Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0TG4XQ Arachis hypogaea HOM05D008504 ORTHO05D010707 0.0e+00 1211.4 585 100.0
arahy.Tifrunner.gnm1.ann1.2I4AA8 Arachis hypogaea HOM05D008504 ORTHO05D010707 0.0e+00 1211.4 585 100.0
arahy.Tifrunner.gnm1.ann1.5RQB9J Arachis hypogaea HOM05D008504 ORTHO05D010707 0.0e+00 1177.5 583 97.4
arahy.Tifrunner.gnm1.ann1.PE8RGD Arachis hypogaea HOM05D008504 ORTHO05D010707 0.0e+00 1177.5 583 97.4
arahy.Tifrunner.gnm1.ann1.HCH4H8 Arachis hypogaea HOM05D008504 ORTHO05D010707 6.5e-220 767.7 596 66.6
arahy.Tifrunner.gnm1.ann1.XH95LH Arachis hypogaea HOM05D008504 ORTHO05D010707 6.5e-220 767.7 596 66.6
arahy.Tifrunner.gnm1.ann1.0HX70L Arachis hypogaea HOM05D008504 ORTHO05D010707 4.4e-152 542.3 436 67.7
arahy.Tifrunner.gnm1.ann1.2C1SEX Arachis hypogaea HOM05D008504 ORTHO05D010707 4.4e-152 542.3 436 67.7
arahy.Tifrunner.gnm1.ann1.3X8B6N Arachis hypogaea HOM05D008504 ORTHO05D010707 2.1e-130 470.3 592 46.3
arahy.Tifrunner.gnm1.ann1.QMM8JA Arachis hypogaea HOM05D008504 ORTHO05D010707 3.6e-130 469.5 588 46.1
arahy.Tifrunner.gnm1.ann1.A1ZBG7 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.4e-129 466.8 591 45.9
arahy.Tifrunner.gnm1.ann1.QZ4EVV Arachis hypogaea HOM05D008504 ORTHO05D010707 3.1e-129 466.5 591 45.9
arahy.Tifrunner.gnm1.ann1.HMY8CZ Arachis hypogaea HOM05D008504 ORTHO05D010707 3.4e-128 463.0 601 45.6
arahy.Tifrunner.gnm1.ann1.WCXU76 Arachis hypogaea HOM05D008504 ORTHO05D010707 7.6e-128 461.8 594 46.3
arahy.Tifrunner.gnm1.ann1.DKU1F8 Arachis hypogaea HOM05D008504 ORTHO05D010707 3.8e-127 459.5 593 46.0
arahy.Tifrunner.gnm1.ann1.D90TM1 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.8e-124 450.7 591 46.5
arahy.Tifrunner.gnm1.ann1.PBP9SE Arachis hypogaea HOM05D008504 ORTHO05D010707 2.1e-122 443.7 604 45.0
arahy.Tifrunner.gnm1.ann1.FHH1YD Arachis hypogaea HOM05D008504 ORTHO05D010707 3.7e-122 443.0 607 43.7
arahy.Tifrunner.gnm1.ann1.B27QWS Arachis hypogaea HOM05D008504 ORTHO05D010707 6.2e-122 442.2 588 44.4
arahy.Tifrunner.gnm1.ann1.UJY401 Arachis hypogaea HOM05D008504 ORTHO05D010707 8.1e-122 441.8 604 45.0
arahy.Tifrunner.gnm1.ann1.F5F6FM Arachis hypogaea HOM05D008504 ORTHO05D010707 2.0e-120 437.2 587 44.0
arahy.Tifrunner.gnm1.ann1.NP4SZW Arachis hypogaea HOM05D008504 ORTHO05D010707 6.4e-119 432.2 588 44.0
arahy.Tifrunner.gnm1.ann1.J252LG Arachis hypogaea HOM05D008504 ORTHO05D010707 2.5e-118 430.3 567 44.3
arahy.Tifrunner.gnm1.ann1.0E19IK Arachis hypogaea HOM05D008504 ORTHO05D010707 4.2e-118 429.5 570 44.9
arahy.Tifrunner.gnm1.ann1.00W0BQ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.1e-117 427.2 579 43.9
arahy.Tifrunner.gnm1.ann1.MCNZ84 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.1e-117 427.2 579 43.9
arahy.Tifrunner.gnm1.ann1.2PI4SD Arachis hypogaea HOM05D008504 ORTHO05D010707 2.7e-117 426.8 590 45.1
