.8 160 54.4
PSO675G2802 Papaver somniferum HOM05D003620 ORTHO05D004261 2.0e-39 166.4 164 56.7
THA.LOC104811774 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 2.7e-39 166.0 99 75.8
Duzib132G0147 Durio zibethinus HOM05D003620 ORTHO05D004261 7.7e-39 164.5 158 54.4
Potri.003G061700 Populus trichocarpa HOM05D003620 ORTHO05D004261 7.7e-39 164.5 163 54.6
THA.LOC104817775 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 7.7e-39 164.5 148 56.1
CsaV3_7G006180 Cucumis sativus L. HOM05D003620 ORTHO05D004261 1.0e-38 164.1 160 54.4
Gohir.D12G014500 Gossypium hirsutum HOM05D003620 ORTHO05D004261 1.0e-38 164.1 157 56.7
Gorai.008G014600 Gossypium raimondii HOM05D003620 ORTHO05D004261 1.0e-38 164.1 157 56.7
MELO3C018674.2 Cucumis melo HOM05D003620 ORTHO05D004261 1.7e-38 163.3 161 53.4
Nitab4.5_0007987g0020 Nicotiana tabacum HOM05D003620 ORTHO05D004261 1.7e-38 163.3 159 54.1
Sc09g0004430 Simmondsia chinensis HOM05D003620 ORTHO05D004261 1.7e-38 163.3 161 55.9
CANSAT11G0919 Cannabis sativa HOM05D003620 ORTHO05D004261 2.2e-38 162.9 100 77.0
CANSAT11G1106 Cannabis sativa HOM05D003620 ORTHO05D004261 2.2e-38 162.9 100 77.0
AUR62004784 Chenopodium quinoa HOM05D003620 ORTHO05D004261 2.2e-38 162.9 162 53.1
Dinv24229 Davidia involucrata HOM05D003620 ORTHO05D004261 2.2e-38 162.9 98 75.5
Actinidia00242 Actinidia chinensis HOM05D003620 ORTHO05D004261 2.9e-38 162.5 162 55.6
CiPaw.05G039200 Carya illinoinensis HOM05D003620 ORTHO05D004261 2.9e-38 162.5 162 51.2
Nn1g06259 Nelumbo nucifera HOM05D003620 ORTHO05D004261 2.9e-38 162.5 158 57.6
Nitab4.5_0008610g0050 Nicotiana tabacum HOM05D003620 ORTHO05D004261 2.9e-38 162.5 160 53.8
TAR625G1066 Trochodendron aralioides HOM05D003620 ORTHO05D004261 5.0e-38 161.8 158 57.0
CAN.G523.97 Capsicum annuum HOM05D003620 ORTHO05D004261 6.5e-38 161.4 155 54.8
Thhalv10024661m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 6.5e-38 161.4 155 54.8
FvH4_5g30530 Fragaria vesca HOM05D003620 ORTHO05D004261 6.5e-38 161.4 103 71.8
FAN13G1243 Fragaria x ananassa HOM05D003620 ORTHO05D004261 6.5e-38 161.4 103 71.8
FAN18G1779 Fragaria x ananassa HOM05D003620 ORTHO05D004261 6.5e-38 161.4 103 71.8
Gohir.A12G013866 Gossypium hirsutum HOM05D003620 ORTHO05D004261 6.5e-38 161.4 157 56.7
Aa31LG3G330 Aethionema arabicum HOM05D003620 ORTHO05D004261 1.1e-37 160.6 154 51.9
ECA236G2397 Erigeron canadensis HOM05D003620 ORTHO05D004261 1.1e-37 160.6 162 51.2
FAN08G3618 Fragaria x ananassa HOM05D003620 ORTHO05D004261 1.5e-37 160.2 103 70.9
Lalb_Chr18g0060681 Lupinus albus HOM05D003620 ORTHO05D004261 1.5e-37 160.2 95 81.1
Manes.07G024800 Manihot esculenta HOM05D003620 ORTHO05D004261 1.9e-37 159.8 99 71.7
CSS0011415 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 2.5e-37 159.5 162 55.6
FAN04G1518 Fragaria x ananassa HOM05D003620 ORTHO05D004261 2.5e-37 159.5 103 70.9
CARHR233480 Cardamine hirsuta HOM05D003620 ORTHO05D004261 3.2e-37 159.1 147 53.1
Oeu047370.1 Olea europaea HOM05D003620 ORTHO05D004261 3.2e-37 159.1 160 52.5
QL02p098754 Quercus lobata HOM05D003620 ORTHO05D004261 3.2e-37 159.1 166 54.2
CSS0027167 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 4.2e-37 158.7 123 62.6
