Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb133060 Zea mays HOM05D003044 ORTHO05D001869 0.0e+00 1857.4 1035 100.0
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 2.1e-24 119.0 502 29.1
Gohir.D04G019000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 5.3e-23 114.4 488 29.1
Manes.07G084000 Manihot esculenta HOM05D003044 ORTHO05D001869 2.6e-22 112.1 588 27.0
CiPaw.13G045500 Carya illinoinensis HOM05D003044 ORTHO05D001869 9.9e-22 110.2 488 30.5
Nn2g14384 Nelumbo nucifera HOM05D003044 ORTHO05D001869 9.9e-22 110.2 482 28.4
Duzib114G0797 Durio zibethinus HOM05D003044 ORTHO05D001869 1.3e-21 109.8 532 30.8
Glyma.20G070600 Glycine max HOM05D003044 ORTHO05D001869 1.3e-21 109.8 497 28.8
Gorai.012G022500 Gossypium raimondii HOM05D003044 ORTHO05D001869 3.8e-21 108.2 492 29.5
Nn6g34609 Nelumbo nucifera HOM05D003044 ORTHO05D001869 3.8e-21 108.2 485 29.1
TWI15G1087 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 4.9e-21 107.8 488 27.7
Duzib128G0650 Durio zibethinus HOM05D003044 ORTHO05D001869 1.9e-20 105.9 569 27.2
Gohir.A05G396000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.9e-20 105.9 493 28.8
Prupe.2G074800 Prunus persica HOM05D003044 ORTHO05D001869 4.2e-20 104.8 563 27.7
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 7.1e-20 104.0 524 27.9
Gorai.012G022400 Gossypium raimondii HOM05D003044 ORTHO05D001869 1.2e-19 103.2 563 28.4
Potri.010G244700 Populus trichocarpa HOM05D003044 ORTHO05D001869 1.6e-19 102.8 481 29.5
Sabra08G0009300 Salix brachista HOM05D003044 ORTHO05D001869 1.6e-19 102.8 490 30.6
Potri.008G014800 Populus trichocarpa HOM05D003044 ORTHO05D001869 3.5e-19 101.7 503 29.4
Aa31LG3G3500 Aethionema arabicum HOM05D003044 ORTHO05D001869 4.6e-19 101.3 478 27.8
Gohir.A05G396100 Gossypium hirsutum HOM05D003044 ORTHO05D001869 4.6e-19 101.3 585 27.9
Manes.10G059500 Manihot esculenta HOM05D003044 ORTHO05D001869 6.7e-18 97.4 622 28.1
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 1.1e-17 96.7 488 28.3
ATR0697G055 Amborella trichopoda HOM05D003044 ORTHO05D001869 1.5e-17 96.3 494 29.4
CAN.G143.56 Capsicum annuum HOM05D003044 ORTHO05D001869 1.5e-17 96.3 782 26.3
CARHR085230 Cardamine hirsuta HOM05D003044 ORTHO05D001869 1.5e-17 96.3 480 27.3
EL10Ac8g19444 Beta vulgaris HOM05D003044 ORTHO05D001869 4.3e-17 94.7 484 29.3
Dinv04420 Davidia involucrata HOM05D003044 ORTHO05D001869 4.3e-17 94.7 323 30.7
MBI05_g36784_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 4.3e-17 94.7 330 30.0
Thhalv10019905m.g Eutrema salsugineum HOM05D003044 ORTHO05D001869 5.6e-17 94.4 479 26.9
MD02G1257800 Malus domestica HOM05D003044 ORTHO05D001869 1.6e-16 92.8 502 29.1
PGR044G1498 Punica granatum HOM05D003044 ORTHO05D001869 3.7e-16 91.7 489 27.2
Actinidia34738 Actinidia chinensis HOM05D003044 ORTHO05D001869 1.8e-15 89.4 516 26.0
Sed0023754 Sechium edule HOM05D003044 ORTHO05D001869 3.1e-15 88.6 545 27.9
Solyc11g006390.2 Solanum lycopersicum HOM05D003044 ORTHO05D001869 3.1e-15 88.6 562 27.2
A01p41560 Brassica napus HOM05D003044 ORTHO05D001869 1.2e-14 86.7 482 26.1
Hma1.2p1_0098F.1_g048320 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 2.6e-14 85.5 523 27.5
Peaxi162Scf00120g00721 Petunia axillaris HOM05D003044 ORTHO05D001869 7.6e-14 84.0 467 27.2