arahy.Tifrunner.gnm1.ann1.3HSW25 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.7e-117 426.8 590 45.1
arahy.Tifrunner.gnm1.ann1.ERGP6F Arachis hypogaea HOM05D008504 ORTHO05D010707 2.7e-117 426.8 601 44.3
arahy.Tifrunner.gnm1.ann1.CY9GMY Arachis hypogaea HOM05D008504 ORTHO05D010707 7.9e-117 425.2 604 43.5
arahy.Tifrunner.gnm1.ann1.EY8LTQ Arachis hypogaea HOM05D008504 ORTHO05D010707 3.0e-116 423.3 511 47.9
arahy.Tifrunner.gnm1.ann1.W613FT Arachis hypogaea HOM05D008504 ORTHO05D010707 6.7e-116 422.2 511 48.1
arahy.Tifrunner.gnm1.ann1.W9IIXQ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.0e-112 410.6 599 42.2
arahy.Tifrunner.gnm1.ann1.DST42P Arachis hypogaea HOM05D008504 ORTHO05D010707 1.1e-107 394.8 512 44.5
arahy.Tifrunner.gnm1.ann1.5E9NVZ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.9e-102 377.5 595 41.5
arahy.Tifrunner.gnm1.ann1.BZE4S9 Arachis hypogaea HOM05D008504 ORTHO05D010707 8.2e-98 362.1 576 39.8
arahy.Tifrunner.gnm1.ann1.XQPR1E Arachis hypogaea HOM05D008504 ORTHO05D010707 7.7e-88 328.9 445 44.5
arahy.Tifrunner.gnm1.ann1.L2A829 Arachis hypogaea HOM05D008504 ORTHO05D010707 5.5e-86 322.8 455 41.5
arahy.Tifrunner.gnm1.ann1.RM5ZHJ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-67 261.9 405 42.2
arahy.Tifrunner.gnm1.ann1.W88FQP Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-67 261.9 405 42.2
arahy.Tifrunner.gnm1.ann1.3C5L0V Arachis hypogaea HOM05D008504 ORTHO05D010707 1.5e-62 245.0 354 43.5
arahy.Tifrunner.gnm1.ann1.978BNZ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.5e-62 245.0 354 43.5
arahy.Tifrunner.gnm1.ann1.Y4Q7MJ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.5e-46 191.0 258 43.0
arahy.Tifrunner.gnm1.ann1.5K2DU6 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.4e-44 185.3 237 46.4
arahy.Tifrunner.gnm1.ann1.E6ECRL Arachis hypogaea HOM05D008504 ORTHO05D010707 1.4e-44 185.3 219 47.0
arahy.Tifrunner.gnm1.ann1.U1D3X5 Arachis hypogaea HOM05D008504 ORTHO05D010707 5.2e-44 183.3 242 46.3
arahy.Tifrunner.gnm1.ann1.K73WW4 Arachis hypogaea HOM05D008504 ORTHO05D010707 4.6e-40 170.2 231 43.3
arahy.Tifrunner.gnm1.ann1.B18DRP Arachis hypogaea HOM05D005848 ORTHO05D007532 2.6e-27 127.9 237 40.5
arahy.Tifrunner.gnm1.ann1.U1EDB6 Arachis hypogaea HOM05D005848 ORTHO05D007532 2.6e-27 127.9 291 37.1
arahy.Tifrunner.gnm1.ann1.K656SJ Arachis hypogaea HOM05D005848 ORTHO05D007532 4.4e-27 127.1 291 37.1
arahy.Tifrunner.gnm1.ann1.R41T5G Arachis hypogaea HOM05D005848 ORTHO05D007532 4.4e-27 127.1 291 37.1
Actinidia15328 Actinidia chinensis HOM05D005848 ORTHO05D007532 1.1e-25 122.5 243 38.7
Migut.C00727 Erythranthe guttata HOM05D005848 ORTHO05D007532 5.6e-22 110.2 301 30.6
FvH4_2g39810 Fragaria vesca HOM05D005848 ORTHO05D007532 1.8e-20 105.1 281 33.5
FAN20G0176 Fragaria x ananassa HOM05D005848 ORTHO05D007532 2.4e-20 104.8 235 36.6
