Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 2.1e-269 931.8 483 100.0
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 3.5e-163 578.9 473 65.5
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 4.2e-92 342.8 460 42.8
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 4.2e-92 342.8 463 42.8
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 9.5e-92 341.7 456 45.2
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 1.8e-90 337.4 448 42.2
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 8.9e-90 335.1 458 41.9
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 8.9e-90 335.1 456 43.6
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 1.2e-89 334.7 459 43.1
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 3.4e-89 333.2 456 42.1
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 7.5e-89 332.0 457 42.0
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 9.8e-89 331.6 460 42.8
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 9.8e-89 331.6 460 42.6
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 6.3e-88 328.9 435 43.2
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.1e-87 328.2 449 42.1
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 7.8e-86 322.0 463 40.6
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 2.3e-85 320.5 449 41.2
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 2.3e-85 320.5 469 40.1
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 2.9e-85 320.1 461 41.4
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 5.0e-85 319.3 461 41.2
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 8.6e-85 318.5 453 41.5
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 7.3e-84 315.5 456 39.9
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 1.2e-83 314.7 461 40.1
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 1.6e-83 314.3 461 40.1
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 8.0e-83 312.0 469 39.7
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 1.0e-82 311.6 464 40.3
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.3e-82 310.5 470 39.4
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 3.1e-82 310.1 463 40.4
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 8.9e-82 308.5 463 41.0
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 2.6e-81 307.0 459 40.7
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 3.4e-81 306.6 459 40.7
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.8e-81 305.8 456 39.7
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 7.5e-81 305.4 468 39.5
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 7.5e-81 305.4 465 40.0
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 9.8e-81 305.1 462 39.0
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.3e-80 304.7 468 41.2
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 2.2e-80 303.9 468 41.0
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 1.2e-78 298.1 456 39.3
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.0e-78 297.4 448 39.1
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.7e-78 297.0 461 39.5
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 3.5e-78 296.6 480 37.9
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 4.6e-78 296.2 465 40.9
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 1.0e-77 295.0 455 39.8
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 3.0e-77 293.5 473 37.8
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 5.0e-77 292.7 463 38.2
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 6.6e-77 292.4 460 38.3
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 6.6e-77 292.4 471 38.9
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 7.3e-76 288.9 452 38.7
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 7.3e-76 288.9 485 38.4
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.2e-75 288.1 457 40.7
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 4.7e-75 286.2 450 37.8
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 6.2e-75 285.8 453 38.2
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 6.2e-75 285.8 458 39.3
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 6.2e-75 285.8 466 38.2
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 8.0e-75 285.4 450 37.8
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 8.0e-75 285.4 406 40.9
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 1.4e-74 284.6 462 39.2
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 2.3e-74 283.9 462 39.6
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 3.1e-74 283.5 452 38.3
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.1e-74 283.5 468 36.8
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 1.2e-73 281.6 457 39.4
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 1.5e-73 281.2 456 39.5
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 4.4e-73 279.6 436 38.3
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 7.5e-73 278.9 457 38.3
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 7.5e-73 278.9 452 38.5
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 9.8e-73 278.5 469 38.4
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.7e-72 277.7 466 36.9
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 4.9e-72 276.2 457 36.1
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 6.4e-72 275.8 457 37.9
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.1e-71 275.0 477 36.7
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.1e-71 275.0 436 37.8
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 2.4e-71 273.9 463 36.1
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 4.1e-71 273.1 455 37.1
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 5.4e-71 272.7 472 37.5
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 7.1e-71 272.3 445 38.9
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 2.1e-70 270.8 466 38.2
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 2.7e-70 270.4 449 38.3
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.0e-69 268.5 454 35.9
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.3e-69 268.1 323 47.1
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 1.7e-69 267.7 452 39.2
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.7e-69 267.7 336 43.5
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.9e-69 266.5 405 38.0
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 6.6e-69 265.8 453 36.6
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 6.6e-69 265.8 454 37.4
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.2e-67 261.5 426 39.2
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.8e-67 260.4 459 37.5
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 1.1e-66 258.5 446 37.2
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.1e-66 258.5 413 38.5
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.2e-65 255.0 445 38.2
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 3.7e-64 250.0 458 35.8
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 9.2e-63 245.4 345 40.3
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.2e-62 245.0 435 38.4
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 3.5e-62 243.4 346 41.0
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 2.5e-60 237.3 461 37.1
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 4.7e-59 233.0 462 34.2
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 1.9e-52 211.1 300 40.7
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.8e-50 204.5 300 42.7
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 3.2e-47 193.7 324 40.1
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 3.8e-32 143.7 185 43.8
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 4.0e-26 123.6 220 36.8
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.2e-24 117.9 254 32.7
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 2.5e-23 114.4 362 27.9
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 7.1e-23 112.8 156 42.3
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.3e-19 102.1 119 43.7
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.1e-18 99.0 119 42.9
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.1e-18 99.0 119 42.9
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 1.5e-17 95.1 489 24.3
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 2.0e-17 94.7 309 29.4
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.3e-16 92.0 165 35.8
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.3e-16 92.0 165 35.8
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.1e-15 89.0 111 42.3
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 3.2e-15 87.4 134 38.1
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.6e-14 83.6 118 39.8
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 6.1e-14 83.2 78 51.3
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 7.9e-14 82.8 128 39.1
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 1.1e-10 72.4 418 24.2
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 2.6e-09 67.8 421 22.1
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 4.5e-09 67.0 137 30.7
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 1.0e-08 65.9 80 40.0
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 2.5e-07 61.2 77 39.0
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.5e-07 61.2 113 30.1


User provided reference genes

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