Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb190460 Zea mays HOM05D002263 ORTHO05D003537 2.8e-71 271.9 147 100.0
Zm00001eb251620 Zea mays HOM05D002263 ORTHO05D003537 2.8e-71 271.9 147 100.0
Zm00001eb188030 Zea mays HOM05D002263 ORTHO05D003537 1.5e-48 196.4 171 71.9
Peaxi162Scf00744g00349 Petunia axillaris HOM05D002263 ORTHO05D003537 1.0e-17 94.0 165 43.0
CAN.G219.44 Capsicum annuum HOM05D002263 ORTHO05D003537 2.3e-17 92.8 173 42.2
Nitab4.5_0002918g0080 Nicotiana tabacum HOM05D002263 ORTHO05D003537 3.0e-17 92.4 169 42.6
PSO832G4242 Papaver somniferum HOM05D002263 ORTHO05D003537 8.9e-17 90.9 161 47.8
Nitab4.5_0000707g0240 Nicotiana tabacum HOM05D002263 ORTHO05D003537 1.2e-16 90.5 168 42.9
Nn2g15271 Nelumbo nucifera HOM05D002263 ORTHO05D003537 3.4e-16 89.0 167 44.9
DCAR_022381 Daucus carota HOM05D002263 ORTHO05D003537 7.5e-16 87.8 172 41.3
Eucgr.H02633 Eucalyptus grandis HOM05D002263 ORTHO05D003537 1.7e-15 86.7 167 41.9
ClCG10G012270 Citrullus lanatus HOM05D002263 ORTHO05D003537 2.2e-15 86.3 167 42.5
Cc02_g28170 Coffea canephora HOM05D002263 ORTHO05D003537 2.2e-15 86.3 172 40.7
CDE10G0015 Ceratophyllum demersum HOM05D002263 ORTHO05D003537 2.8e-15 85.9 155 42.6
A01p09010 Brassica napus HOM05D002263 ORTHO05D003537 3.7e-15 85.5 152 42.8
Rhsim01G0127100 Rhododendron simsii HOM05D002263 ORTHO05D003537 3.7e-15 85.5 176 41.5
Rhsim01G0128300 Rhododendron simsii HOM05D002263 ORTHO05D003537 1.1e-14 84.0 177 39.5
Oeu049493.1 Olea europaea HOM05D002263 ORTHO05D003537 1.8e-14 83.2 165 42.4
Carub.0003s2419 Capsella rubella HOM05D002263 ORTHO05D003537 2.4e-14 82.8 157 41.4
Ciclev10030505m.g Citrus clementina HOM05D002263 ORTHO05D003537 3.1e-14 82.4 147 42.9
Potri.009G058900 Populus trichocarpa HOM05D002263 ORTHO05D003537 3.1e-14 82.4 172 41.3
COL.COLO4_15049 Corchorus olitorius HOM05D002263 ORTHO05D003537 4.1e-14 82.0 158 39.9
PSO063G6561 Papaver somniferum HOM05D002263 ORTHO05D003537 4.1e-14 82.0 160 45.0
Potri.001G264000 Populus trichocarpa HOM05D002263 ORTHO05D003537 4.1e-14 82.0 166 42.2
BraA01t00849Z Brassica rapa HOM05D002263 ORTHO05D003537 7.0e-14 81.3 154 40.9
Sabra09G0043300 Salix brachista HOM05D002263 ORTHO05D003537 7.0e-14 81.3 170 41.8
TAR623G1165 Trochodendron aralioides HOM05D002263 ORTHO05D003537 9.2e-14 80.9 170 40.6
TAR369G0754 Trochodendron aralioides HOM05D002263 ORTHO05D003537 3.5e-13 79.0 171 35.1
Gorai.011G261600 Gossypium raimondii HOM05D002263 ORTHO05D003537 4.5e-13 78.6 168 42.3
Nn7g36257 Nelumbo nucifera HOM05D002263 ORTHO05D003537 4.5e-13 78.6 169 42.6