FAN20G3094 Fragaria x ananassa HOM05D005848 ORTHO05D007532 2.4e-20 104.8 235 36.6
Glyma.14G075000 Glycine max HOM05D005848 ORTHO05D007532 4.0e-20 104.0 195 38.5
MD08G1031900 Malus domestica HOM05D005848 ORTHO05D007532 4.0e-20 104.0 239 35.6
Glyma.17G250400 Glycine max HOM05D005848 ORTHO05D007532 6.9e-20 103.2 299 33.4
FAN15G3081 Fragaria x ananassa HOM05D005848 ORTHO05D007532 9.0e-20 102.8 280 32.9
FAN27G0156 Fragaria x ananassa HOM05D005848 ORTHO05D007532 9.0e-20 102.8 231 36.4
arahy.Tifrunner.gnm1.ann1.QHI3M9 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.6e-19 101.3 91 57.1
Prupe.1G379500 Prunus persica HOM05D005848 ORTHO05D007532 4.4e-19 100.5 289 32.2
QL02p008596 Quercus lobata HOM05D005848 ORTHO05D007532 9.9e-19 99.4 236 35.2
CiPaw.16G056600 Carya illinoinensis HOM05D005848 ORTHO05D007532 1.3e-18 99.0 223 34.1
PSO541G0294 Papaver somniferum HOM05D005848 ORTHO05D007532 1.3e-18 99.0 235 34.5
EL10Ac1g00774 Beta vulgaris HOM05D005848 ORTHO05D007532 2.9e-18 97.8 282 30.1
RcHm_v2.0_Chr6g0301031 Rosa chinensis HOM05D005848 ORTHO05D007532 3.8e-18 97.4 240 35.0
Sed0003570 Sechium edule HOM05D005848 ORTHO05D007532 3.8e-18 97.4 295 31.5
Ah.05g173260 Amaranthus hybridus HOM05D005848 ORTHO05D007532 4.9e-18 97.1 192 34.9
Gohir.A01G115800 Gossypium hirsutum HOM05D005848 ORTHO05D007532 4.9e-18 97.1 248 34.7
Lalb_Chr14g0369301 Lupinus albus HOM05D005848 ORTHO05D007532 4.9e-18 97.1 300 32.7
Manes.18G027000 Manihot esculenta HOM05D005848 ORTHO05D007532 4.9e-18 97.1 235 33.2
MSTRG.1277 Avicennia marina HOM05D005848 ORTHO05D007532 6.4e-18 96.7 207 34.8
Gohir.D01G104100 Gossypium hirsutum HOM05D005848 ORTHO05D007532 6.4e-18 96.7 248 34.3
Gorai.002G128000 Gossypium raimondii HOM05D005848 ORTHO05D007532 6.4e-18 96.7 248 34.3
SalBow7G2715 Salvia bowleyana HOM05D005848 ORTHO05D007532 6.4e-18 96.7 297 30.0
Sc02g0006150 Simmondsia chinensis HOM05D005848 ORTHO05D007532 6.4e-18 96.7 286 30.4
TAR381G1506 Trochodendron aralioides HOM05D005848 ORTHO05D007532 6.4e-18 96.7 288 31.6
CsaV3_2G028680 Cucumis sativus L. HOM05D005848 ORTHO05D007532 8.4e-18 96.3 215 34.9
Rhsim07G0239300 Rhododendron simsii HOM05D005848 ORTHO05D007532 8.4e-18 96.3 283 31.8
VMungo0647G1182 Vigna mungo HOM05D005848 ORTHO05D007532 8.4e-18 96.3 297 31.3
Thecc.08G026700 Theobroma cacao HOM05D005848 ORTHO05D007532 1.1e-17 95.9 241 33.2
AUR62023420 Chenopodium quinoa HOM05D005848 ORTHO05D007532 1.4e-17 95.5 189 34.4
MELO3C010940.2 Cucumis melo HOM05D005848 ORTHO05D007532 1.4e-17 95.5 215 34.4
PSO675G8513 Papaver somniferum HOM05D005848 ORTHO05D007532 1.4e-17 95.5 245 34.3
AL2G35110 Arabidopsis lyrata HOM05D005848 ORTHO05D007532 2.4e-17 94.7 224 32.1
Nn1g04993 Nelumbo nucifera HOM05D005848 ORTHO05D007532 2.4e-17 94.7 244 34.4
Cpa.g.sc36.76 Carica papaya HOM05D005848 ORTHO05D007532 3.2e-17 94.4 296 31.1