Potri.001G172400 Populus trichocarpa HOM05D003620 ORTHO05D004261 4.2e-37 158.7 156 57.1
Sabra01G0139300 Salix brachista HOM05D003620 ORTHO05D004261 5.5e-37 158.3 156 57.1
A01p17230 Brassica napus HOM05D003620 ORTHO05D004261 7.2e-37 157.9 154 53.9
PGR042G1212 Punica granatum HOM05D003620 ORTHO05D004261 7.2e-37 157.9 155 53.5
Sp7g23980 Schrenkiella parvula HOM05D003620 ORTHO05D004261 7.2e-37 157.9 148 53.4
CARHR270980 Cardamine hirsuta HOM05D003620 ORTHO05D004261 9.4e-37 157.5 154 51.9
BcaC09g50725 Brassica carinata HOM05D003620 ORTHO05D004261 1.2e-36 157.1 154 52.6
C01p21590 Brassica napus HOM05D003620 ORTHO05D004261 1.2e-36 157.1 154 52.6
BolC1t02078H Brassica oleracea HOM05D003620 ORTHO05D004261 1.2e-36 157.1 154 52.6
Carub.0007s1498 Capsella rubella HOM05D003620 ORTHO05D004261 1.2e-36 157.1 154 54.5
Migut.B00642 Erythranthe guttata HOM05D003620 ORTHO05D004261 1.2e-36 157.1 156 53.2
AL7G27030 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 1.6e-36 156.8 154 53.9
MSTRG.16561 Avicennia marina HOM05D003620 ORTHO05D004261 2.1e-36 156.4 160 52.5
BraA01t01679Z Brassica rapa HOM05D003620 ORTHO05D004261 2.7e-36 156.0 154 51.9
RcHm_v2.0_Chr7g0225351 Rosa chinensis HOM05D003620 ORTHO05D004261 3.6e-36 155.6 103 68.9
Solyc01g104880.3 Solanum lycopersicum HOM05D003620 ORTHO05D004261 4.7e-36 155.2 157 52.2
Thecc.02G144000 Theobroma cacao HOM05D003620 ORTHO05D004261 4.7e-36 155.2 159 52.8
AT4G25970 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 6.1e-36 154.8 154 52.6
Sopen01g047400 Solanum pennellii HOM05D003620 ORTHO05D004261 6.1e-36 154.8 157 52.2
Actinidia38967 Actinidia chinensis HOM05D003620 ORTHO05D004261 8.0e-36 154.5 158 59.5
Carub.0008s1770 Capsella rubella HOM05D003620 ORTHO05D004261 1.0e-35 154.1 154 50.6
BcaNung03773 Brassica carinata HOM05D003620 ORTHO05D004261 1.8e-35 153.3 154 50.6
Sp6g18920 Schrenkiella parvula HOM05D003620 ORTHO05D004261 1.8e-35 153.3 154 50.0
Oeu037206.2 Olea europaea HOM05D003620 ORTHO05D004261 2.3e-35 152.9 161 57.1
ATR1136G049 Amborella trichopoda HOM05D003620 ORTHO05D004261 3.0e-35 152.5 96 70.8
Thhalv10012950m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 4.0e-35 152.1 98 67.3
BcaB08g36077 Brassica carinata HOM05D003620 ORTHO05D004261 5.2e-35 151.8 156 50.0
Lsat_1_v5_gn_7_80501 Lactuca sativa HOM05D003620 ORTHO05D004261 5.2e-35 151.8 165 51.5
EL10Ac4g08941 Beta vulgaris HOM05D003620 ORTHO05D004261 8.8e-35 151.0 154 53.9
A10p14580 Brassica napus HOM05D003620 ORTHO05D004261 8.8e-35 151.0 156 50.0
Eucgr.G00656 Eucalyptus grandis HOM05D003620 ORTHO05D004261 2.0e-34 149.8 134 55.2
Aqoxy6G00354 Aquilegia oxysepala HOM05D003620 ORTHO05D004261 2.6e-34 149.4 150 54.7
BcaC04g19991 Brassica carinata HOM05D003620 ORTHO05D004261 2.6e-34 149.4 156 49.4
C09p49020 Brassica napus HOM05D003620 ORTHO05D004261 2.6e-34 149.4 156 49.4
BolC9t57753H Brassica oleracea HOM05D003620 ORTHO05D004261 2.6e-34 149.4 156 49.4
BraA10t43545Z Brassica rapa HOM05D003620 ORTHO05D004261 2.6e-34 149.4 156 49.4
AL161U10010 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 3.4e-34 149.1 154 48.7
