Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.16LSI5 Arachis hypogaea HOM05D003481 ORTHO05D004001 2.7e-141 505.4 262 100.0
arahy.Tifrunner.gnm1.ann1.0SF8RD Arachis hypogaea HOM05D003481 ORTHO05D004001 6.5e-71 271.6 300 58.7
arahy.Tifrunner.gnm1.ann1.D6X22R Arachis hypogaea HOM05D003481 ORTHO05D004001 5.5e-70 268.5 274 61.3
Ca_02512_v3 Cicer arietinum L. HOM05D003481 ORTHO05D004001 9.4e-62 241.1 275 57.5
TPR.G22668 Trifolium pratense HOM05D003481 ORTHO05D004001 6.1e-61 238.4 275 56.4
Psat0s4071g0040 Pisum sativum HOM05D003481 ORTHO05D004001 1.8e-60 236.9 275 55.6
Glyma.15G192300 Glycine max HOM05D003481 ORTHO05D004001 8.8e-60 234.6 292 53.8
Glyma.09G083800 Glycine max HOM05D003481 ORTHO05D004001 2.8e-58 229.6 292 52.7
Medtr2g047908 Medicago truncatula HOM05D003481 ORTHO05D004001 6.3e-58 228.4 275 55.3
Phvul.009G217900 Phaseolus vulgaris HOM05D003481 ORTHO05D004001 8.3e-58 228.0 292 52.1
Lalb_Chr08g0233181 Lupinus albus HOM05D003481 ORTHO05D004001 2.3e-55 219.9 281 52.0
Lj6g0004300 Lotus japonicus HOM05D003481 ORTHO05D004001 3.0e-52 209.5 286 50.3
MD04G1237800 Malus domestica HOM05D003481 ORTHO05D004001 2.9e-47 193.0 274 47.1
RcHm_v2.0_Chr3g0448451 Rosa chinensis HOM05D003481 ORTHO05D004001 4.3e-46 189.1 284 47.2
Cfa000748 Carpinus fangiana HOM05D003481 ORTHO05D004001 7.3e-46 188.3 289 45.7
GSVIVG01037972001 Vitis vinifera HOM05D003481 ORTHO05D004001 6.1e-45 185.3 268 47.4
Atru.chr8.321 Acer truncatum HOM05D003481 ORTHO05D004001 1.0e-44 184.5 296 46.3
Gohir.A10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 1.0e-44 184.5 278 48.2
FAN02G3168 Fragaria x ananassa HOM05D003481 ORTHO05D004001 2.3e-44 183.3 287 46.3
Lj1A1155G48 Lonicera japonica HOM05D003481 ORTHO05D004001 2.3e-44 183.3 268 47.4
MD12G1256000 Malus domestica HOM05D003481 ORTHO05D004001 2.3e-44 183.3 294 43.5
CsaV3_6G052920 Cucumis sativus L. HOM05D003481 ORTHO05D004001 6.8e-44 181.8 285 48.1
FvH4_6g01010 Fragaria vesca HOM05D003481 ORTHO05D004001 1.5e-43 180.6 294 44.6
QL05p065371 Quercus lobata HOM05D003481 ORTHO05D004001 2.0e-43 180.3 265 47.2
QL08p057617 Quercus lobata HOM05D003481 ORTHO05D004001 2.0e-43 180.3 265 47.2
CiPaw.09G149800 Carya illinoinensis HOM05D003481 ORTHO05D004001 2.6e-43 179.9 292 43.5
Gohir.D10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 3.4e-43 179.5 278 47.1
Gorai.011G004800 Gossypium raimondii HOM05D003481 ORTHO05D004001 3.4e-43 179.5 278 47.5
Prupe.6G356900 Prunus persica HOM05D003481 ORTHO05D004001 5.8e-43 178.7 293 43.3
ECA236G0663 Erigeron canadensis HOM05D003481 ORTHO05D004001 1.3e-42 177.6 260 45.8
THA.LOC104812894 Tarenaya hassleriana HOM05D003481 ORTHO05D004001 1.7e-42 177.2 289 44.6
Thecc.06G002800 Theobroma cacao HOM05D003481 ORTHO05D004001 1.7e-42 177.2 292 44.2
TAR624G0033 Trochodendron aralioides HOM05D003481 ORTHO05D004001 1.7e-42 177.2 290 45.2