Cc10_g02880 Coffea canephora HOM05D005848 ORTHO05D007532 3.2e-17 94.4 216 33.3
MD15G1027800 Malus domestica HOM05D005848 ORTHO05D007532 3.2e-17 94.4 239 33.9
Nitab4.5_0005373g0030 Nicotiana tabacum HOM05D005848 ORTHO05D007532 3.2e-17 94.4 235 34.5
Hund17082 Selenicereus undatus HOM05D005848 ORTHO05D007532 3.2e-17 94.4 285 29.5
A07p40790 Brassica napus HOM05D005848 ORTHO05D007532 4.2e-17 94.0 246 32.5
BraA07t31621Z Brassica rapa HOM05D005848 ORTHO05D007532 4.2e-17 94.0 246 32.5
Haze_17969 Corylus avellana HOM05D005848 ORTHO05D007532 4.2e-17 94.0 245 33.9
HanXRQChr02g0042111 Helianthus annuus HOM05D005848 ORTHO05D007532 4.2e-17 94.0 219 33.8
Cfa018151 Carpinus fangiana HOM05D005848 ORTHO05D007532 5.4e-17 93.6 300 29.7
Psat6g008800 Pisum sativum HOM05D005848 ORTHO05D007532 5.4e-17 93.6 218 35.8
A07p28980 Brassica napus HOM05D005848 ORTHO05D007532 7.1e-17 93.2 248 33.1
CAN.G1226.12 Capsicum annuum HOM05D005848 ORTHO05D007532 7.1e-17 93.2 206 34.0
Duzib116G0609 Durio zibethinus HOM05D005848 ORTHO05D007532 7.1e-17 93.2 243 32.1
Dinv36081 Davidia involucrata HOM05D005848 ORTHO05D007532 9.3e-17 92.8 236 33.1
Eucgr.F01897 Eucalyptus grandis HOM05D005848 ORTHO05D007532 9.3e-17 92.8 244 33.6
Aqoxy6G01108 Aquilegia oxysepala HOM05D005848 ORTHO05D007532 1.2e-16 92.4 173 35.8
Lj5g0008078 Lotus japonicus HOM05D005848 ORTHO05D007532 1.2e-16 92.4 222 33.8
SGA_v2.0_scaffold54G19521 Striga asiatica HOM05D005848 ORTHO05D007532 1.2e-16 92.4 218 31.7
BraA07t30539Z Brassica rapa HOM05D005848 ORTHO05D007532 1.6e-16 92.0 248 32.7
unitig_37.g12994 Utricularia gibba HOM05D005848 ORTHO05D007532 1.6e-16 92.0 217 32.7
Ca_13375_v3 Cicer arietinum L. HOM05D005848 ORTHO05D007532 2.1e-16 91.7 219 34.2
ClCG08G015110 Citrullus lanatus HOM05D005848 ORTHO05D007532 2.1e-16 91.7 244 32.0
Oeu049954.1 Olea europaea HOM05D005848 ORTHO05D007532 2.1e-16 91.7 232 33.2
C06p49180 Brassica napus HOM05D005848 ORTHO05D007532 2.7e-16 91.3 246 31.3
BolC6t39951H Brassica oleracea HOM05D005848 ORTHO05D007532 3.5e-16 90.9 246 30.9
CANSAT35G0174 Cannabis sativa HOM05D005848 ORTHO05D007532 3.5e-16 90.9 210 34.3
AUR62013733 Chenopodium quinoa HOM05D005848 ORTHO05D007532 3.5e-16 90.9 284 28.9
Nitab4.5_0006280g0010 Nicotiana tabacum HOM05D005848 ORTHO05D007532 3.5e-16 90.9 252 32.5
Thhalv10018304m.g Eutrema salsugineum HOM05D005848 ORTHO05D007532 4.6e-16 90.5 194 33.5
Peaxi162Scf00417g01212 Petunia axillaris HOM05D005848 ORTHO05D007532 6.0e-16 90.1 206 33.5
AT1G75200 Arabidopsis thaliana HOM05D005848 ORTHO05D007532 7.8e-16 89.7 215 31.2
Phvul.001G014532 Phaseolus vulgaris HOM05D005848 ORTHO05D007532 7.8e-16 89.7 218 33.0
Sopen04g033930 Solanum pennellii HOM05D005848 ORTHO05D007532 7.8e-16 89.7 229 31.9
THA.LOC104809061 Tarenaya hassleriana HOM05D005848 ORTHO05D007532 1.0e-15 89.4 236 31.8