Psat6g171360 Pisum sativum HOM05D003044 ORTHO05D001869 7.6e-14 84.0 486 27.2
Phvul.007G233800 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 1.0e-13 83.6 754 26.4
ECA238G0186 Erigeron canadensis HOM05D003044 ORTHO05D001869 1.3e-13 83.2 484 26.4
Lsat_1_v5_gn_8_21821 Lactuca sativa HOM05D003044 ORTHO05D001869 1.3e-13 83.2 499 26.5
Lalb_Chr19g0128991 Lupinus albus HOM05D003044 ORTHO05D001869 1.7e-13 82.8 946 25.5
ECA233G5261 Erigeron canadensis HOM05D003044 ORTHO05D001869 2.2e-13 82.4 405 26.2
Carub.0003s0988 Capsella rubella HOM05D003044 ORTHO05D001869 3.8e-13 81.6 482 26.1
Gohir.D04G018900 Gossypium hirsutum HOM05D003044 ORTHO05D001869 4.9e-13 81.3 807 26.3
Oeu040012.1 Olea europaea HOM05D003044 ORTHO05D001869 4.9e-13 81.3 363 27.5
QL02p088845 Quercus lobata HOM05D006756 ORTHO05D001869 8.4e-13 80.5 648 25.3
ClCG08G008450 Citrullus lanatus HOM05D003044 ORTHO05D001869 4.2e-12 78.2 587 25.9
Os03g0788300 Oryza sativa ssp. japonica HOM05D003044 ORTHO05D001869 9.3e-12 77.0 322 28.9
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 2.7e-11 75.5 905 24.1
Sp3g08960 Schrenkiella parvula HOM05D003044 ORTHO05D001869 4.6e-11 74.7 796 23.6
TPR.G19799 Trifolium pratense HOM05D003044 ORTHO05D001869 4.6e-11 74.7 533 24.8
Medtr1g090340 Medicago truncatula HOM05D003044 ORTHO05D001869 7.9e-11 73.9 686 22.9
QL04p049165 Quercus lobata HOM05D003044 ORTHO05D001869 1.8e-10 72.8 335 28.7
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 1.8e-10 72.8 472 26.7
Ca_10372_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 2.3e-10 72.4 709 24.4
Lsat_1_v5_gn_2_106321 Lactuca sativa HOM05D003044 ORTHO05D001869 2.3e-10 72.4 1180 25.9
Aqoxy2G00627 Aquilegia oxysepala HOM05D003044 ORTHO05D001869 3.0e-10 72.0 477 27.0
Os12g0456400 Oryza sativa ssp. japonica HOM05D003044 ORTHO05D001869 3.0e-10 72.0 245 37.6
Hund22391 Selenicereus undatus HOM05D003044 ORTHO05D001869 3.0e-10 72.0 475 25.7
unitig_46.g18649 Utricularia gibba HOM05D003044 ORTHO05D001869 3.0e-10 72.0 814 25.7
VMungo0720G1731 Vigna mungo HOM05D003044 ORTHO05D001869 3.0e-10 72.0 946 24.3
Haze_03430 Corylus avellana HOM05D003044 ORTHO05D001869 5.1e-10 71.2 930 25.3
Medtr1g040610 Medicago truncatula HOM05D003044 ORTHO05D001869 5.1e-10 71.2 741 24.4
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 5.1e-10 71.2 255 32.2
Duzib106G0590 Durio zibethinus HOM05D003044 ORTHO05D001869 6.7e-10 70.9 1030 24.6
TAR633G1492 Trochodendron aralioides HOM05D003044 ORTHO05D001869 6.7e-10 70.9 1145 24.5
GSVIVG01034601001 Vitis vinifera HOM05D003044 ORTHO05D001869 6.7e-10 70.9 653 25.3
TAR636G2086 Trochodendron aralioides HOM05D006756 ORTHO05D001869 8.7e-10 70.5 514 26.3
Lalb_Chr01g0010681 Lupinus albus HOM05D003044 ORTHO05D001869 1.1e-09 70.1 778 25.2
MSTRG.27548 Avicennia marina HOM05D003044 ORTHO05D001869 1.5e-09 69.7 468 26.1
MBI01_g36593_MAGBIO Magnolia biondii HOM05D006756 ORTHO05D001869 1.9e-09 69.3 502 27.3
Glyma.20G195200 Glycine max HOM05D003044 ORTHO05D001869 2.5e-09 68.9 784 23.0
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 3.3e-09 68.6 424 25.7
AT3G10650 Arabidopsis thaliana HOM05D003044 ORTHO05D001869 4.3e-09 68.2 920 24.1
Lj3A920T29 Lonicera japonica HOM05D003044 ORTHO05D001869 1.3e-08 66.6 387 24.5