AT5G57190 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 4.4e-34 148.7 154 48.1
SalBow5G2235 Salvia bowleyana HOM05D003620 ORTHO05D004261 1.7e-33 146.7 167 51.5
HanXRQChr11g0337651 Helianthus annuus HOM05D003620 ORTHO05D004261 2.2e-33 146.4 162 51.2
Lsat_1_v5_gn_9_117920 Lactuca sativa HOM05D003620 ORTHO05D004261 2.2e-33 146.4 105 64.8
ClCG09G013430 Citrullus lanatus HOM05D003620 ORTHO05D004261 6.3e-33 144.8 154 51.3
Zm00001eb362570 Zea mays HOM05D003620 ORTHO05D004261 8.3e-33 144.4 157 49.0
HanXRQChr03g0065791 Helianthus annuus HOM05D003620 ORTHO05D004261 1.4e-32 143.7 96 65.6
MBI06_g29671_MAGBIO Magnolia biondii HOM05D003620 ORTHO05D004261 9.1e-32 141.0 146 49.3
Ciclev10000710m.g Citrus clementina HOM05D003620 ORTHO05D004261 1.2e-31 140.6 198 48.0
Lj5C243G7 Lonicera japonica HOM05D003620 ORTHO05D004261 2.7e-31 139.4 111 60.4
HPP92_019398 Vanilla planifolia HOM05D003620 ORTHO05D004261 1.3e-30 137.1 97 62.9
Peaxi162Scf00001g00523 Petunia axillaris HOM05D003620 ORTHO05D004261 1.1e-29 134.0 158 49.4
Peaxi162Scf00152g01227 Petunia axillaris HOM05D003620 ORTHO05D004261 1.1e-29 134.0 78 75.6
CDE08G1148 Ceratophyllum demersum HOM05D003620 ORTHO05D004261 1.9e-29 133.3 159 44.7
Mapoly0064s0044 Marchantia polymorpha HOM05D003620 ORTHO05D004261 3.2e-29 132.5 99 59.6
SGA_v2.0_scaffold83G26271 Striga asiatica HOM05D003620 ORTHO05D004261 1.2e-28 130.6 160 48.8
Rhsim11G0134200 Rhododendron simsii HOM05D003620 ORTHO05D004261 2.8e-28 129.4 164 48.2
GSVIVG01029735001 Vitis vinifera HOM05D003620 ORTHO05D004261 1.0e-27 127.5 133 51.9
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 1.4e-27 127.1 143 44.8
Gohir.A12G013800 Gossypium hirsutum HOM05D003620 ORTHO05D004261 2.3e-27 126.3 76 73.7
DCAR_001444 Daucus carota HOM05D003620 ORTHO05D004261 3.0e-27 125.9 202 39.1
Pp3c15_7420 Physcomitrium patens HOM05D003620 ORTHO05D004261 5.2e-27 125.2 93 59.1
AagrBONN_evm.TU.Sc2ySwM_228.3970 Anthoceros agrestis HOM05D003620 ORTHO05D004261 8.8e-27 124.4 94 55.3
COL.COLO4_20874 Corchorus olitorius HOM05D003620 ORTHO05D004261 8.6e-22 107.8 159 42.1
AL8G33150 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 1.5e-21 107.1 159 38.4
Haze_10767 Corylus avellana HOM05D003620 ORTHO05D004261 2.2e-17 93.2 103 52.4
CBR_g4360 Chara braunii HOM05D003620 ORTHO05D004261 2.9e-17 92.8 88 46.6
Haze_10763 Corylus avellana HOM05D003620 ORTHO05D004261 3.2e-16 89.4 103 50.5
QL08p057600 Quercus lobata HOM05D003620 ORTHO05D004261 3.9e-14 82.4 119 46.2
Sabra03G0035800 Salix brachista HOM05D003620 ORTHO05D004261 1.6e-12 77.0 43 81.4
SMO244G0007 Selaginella moellendorffii HOM05D003620 ORTHO05D004261 1.6e-12 77.0 86 46.5
Medtr7g104390 Medicago truncatula HOM05D003620 ORTHO05D004261 3.6e-12 75.9 51 72.5
HanXRQChr04g0126841 Helianthus annuus HOM05D003620 ORTHO05D004261 1.5e-10 70.5 47 59.6
Medtr5g009630 Medicago truncatula HOM05D004543 ORTHO05D004261 9.8e-10 67.8 46 69.6
Cpa.g.sc2.53 Carica papaya HOM05D003620 ORTHO05D004261 1.9e-08 63.5 104 37.5
SEGI_17560 Sequoiadendron giganteum HOM05D003620 ORTHO05D004261 2.7e-07 59.7 83 42.2


User provided reference genes

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