Atru.chr11.2587 Acer truncatum HOM05D002263 ORTHO05D003537 5.9e-13 78.2 168 42.3
CSS0033402 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 5.9e-13 78.2 176 37.5
Sabra16G0162200 Salix brachista HOM05D002263 ORTHO05D016312 5.9e-13 78.2 170 40.6
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 7.8e-13 77.8 176 37.5
TPR.G22438 Trifolium pratense HOM05D002263 ORTHO05D003537 7.8e-13 77.8 152 40.8
BcaC09g51672 Brassica carinata HOM05D002263 ORTHO05D003537 1.0e-12 77.4 153 40.5
C01p10550 Brassica napus HOM05D002263 ORTHO05D003537 1.0e-12 77.4 153 40.5
Dinv43424 Davidia involucrata HOM05D002263 ORTHO05D003537 1.0e-12 77.4 165 39.4
vmacro14860 Vaccinium macrocarpon HOM05D002263 ORTHO05D003537 1.3e-12 77.0 174 41.4
GSVIVG01032138001 Vitis vinifera HOM05D002263 ORTHO05D003537 1.3e-12 77.0 171 36.3
ATR0332G038 Amborella trichopoda HOM05D002263 ORTHO05D003537 1.7e-12 76.6 158 41.1
AL3G38880 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 2.9e-12 75.9 164 39.6
MSTRG.20571 Avicennia marina HOM05D002263 ORTHO05D003537 3.8e-12 75.5 162 37.7
PGSC0003DMG400006793 Solanum tuberosum HOM05D002263 ORTHO05D003537 3.8e-12 75.5 168 35.1
Actinidia19405 Actinidia chinensis HOM05D002263 ORTHO05D003537 8.6e-12 74.3 180 36.1
CsaV3_3G032050 Cucumis sativus L. HOM05D002263 ORTHO05D003537 8.6e-12 74.3 172 37.2
Glyma.15G276000 Glycine max HOM05D002263 ORTHO05D003537 8.6e-12 74.3 153 42.5
BolC1t01018H Brassica oleracea HOM05D002263 ORTHO05D003537 1.1e-11 73.9 158 39.9
Sopen01g034420 Solanum pennellii HOM05D002263 ORTHO05D003537 1.1e-11 73.9 160 36.9
Solyc01g087500.3 Solanum lycopersicum HOM05D002263 ORTHO05D003537 1.5e-11 73.6 160 39.4
Eucgr.H02748 Eucalyptus grandis HOM05D002263 ORTHO05D003537 1.9e-11 73.2 168 38.7
Lj9C634T13 Lonicera japonica HOM05D002263 ORTHO05D003537 1.9e-11 73.2 167 38.9
Cpa.g.sc125.26 Carica papaya HOM05D002263 ORTHO05D003537 2.5e-11 72.8 164 39.0
HanXRQChr14g0447821 Helianthus annuus HOM05D002263 ORTHO05D003537 2.5e-11 72.8 159 36.5
Aqoxy2G00154 Aquilegia oxysepala HOM05D002263 ORTHO05D003537 3.3e-11 72.4 159 42.1
Glyma.10G090000 Glycine max HOM05D002263 ORTHO05D003537 3.3e-11 72.4 152 41.4
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 3.3e-11 72.4 172 38.4
Manes.10G140100 Manihot esculenta HOM05D002263 ORTHO05D003537 4.3e-11 72.0 169 39.1
Duzib106G1002 Durio zibethinus HOM05D002263 ORTHO05D003537 5.6e-11 71.6 169 34.9
Sed0008745 Sechium edule HOM05D002263 ORTHO05D003537 9.5e-11 70.9 170 36.5
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 2.8e-10 69.3 158 36.7
Thhalv10024219m.g Eutrema salsugineum HOM05D002263 ORTHO05D003537 2.8e-10 69.3 163 36.2
