Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 0.0e+00 1679.8 1023 100.0
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 0.0e+00 1191.8 1035 73.1
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 5.4e-230 802.0 1059 54.4
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 7.1e-230 801.6 1049 53.0
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 9.2e-230 801.2 1045 52.0
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 2.1e-229 800.0 1056 52.2
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 4.6e-229 798.9 1035 52.6
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.0e-228 797.7 1076 51.8
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 5.1e-228 795.4 1056 51.5
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 5.1e-228 795.4 1054 54.9
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.3e-227 792.7 1076 54.0
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 5.6e-227 792.0 1050 52.6
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 2.8e-226 789.6 1037 51.4
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.6e-226 789.3 1082 53.9
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 6.2e-226 788.5 1081 54.5
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.8e-225 786.9 1039 52.2
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 1.8e-225 786.9 1052 52.5
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.5e-224 783.9 1085 51.0
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 1.5e-224 783.9 1036 51.3
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.0e-224 783.5 1066 55.3
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 5.8e-224 781.9 1059 52.3
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 1.7e-223 780.4 1048 52.9
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 2.2e-223 780.0 1030 52.4
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 4.9e-223 778.9 1030 52.4
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 8.4e-223 778.1 1034 52.4
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 8.4e-223 778.1 1050 51.5
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 4.2e-222 775.8 1086 52.0
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 1.2e-221 774.2 747 64.4
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 6.0e-221 771.9 1050 51.5
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 6.0e-221 771.9 1054 53.2
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 7.8e-221 771.5 1037 53.8
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 1.3e-220 770.8 1049 51.5
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 1.7e-220 770.4 1043 50.4
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 1.7e-220 770.4 1034 54.7
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 5.1e-220 768.8 1037 51.5
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 5.1e-220 768.8 1038 51.3
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 5.1e-220 768.8 1055 51.3
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 6.6e-220 768.5 1035 51.4
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 6.6e-220 768.5 1039 50.9
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 8.7e-220 768.1 1032 51.9
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 1.1e-219 767.7 1051 50.8
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 9.6e-219 764.6 1040 51.2
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 9.6e-219 764.6 1050 51.1
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 8.1e-218 761.5 1044 51.2
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 1.4e-217 760.8 1038 54.9
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.4e-217 760.0 1031 53.6
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 6.9e-217 758.4 1065 51.9
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 9.0e-217 758.1 1033 50.5
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.5e-216 757.3 1059 53.0
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 2.6e-216 756.5 1039 50.9
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 4.5e-216 755.7 1045 50.0
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 7.6e-216 755.0 1071 49.8
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 1.7e-215 753.8 1029 50.7
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 3.8e-215 752.7 1031 49.6
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 4.9e-215 752.3 1037 50.7
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 2.4e-214 750.0 1054 49.8
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.2e-214 749.2 1034 52.6
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 4.2e-214 749.2 1032 54.3
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 7.1e-214 748.4 1054 49.7
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 7.1e-214 748.4 1048 51.9
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 1.6e-213 747.3 1154 50.1
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.6e-213 747.3 1036 50.6
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 2.1e-213 746.9 1029 51.5
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 2.7e-213 746.5 1042 50.0
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.7e-213 746.5 1024 53.5
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 3.5e-213 746.1 1050 49.0
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.0e-212 744.6 1038 51.0
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 2.3e-212 743.4 1038 53.7
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 2.3e-212 743.4 1050 50.0
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 3.9e-212 742.7 1034 50.8
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 3.9e-212 742.7 1058 50.0
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.5e-211 740.7 1023 50.3
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 4.3e-211 739.2 1044 52.5
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.6e-211 738.8 1055 50.1
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 5.6e-211 738.8 1032 50.2
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 1.3e-210 737.6 1083 49.9
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.6e-210 737.3 1055 49.6
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 8.1e-210 734.9 1042 55.9
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 2.6e-208 729.9 1038 50.5
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 3.4e-208 729.6 1041 50.4
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 1.3e-207 727.6 1065 49.4
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.7e-207 727.2 1052 48.4
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 1.7e-207 727.2 1069 48.3
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 2.4e-206 723.4 1169 49.4
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 2.4e-206 723.4 1040 50.0
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 3.2e-206 723.0 1109 48.2
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 7.1e-206 721.8 723 63.2
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 2.1e-205 720.3 1086 48.2
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 2.7e-205 719.9 1047 50.4