Manes.03G069500 Manihot esculenta HOM05D003481 ORTHO05D004001 2.9e-42 176.4 288 44.4
Sed0003597 Sechium edule HOM05D003481 ORTHO05D004001 3.7e-42 176.0 292 45.2
Dinv03119 Davidia involucrata HOM05D003481 ORTHO05D004001 6.4e-42 175.3 295 43.7
PSO170G3331 Papaver somniferum HOM05D003481 ORTHO05D004001 8.3e-42 174.9 268 47.0
Sed0000926 Sechium edule HOM05D003481 ORTHO05D004001 8.3e-42 174.9 292 44.5
Hma1.2p1_0410F.1_g147020 Hydrangea macrophylla HOM05D003481 ORTHO05D004001 1.1e-41 174.5 270 43.7
Nn4g25046 Nelumbo nucifera HOM05D003481 ORTHO05D004001 1.1e-41 174.5 287 42.2
AUR62005919 Chenopodium quinoa HOM05D003481 ORTHO05D004001 1.9e-41 173.7 283 43.8
Sc13g0010770 Simmondsia chinensis HOM05D003481 ORTHO05D004001 1.9e-41 173.7 291 42.3
MELO3C007016.2 Cucumis melo HOM05D003481 ORTHO05D004001 2.4e-41 173.3 290 44.8
ClCG01G025690 Citrullus lanatus HOM05D003481 ORTHO05D004001 3.2e-41 172.9 293 44.7
TAR626G0933 Trochodendron aralioides HOM05D003481 ORTHO05D004001 3.2e-41 172.9 290 44.1
CAN.G954.8 Capsicum annuum HOM05D003481 ORTHO05D004001 4.1e-41 172.6 267 45.7
AUR62028144 Chenopodium quinoa HOM05D003481 ORTHO05D004001 4.1e-41 172.6 284 43.3
Peaxi162Scf00267g00817 Petunia axillaris HOM05D003481 ORTHO05D004001 9.2e-41 171.4 292 42.5
CSS0014471 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 1.2e-40 171.0 261 46.4
Ciclev10014122m.g Citrus clementina HOM05D003481 ORTHO05D004001 1.2e-40 171.0 293 44.0
Duzib235G1444 Durio zibethinus HOM05D003481 ORTHO05D004001 1.2e-40 171.0 285 42.8
Sopen02g018780 Solanum pennellii HOM05D003481 ORTHO05D004001 3.5e-40 169.5 266 44.4
PSO063G1971 Papaver somniferum HOM05D003481 ORTHO05D004001 1.3e-39 167.5 268 45.9
TWI15G0246 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 1.3e-39 167.5 288 42.0
Eucgr.K01948 Eucalyptus grandis HOM05D003481 ORTHO05D004001 5.0e-39 165.6 285 42.1
TWI38G1754 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 1.1e-38 164.5 290 41.7
Lsat_1_v5_gn_7_35621 Lactuca sativa HOM05D003481 ORTHO05D004001 1.5e-38 164.1 260 44.2
SGA_v2.0_scaffold341G49384 Striga asiatica HOM05D003481 ORTHO05D004001 2.5e-38 163.3 289 41.2
CARHR226290 Cardamine hirsuta HOM05D003481 ORTHO05D004001 3.3e-38 162.9 286 40.9
HanXRQChr06g0183401 Helianthus annuus HOM05D003481 ORTHO05D004001 3.3e-38 162.9 267 43.4
A01p11430 Brassica napus HOM05D003481 ORTHO05D004001 4.3e-38 162.5 278 43.5
BraA01t01089Z Brassica rapa HOM05D003481 ORTHO05D004001 4.3e-38 162.5 278 43.5
Nitab4.5_0010415g0040 Nicotiana tabacum HOM05D003481 ORTHO05D004001 5.6e-38 162.2 266 43.2
HanXRQChr04g0119881 Helianthus annuus HOM05D003481 ORTHO05D004001 7.3e-38 161.8 260 44.6
Nitab4.5_0002444g0030 Nicotiana tabacum HOM05D003481 ORTHO05D004001 7.3e-38 161.8 266 43.6
EL10Ac3g05104 Beta vulgaris HOM05D003481 ORTHO05D004001 1.2e-37 161.0 311 39.5
C07p50430 Brassica napus HOM05D003481 ORTHO05D004001 1.2e-37 161.0 277 40.4