CARHR068530 Cardamine hirsuta HOM05D005848 ORTHO05D007532 1.3e-15 89.0 244 29.5
Medtr1g022235 Medicago truncatula HOM05D005848 ORTHO05D007532 1.3e-15 89.0 218 32.6
Lj4A40T46 Lonicera japonica HOM05D005848 ORTHO05D007532 2.3e-15 88.2 218 34.9
DCAR_020974 Daucus carota HOM05D005848 ORTHO05D007532 5.1e-15 87.0 197 32.0
Potri.002G260700 Populus trichocarpa HOM05D005848 ORTHO05D007532 5.1e-15 87.0 215 33.0
Sp5g30360 Schrenkiella parvula HOM05D005848 ORTHO05D007532 5.1e-15 87.0 244 30.7
Solyc04g080340.3 Solanum lycopersicum HOM05D005848 ORTHO05D007532 5.1e-15 87.0 229 31.4
TPR.G20173 Trifolium pratense HOM05D005848 ORTHO05D007532 5.1e-15 87.0 223 31.8
COL.COLO4_26317 Corchorus olitorius HOM05D005848 ORTHO05D007532 6.6e-15 86.7 184 35.9
PGR031G0193 Punica granatum HOM05D005848 ORTHO05D007532 8.7e-15 86.3 211 34.6
TWI56G0568 Tripterygium wilfordii HOM05D005848 ORTHO05D007532 8.7e-15 86.3 216 32.4
Carub.0002s2201 Capsella rubella HOM05D005848 ORTHO05D007532 1.1e-14 85.9 215 29.8
TWI36G0400 Tripterygium wilfordii HOM05D005848 ORTHO05D007532 1.5e-14 85.5 243 30.9
PGSC0003DMG400004542 Solanum tuberosum HOM05D005848 ORTHO05D007532 1.9e-14 85.1 205 33.7
arahy.Tifrunner.gnm1.ann1.VUCP6Z Arachis hypogaea HOM05D008504 ORTHO05D010707 3.3e-14 84.3 86 48.8
Sabra02G0198400 Salix brachista HOM05D005848 ORTHO05D007532 7.3e-14 83.2 215 32.1
Aa31LG4G5410 Aethionema arabicum HOM05D005848 ORTHO05D007532 9.6e-14 82.8 244 29.5
vmacro04526 Vaccinium macrocarpon HOM05D005848 ORTHO05D007532 9.6e-14 82.8 282 30.5
CDE01G0181 Ceratophyllum demersum HOM05D005848 ORTHO05D007532 2.8e-13 81.3 247 30.0
Lsat_1_v5_gn_1_17721 Lactuca sativa HOM05D005848 ORTHO05D007532 2.8e-13 81.3 242 30.6
MBI16_g31221_MAGBIO Magnolia biondii HOM05D005848 ORTHO05D007532 3.6e-13 80.9 167 33.5
vmacro11198 Vaccinium macrocarpon HOM05D005848 ORTHO05D007532 3.6e-13 80.9 284 30.3
Mapoly0010s0191 Marchantia polymorpha HOM05D005848 ORTHO05D007532 6.2e-13 80.1 218 31.2
CiPaw.16G057000 Carya illinoinensis HOM05D005848 ORTHO05D007532 1.1e-12 79.3 199 33.2
Ciclev10003946m.g Citrus clementina HOM05D005848 ORTHO05D007532 2.0e-11 75.1 244 29.9
HPP92_012274 Vanilla planifolia HOM05D005848 ORTHO05D007532 7.6e-11 73.2 195 30.8
SMO119G0034 Selaginella moellendorffii HOM05D005848 ORTHO05D007532 3.8e-10 70.9 175 32.0
Pp3c8_14160 Physcomitrium patens HOM05D005848 ORTHO05D007532 8.4e-10 69.7 158 31.6
ECA247G2683 Erigeron canadensis HOM05D005848 ORTHO05D007532 1.1e-09 69.3 215 28.4
Sed0016731 Sechium edule HOM05D005848 ORTHO05D007532 1.4e-09 68.9 109 45.0
CSS0006033 Camellia sinensis var. sinensis HOM05D005848 ORTHO05D007532 1.9e-09 68.6 212 30.2
ATR0733G119 Amborella trichopoda HOM05D005848 ORTHO05D007532 6.7e-07 60.1 122 36.1


User provided reference genes

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