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.5e-205 719.5 1060 47.7
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 4.6e-205 719.2 1048 49.0
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 4.6e-205 719.2 1066 49.4
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 6.0e-205 718.8 1061 49.1
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 5.1e-204 715.7 1036 49.6
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 1.9e-203 713.8 1040 49.3
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 7.4e-203 711.8 1041 49.0
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 9.6e-203 711.4 1048 48.5
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 4.8e-202 709.1 1045 50.9
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 4.8e-202 709.1 1038 48.7
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 6.2e-202 708.8 1047 50.2
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 6.9e-201 705.3 1062 47.6
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 2.2e-199 700.3 1055 48.2
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 2.2e-199 700.3 1056 50.5
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 6.5e-199 698.7 1213 44.4
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.1e-198 698.0 1042 47.7
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 7.1e-198 695.3 1047 46.9
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 7.1e-198 695.3 1036 48.2
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 3.5e-197 693.0 1057 47.7
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 3.5e-197 693.0 1074 46.9
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 2.5e-195 686.8 1050 47.6
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 5.7e-195 685.6 1024 48.0
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 8.2e-194 681.8 1056 47.8
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 3.2e-190 669.8 1044 46.7
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 7.9e-181 638.6 1027 46.2
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 1.4e-180 637.9 1053 47.5
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 1.7e-178 630.9 1044 45.8
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 1.3e-175 621.3 391 92.1
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 4.5e-168 596.3 1037 44.2
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 8.0e-165 585.5 1057 41.5
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 1.2e-163 581.6 487 78.0
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 1.5e-163 581.3 820 48.5
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 1.8e-161 574.3 1071 43.7
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 5.3e-161 572.8 1141 40.7
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 4.4e-155 553.1 542 63.5
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 1.1e-150 538.5 616 56.0
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.5e-150 537.3 838 48.7
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 3.4e-147 526.9 951 45.7
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 8.3e-146 522.3 479 66.6
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 1.8e-137 494.6 807 45.8
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 1.9e-102 378.3 1064 33.3
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 4.2e-65 254.2 465 41.5
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 1.0e-50 206.5 575 35.3
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 9.4e-49 199.9 324 43.5
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.2e-48 199.5 315 49.5
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 2.2e-45 188.7 336 45.5
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 5.3e-44 184.1 137 78.1
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 5.9e-43 180.6 194 56.2
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 4.7e-40 171.0 156 62.8
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 8.0e-40 170.2 798 27.6
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 3.1e-36 158.3 351 38.2
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 6.8e-31 140.6 146 61.6
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 1.5e-30 139.4 90 84.4
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 1.3e-29 136.3 698 27.5
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 2.2e-29 135.6 105 71.4
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 1.2e-27 129.8 601 30.0
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 2.0e-27 129.0 88 75.0
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 4.5e-27 127.9 643 27.1
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 6.6e-26 124.0 508 29.9
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 9.5e-25 120.2 106 65.1
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.1e-23 115.2 349 31.5
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 4.0e-23 114.8 83 71.1
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.4e-22 111.3 242 40.9
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.1e-20 106.7 111 60.4
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 3.2e-20 105.1 91 65.9
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 5.4e-20 104.4 498 30.5
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 2.7e-19 102.1 138 48.6
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 7.8e-19 100.5 99 59.6
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 8.6e-18 97.1 84 66.7
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.1e-17 96.7 243 37.0
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 1.9e-17 95.9 63 82.5
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 3.3e-17 95.1 117 53.0
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.1e-15 90.1 97 59.8
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 6.8e-15 87.4 60 81.7
Zm00001eb272030 Zea mays HOM05D064467 ORTHO05D445418 4.4e-14 84.7 78 64.1
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 5.8e-14 84.3 89 55.1
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 9.8e-14 83.6 196 39.8
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 3.7e-13 81.6 122 43.4
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 4.9e-13 81.3 65 72.3
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 3.2e-12 78.6 74 67.6
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 4.1e-12 78.2 457 26.0
Zm00001eb271560 Zea mays HOM05D064467 ORTHO05D000476 4.1e-12 78.2 202 35.1
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 7.0e-12 77.4 108 53.7
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 4.6e-11 74.7 324 27.2
HanXRQChr07g0187491 Helianthus annuus HOM05D003521 ORTHO05D000476 2.3e-10 72.4 79 57.0
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 1.1e-09 70.1 71 56.3
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 1.1e-09 70.1 129 45.0
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 5.6e-09 67.8 75 58.7
Ca_16259_v3 Cicer arietinum L. HOM05D001034 ORTHO05D000476 2.1e-08 65.9 71 57.7
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 6.8e-07 60.8 43 72.1


User provided reference genes

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