BolC7t45545H Brassica oleracea HOM05D003481 ORTHO05D004001 1.2e-37 161.0 277 40.4
CAN.G306.7 Capsicum annuum HOM05D003481 ORTHO05D004001 1.2e-37 161.0 268 43.7
C01p13480 Brassica napus HOM05D003481 ORTHO05D004001 1.6e-37 160.6 286 41.3
BolC1t01321H Brassica oleracea HOM05D003481 ORTHO05D004001 1.6e-37 160.6 286 41.3
Actinidia02453 Actinidia chinensis HOM05D003481 ORTHO05D004001 2.1e-37 160.2 260 43.1
A03p51930 Brassica napus HOM05D003481 ORTHO05D004001 2.8e-37 159.8 277 40.1
vmacro03482 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 2.8e-37 159.8 280 42.5
AL7G34630 Arabidopsis lyrata HOM05D003481 ORTHO05D004001 3.6e-37 159.5 285 40.0
Potri.001G442900 Populus trichocarpa HOM05D003481 ORTHO05D004001 3.6e-37 159.5 292 42.8
Migut.H01305 Erythranthe guttata HOM05D003481 ORTHO05D004001 4.7e-37 159.1 290 39.7
COL.COLO4_26841 Corchorus olitorius HOM05D003481 ORTHO05D004001 6.2e-37 158.7 286 41.6
Nitab4.5_0000378g0100 Nicotiana tabacum HOM05D003481 ORTHO05D004001 6.2e-37 158.7 288 41.0
BcaNung01774 Brassica carinata HOM05D003481 ORTHO05D004001 8.0e-37 158.3 280 42.5
BraA03t14280Z Brassica rapa HOM05D003481 ORTHO05D004001 1.8e-36 157.1 275 40.4
HPP92_026238 Vanilla planifolia HOM05D003481 ORTHO05D004001 1.8e-36 157.1 300 40.0
BcaC09g51402 Brassica carinata HOM05D003481 ORTHO05D004001 2.3e-36 156.8 284 41.2
Potri.011G154000 Populus trichocarpa HOM05D003481 ORTHO05D004001 2.3e-36 156.8 291 42.6
DCAR_004311 Daucus carota HOM05D003481 ORTHO05D004001 3.1e-36 156.4 282 42.2
AT4G19490 Arabidopsis thaliana HOM05D003481 ORTHO05D004001 4.0e-36 156.0 286 40.9
Sopen02g009430 Solanum pennellii HOM05D003481 ORTHO05D004001 4.0e-36 156.0 268 43.7
Aa31LG6G2100 Aethionema arabicum HOM05D003481 ORTHO05D004001 5.2e-36 155.6 288 40.6
BcaNung02560 Brassica carinata HOM05D003481 ORTHO05D004001 8.9e-36 154.8 284 41.2
BcaNung07226 Brassica carinata HOM05D003481 ORTHO05D004001 1.5e-35 154.1 285 39.6
Thhalv10024300m.g Eutrema salsugineum HOM05D003481 ORTHO05D004001 1.5e-35 154.1 284 41.5
Solyc02g030110.2 Solanum lycopersicum HOM05D003481 ORTHO05D004001 1.5e-35 154.1 267 43.4
Sp7g18100 Schrenkiella parvula HOM05D003481 ORTHO05D004001 2.0e-35 153.7 285 41.1
Hund09767 Selenicereus undatus HOM05D003481 ORTHO05D004001 2.0e-35 153.7 282 40.4
Rhsim13G0126800 Rhododendron simsii HOM05D003481 ORTHO05D004001 2.6e-35 153.3 283 39.2
Sabra11G0145500 Salix brachista HOM05D003481 ORTHO05D004001 4.4e-35 152.5 294 41.2
CDE02G2268 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 9.8e-35 151.4 260 40.8
Zm00001eb419780 Zea mays HOM05D003481 ORTHO05D004001 9.8e-35 151.4 266 41.7
SalBow7G3129 Salvia bowleyana HOM05D003481 ORTHO05D004001 1.1e-33 147.9 308 39.0
CDE09G0686 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 1.9e-33 147.1 260 40.0
FAN09G1882 Fragaria x ananassa HOM05D003481 ORTHO05D004001 2.4e-33 146.7 287 41.8