CSS0029861 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 1.6e-08 66.2 632 22.6
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 1.6e-08 66.2 541 23.8
CDE07G1072 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 2.8e-08 65.5 1248 24.6
Lalb_Chr02g0150891 Lupinus albus HOM05D003044 ORTHO05D001869 2.8e-08 65.5 943 24.7
Rhsim09G0140200 Rhododendron simsii HOM05D003044 ORTHO05D001869 2.8e-08 65.5 409 26.7
PSO170G5384 Papaver somniferum HOM05D006756 ORTHO05D001869 3.7e-08 65.1 485 25.6
Sabra10G0191200 Salix brachista HOM05D003044 ORTHO05D001869 3.7e-08 65.1 277 28.9
MELO3C019915.2 Cucumis melo HOM05D003044 ORTHO05D001869 4.8e-08 64.7 589 23.8
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 4.8e-08 64.7 1242 23.1
FvH4_7g05440 Fragaria vesca HOM05D003044 ORTHO05D001869 4.8e-08 64.7 312 26.6
Atru.chr12.1091 Acer truncatum HOM05D003044 ORTHO05D001869 6.2e-08 64.3 237 29.1
TAR625G0109 Trochodendron aralioides HOM05D006756 ORTHO05D001869 6.2e-08 64.3 515 25.2
Ciclev10014057m.g Citrus clementina HOM05D003044 ORTHO05D001869 8.2e-08 63.9 983 24.8
Ah.14g085720 Amaranthus hybridus HOM05D003044 ORTHO05D001869 1.4e-07 63.2 476 25.6
arahy.Tifrunner.gnm1.ann1.JKR5UJ Arachis hypogaea HOM05D003044 ORTHO05D001869 1.4e-07 63.2 915 23.5
Cfa010501 Carpinus fangiana HOM05D003044 ORTHO05D001869 1.4e-07 63.2 925 24.6
AL3G22120 Arabidopsis lyrata HOM05D003044 ORTHO05D001869 2.4e-07 62.4 1026 23.8
CiPaw.03G245600 Carya illinoinensis HOM05D006756 ORTHO05D001869 2.4e-07 62.4 607 23.1
HanXRQChr07g0194411 Helianthus annuus HOM05D003044 ORTHO05D001869 2.4e-07 62.4 757 25.0
PSO384G0573 Papaver somniferum HOM05D003044 ORTHO05D001869 2.4e-07 62.4 1277 24.2
unitig_736.g22522 Utricularia gibba HOM05D003044 ORTHO05D001869 4.1e-07 61.6 550 23.3
Psat1g024440 Pisum sativum HOM05D006756 ORTHO05D001869 5.3e-07 61.2 489 24.7
CAN.G1433.1 Capsicum annuum HOM05D003044 ORTHO05D001869 6.9e-07 60.8 327 26.6
HanXRQChr05g0140241 Helianthus annuus HOM05D006756 ORTHO05D001869 6.9e-07 60.8 379 27.7
Medtr2g072590 Medicago truncatula HOM05D006756 ORTHO05D001869 6.9e-07 60.8 480 24.8
PSO339G5639 Papaver somniferum HOM05D003044 ORTHO05D001869 6.9e-07 60.8 1068 23.8
THA.LOC104823155 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 1.2e-06 60.1 993 24.6
arahy.Tifrunner.gnm1.ann1.Y6HWEI Arachis hypogaea HOM05D003044 ORTHO05D001869 2.0e-06 59.3 885 23.8
HanXRQChr02g0049311 Helianthus annuus HOM05D003044 ORTHO05D001869 2.0e-06 59.3 450 24.4
TAR636G0745 Trochodendron aralioides HOM05D006756 ORTHO05D001869 2.0e-06 59.3 514 25.7
CsaV3_6G004440 Cucumis sativus L. HOM05D003044 ORTHO05D001869 2.6e-06 58.9 715 24.1
Lalb_Chr21g0312741 Lupinus albus HOM05D003044 ORTHO05D001869 2.6e-06 58.9 765 23.7
HPP92_019542 Vanilla planifolia HOM05D003044 ORTHO05D001869 2.6e-06 58.9 423 24.8
HanXRQChr07g0195171 Helianthus annuus HOM05D003044 ORTHO05D001869 4.5e-06 58.2 230 29.1
CANSAT56G3871 Cannabis sativa HOM05D003044 ORTHO05D001869 1.0e-05 57.0 811 24.0
CiPaw.14G036200 Carya illinoinensis HOM05D003044 ORTHO05D001869 1.0e-05 57.0 1037 23.9
Oeu025606.1 Olea europaea HOM05D003044 ORTHO05D001869 1.0e-05 57.0 943 24.7


User provided reference genes

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