Pp3c18_20260 Physcomitrium patens HOM05D002263 ORTHO05D003537 2.8e-10 69.3 166 38.6
Pp3c18_20261 Physcomitrium patens HOM05D002263 ORTHO05D003537 2.8e-10 69.3 166 38.6
unitig_22.g5326 Utricularia gibba HOM05D002263 ORTHO05D003537 2.8e-10 69.3 144 34.0
HPP92_014707 Vanilla planifolia HOM05D002263 ORTHO05D003537 3.6e-10 68.9 50 70.0
CANSAT80G1724 Cannabis sativa HOM05D002263 ORTHO05D003537 4.7e-10 68.6 166 39.2
RcHm_v2.0_Chr1g0317031 Rosa chinensis HOM05D002263 ORTHO05D003537 4.7e-10 68.6 173 35.3
SalBow5G1665 Salvia bowleyana HOM05D002263 ORTHO05D003537 6.1e-10 68.2 161 39.1
Hma1.2p1_2160F.1_g315580 Hydrangea macrophylla HOM05D002263 ORTHO05D003537 8.0e-10 67.8 49 71.4
MD02G1308000 Malus domestica HOM05D002263 ORTHO05D003537 8.0e-10 67.8 159 38.4
Hund15422 Selenicereus undatus HOM05D002263 ORTHO05D003537 8.0e-10 67.8 162 33.3
Lalb_Chr19g0140281 Lupinus albus HOM05D002263 ORTHO05D003537 1.0e-09 67.4 163 36.8
BcaNung01342 Brassica carinata HOM05D002263 ORTHO05D003537 2.3e-09 66.2 136 39.0
CiPaw.05G149100 Carya illinoinensis HOM05D002263 ORTHO05D003537 2.3e-09 66.2 175 35.4
arahy.Tifrunner.gnm1.ann1.VJ5EI6 Arachis hypogaea HOM05D002263 ORTHO05D003537 3.1e-09 65.9 153 37.9
Ca_14467_v3 Cicer arietinum L. HOM05D002263 ORTHO05D003537 3.1e-09 65.9 150 39.3
MELO3C023986.2 Cucumis melo HOM05D002263 ORTHO05D003537 3.1e-09 65.9 188 33.0
SEGI_34540 Sequoiadendron giganteum HOM05D002263 ORTHO05D003537 5.2e-09 65.1 140 41.4
Prupe.2G017500 Prunus persica HOM05D002263 ORTHO05D003537 8.9e-09 64.3 142 36.6
CARHR061100 Cardamine hirsuta HOM05D002263 ORTHO05D003537 1.2e-08 63.9 50 60.0
unitig_8.g3777 Utricularia gibba HOM05D002263 ORTHO05D003537 1.5e-08 63.5 151 38.4
QL04p008074 Quercus lobata HOM05D002263 ORTHO05D003537 2.0e-08 63.2 64 51.6
QL04p008574 Quercus lobata HOM05D002263 ORTHO05D003537 2.0e-08 63.2 64 51.6
Sed0023112 Sechium edule HOM05D002263 ORTHO05D003537 2.0e-08 63.2 184 36.4
Sed0024297 Sechium edule HOM05D002263 ORTHO05D003537 2.0e-08 63.2 169 38.5
Medtr3g031040 Medicago truncatula HOM05D002263 ORTHO05D003537 2.6e-08 62.8 151 38.4
THA.LOC104820131 Tarenaya hassleriana HOM05D002263 ORTHO05D003537 2.6e-08 62.8 163 35.0
arahy.Tifrunner.gnm1.ann1.NCP65V Arachis hypogaea HOM05D002263 ORTHO05D003537 5.8e-08 61.6 153 36.6
Mapoly0050s0134 Marchantia polymorpha HOM05D002263 ORTHO05D003537 5.8e-08 61.6 166 36.1
HanXRQChr01g0016471 Helianthus annuus HOM05D002263 ORTHO05D003537 7.5e-08 61.2 156 35.3
QL04p008589 Quercus lobata HOM05D002263 ORTHO05D003537 7.5e-08 61.2 61 54.1