Oeu008973.2 Olea europaea HOM05D003481 ORTHO05D004001 2.4e-33 146.7 324 36.7
Carub.0007s2172 Capsella rubella HOM05D003481 ORTHO05D004001 3.2e-33 146.4 288 39.9
Aqoxy7G02779 Aquilegia oxysepala HOM05D003481 ORTHO05D004001 4.1e-33 146.0 292 38.7
FAN14G4292 Fragaria x ananassa HOM05D003481 ORTHO05D004001 5.4e-33 145.6 287 41.5
Zm00001eb088370 Zea mays HOM05D003481 ORTHO05D004001 5.4e-33 145.6 266 41.0
FAN05G1738 Fragaria x ananassa HOM05D003481 ORTHO05D004001 1.2e-32 144.4 287 41.5
Sabra16G0301200 Salix brachista HOM05D003481 ORTHO05D004001 2.1e-32 143.7 290 40.7
DCAR_001341 Daucus carota HOM05D003481 ORTHO05D004001 1.1e-30 137.9 306 37.6
Duzib160G0577 Durio zibethinus HOM05D003481 ORTHO05D004001 2.5e-30 136.7 192 47.9
ATR1132G011 Amborella trichopoda HOM05D003481 ORTHO05D004001 3.3e-30 136.3 291 37.5
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 1.2e-29 134.4 297 38.0
Cc09_g07300 Coffea canephora HOM05D003481 ORTHO05D004001 2.8e-29 133.3 277 36.8
SMO137G0352 Selaginella moellendorffii HOM05D003481 ORTHO05D004001 6.2e-29 132.1 262 38.9
Haze_05982 Corylus avellana HOM05D003481 ORTHO05D004001 2.3e-28 130.2 215 42.8
Sabra16G0299600 Salix brachista HOM05D003481 ORTHO05D004001 7.1e-25 118.6 217 43.8
Ah.13g071230 Amaranthus hybridus HOM05D003481 ORTHO05D004001 1.0e-23 114.8 202 44.1
AagrBONN_evm.TU.Sc2ySwM_228.4333 Anthoceros agrestis HOM05D003481 ORTHO05D004001 1.7e-23 114.0 297 34.0
RcHm_v2.0_Chr7g0240301 Rosa chinensis HOM05D003481 ORTHO05D004001 2.8e-21 106.7 304 34.2
Mapoly0095s0011 Marchantia polymorpha HOM05D003481 ORTHO05D004001 1.1e-20 104.8 359 29.0
Pp3c11_18680 Physcomitrium patens HOM05D003481 ORTHO05D004001 2.4e-20 103.6 310 31.9
Actinidia29308 Actinidia chinensis HOM05D003481 ORTHO05D004001 2.0e-19 100.5 102 59.8
SEGI_21626 Sequoiadendron giganteum HOM05D003481 ORTHO05D004001 1.9e-14 84.0 94 52.1
AagrBONN_evm.TU.Sc2ySwM_117.2303 Anthoceros agrestis HOM05D003481 ORTHO05D004001 4.3e-14 82.8 223 32.7
Lsat_1_v5_gn_0_25080 Lactuca sativa HOM05D003481 ORTHO05D004001 7.3e-14 82.0 142 42.3
CSS0048234 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 2.1e-13 80.5 49 75.5
CBR_g45268 Chara braunii HOM05D003481 ORTHO05D004001 6.2e-13 79.0 197 34.0
SEGI_29135 Sequoiadendron giganteum HOM05D003481 ORTHO05D004001 3.1e-12 76.6 155 36.8
SHI31587 Sapria himalayana HOM05D003481 ORTHO05D004001 2.9e-10 70.1 40 77.5
SHI31589 Sapria himalayana HOM05D003481 ORTHO05D004001 5.4e-09 65.9 116 39.7
SHI31588 Sapria himalayana HOM05D003481 ORTHO05D004001 1.6e-08 64.3 79 54.4
Lsat_1_v5_gn_0_13620 Lactuca sativa HOM05D002610 ORTHO05D002926 3.9e-07 59.7 64 53.1
MBI19_g43313_MAGBIO Magnolia biondii HOM05D003481 ORTHO05D004001 1.5e-06 57.8 160 31.2
Oeu001605.1 Olea europaea HOM05D003481 ORTHO05D004001 7.3e-06 55.5 110 33.6


User provided reference genes

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