BcaNung00438 Brassica carinata HOM05D002263 ORTHO05D003537 1.7e-07 60.1 161 34.2
FvH4_7g01280 Fragaria vesca HOM05D002263 ORTHO05D003537 1.7e-07 60.1 174 32.8
FAN10G1377 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.7e-07 60.1 174 32.2
Sc16g0001930 Simmondsia chinensis HOM05D002263 ORTHO05D003537 1.7e-07 60.1 162 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3755 Anthoceros agrestis HOM05D002263 ORTHO05D003537 2.2e-07 59.7 161 36.6
Phvul.005G024200 Phaseolus vulgaris HOM05D002263 ORTHO05D003537 2.2e-07 59.7 153 35.9
FAN06G0127 Fragaria x ananassa HOM05D002263 ORTHO05D003537 2.9e-07 59.3 169 34.3
QL04p008683 Quercus lobata HOM05D002263 ORTHO05D003537 2.9e-07 59.3 64 48.4
CiPaw.14G001600 Carya illinoinensis HOM05D002263 ORTHO05D003537 3.7e-07 58.9 173 32.4
FAN01G0038 Fragaria x ananassa HOM05D002263 ORTHO05D003537 3.7e-07 58.9 174 31.6
FAN03G0380 Fragaria x ananassa HOM05D002263 ORTHO05D003537 3.7e-07 58.9 174 31.6
Gohir.A10G219600 Gossypium hirsutum HOM05D002263 ORTHO05D003537 3.7e-07 58.9 48 60.4
Gohir.D10G229100 Gossypium hirsutum HOM05D002263 ORTHO05D003537 3.7e-07 58.9 48 60.4
MD07G1017700 Malus domestica HOM05D002263 ORTHO05D003537 3.7e-07 58.9 62 51.6
Aa31LG5G18570 Aethionema arabicum HOM05D002263 ORTHO05D003537 4.9e-07 58.5 161 33.5
AUR62023080 Chenopodium quinoa HOM05D002263 ORTHO05D003537 4.9e-07 58.5 149 35.6
Thecc.10G041300 Theobroma cacao HOM05D002263 ORTHO05D003537 4.9e-07 58.5 163 33.1
Migut.B01281 Erythranthe guttata HOM05D002263 ORTHO05D003537 6.4e-07 58.2 169 36.1
Lj2C383G13 Lonicera japonica HOM05D002263 ORTHO05D003537 8.3e-07 57.8 107 42.1
QL04p008050 Quercus lobata HOM05D002263 ORTHO05D012916 8.3e-07 57.8 64 46.9
SGA_v2.0_scaffold119G32746 Striga asiatica HOM05D002263 ORTHO05D003537 8.3e-07 57.8 160 34.4
QL08p003465 Quercus lobata HOM05D002263 ORTHO05D012916 1.1e-06 57.4 58 48.3
AT3G23890 Arabidopsis thaliana HOM05D002263 ORTHO05D003537 1.4e-06 57.0 86 36.0
Pp3c19_3610 Physcomitrium patens HOM05D002263 ORTHO05D003537 1.4e-06 57.0 115 34.8
RcHm_v2.0_Chr1g0375001 Rosa chinensis HOM05D002263 ORTHO05D003537 3.2e-06 55.8 123 37.4
Sp7g26900 Schrenkiella parvula HOM05D002263 ORTHO05D003537 4.1e-06 55.5 165 33.3
AUR62009398 Chenopodium quinoa HOM05D002263 ORTHO05D003537 5.4e-06 55.1 158 38.0
SMO147G0130 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 7.0e-06 54.7 50 58.0
SMO330G0020 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 7.0e-06 54.7 50 58.0
QL02p043717 Quercus lobata HOM05D002263 ORTHO05D012916 9.2e-06 54.3 49 55.1


User provided reference genes

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