Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 2.2e-171 605.5 299 100.0
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 2.7e-161 572.0 300 93.3
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 1.3e-144 516.5 300 85.0
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 1.9e-143 512.7 299 83.9
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 2.5e-143 512.3 299 84.6
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 4.7e-142 508.1 302 85.4
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 1.1e-141 506.9 300 84.3
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 1.8e-141 506.1 301 83.4
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 2.3e-141 505.8 300 84.0
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 1.4e-138 496.5 270 91.5
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 7.1e-138 494.2 302 80.5
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 1.6e-137 493.0 293 81.6
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 7.8e-137 490.7 300 80.0
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 1.7e-136 489.6 294 81.6
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 2.3e-136 489.2 301 81.1
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 3.9e-136 488.4 294 80.6
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 5.1e-136 488.0 300 80.3
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 6.6e-136 487.6 303 79.5
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 1.1e-135 486.9 294 80.6
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 1.9e-135 486.1 300 80.3
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 2.5e-135 485.7 299 79.3
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 2.5e-135 485.7 300 79.3
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 4.3e-135 485.0 300 79.7
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 5.6e-135 484.6 311 78.5
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 9.5e-135 483.8 294 79.9
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 1.2e-134 483.4 300 79.3
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 1.2e-134 483.4 302 78.5
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 1.2e-134 483.4 295 80.7
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.6e-134 483.0 295 80.0
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 2.1e-134 482.6 301 80.1
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 2.8e-134 482.3 296 80.1
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 4.7e-134 481.5 301 80.4
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 6.2e-134 481.1 295 80.0
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 1.1e-133 480.3 301 80.1
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 1.8e-133 479.6 294 79.6
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 1.8e-133 479.6 294 78.6
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 3.1e-133 478.8 302 78.8
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 4.0e-133 478.4 294 78.6
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 4.0e-133 478.4 294 78.9
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 5.2e-133 478.0 295 79.7
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 8.9e-133 477.2 294 78.6
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 1.2e-132 476.9 296 78.0
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 1.2e-132 476.9 300 78.0
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 1.5e-132 476.5 295 79.0
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 2.0e-132 476.1 327 73.7
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 2.0e-132 476.1 294 78.6
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 1.7e-131 473.0 325 72.9
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 1.7e-131 473.0 300 77.3
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 4.9e-131 471.5 294 78.2
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 8.4e-131 470.7 299 76.6
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 3.2e-130 468.8 295 78.3
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 3.2e-130 468.8 294 77.6
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 4.1e-130 468.4 301 76.4
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 1.2e-129 466.8 288 78.1
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 4.6e-129 464.9 297 75.8
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 4.6e-129 464.9 302 76.2
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 6.0e-129 464.5 295 77.3
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 1.0e-128 463.8 300 76.3
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 1.3e-128 463.4 283 80.9
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 2.3e-128 462.6 294 76.2
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 3.9e-128 461.8 300 76.0
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 8.7e-128 460.7 300 76.0
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 1.1e-127 460.3 300 75.3
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 3.3e-127 458.8 292 75.3
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 1.6e-126 456.4 300 74.7
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 5.2e-125 451.4 300 74.3
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 5.2e-125 451.4 298 74.5
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 1.2e-124 450.3 329 70.2
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 1.5e-124 449.9 301 74.1
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 1.3e-123 446.8 284 78.2
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 8.4e-123 444.1 293 73.7
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 8.4e-123 444.1 299 72.6
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 4.2e-122 441.8 293 73.4
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 4.2e-122 441.8 300 72.3
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 5.4e-122 441.4 293 73.4
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 5.4e-122 441.4 293 73.4
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 5.4e-122 441.4 293 73.4
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 7.1e-122 441.0 295 72.9
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 7.1e-122 441.0 293 73.0
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 7.1e-122 441.0 295 72.5
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 2.7e-121 439.1 295 70.8
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 3.0e-120 435.6 300 72.0
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 1.1e-119 433.7 293 71.0
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 2.4e-117 426.0 313 69.3
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 1.5e-116 423.3 300 73.3
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 7.6e-116 421.0 239 84.1
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 1.3e-115 420.2 270 78.1
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 1.3e-115 420.2 281 74.4
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 6.4e-115 417.9 248 80.2
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 8.4e-115 417.5 296 70.6
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 1.5e-111 406.8 237 81.4
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 8.1e-110 401.0 293 67.6
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 7.6e-108 394.4 234 79.1
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 2.2e-107 392.9 250 77.2
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 6.4e-107 391.3 269 71.4
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 7.1e-106 387.9 222 82.9
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 1.6e-105 386.7 238 80.7
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 2.7e-89 332.8 289 56.1
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 4.6e-89 332.0 241 64.7
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 5.7e-87 325.1 292 54.1
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 1.3e-83 313.9 409 47.9
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 1.2e-81 307.4 284 62.3
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 8.8e-80 301.2 210 69.0
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 6.5e-67 258.5 153 86.3
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 1.2e-63 247.7 231 55.4
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 7.0e-61 238.4 260 53.8
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 1.5e-55 220.7 223 57.8
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 2.6e-55 219.9 291 39.2
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 9.1e-53 211.5 117 81.2
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 2.7e-52 209.9 238 46.2
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 7.7e-52 208.4 119 83.2
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 4.9e-46 189.1 190 53.2
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 3.4e-39 166.4 175 54.3
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 4.1e-37 159.5 234 41.5
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 8.9e-32 141.7 103 66.0
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 1.3e-27 127.9 73 84.9
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 2.8e-25 120.2 82 74.4
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 2.3e-19 100.5 52 92.3
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 4.3e-18 96.3 53 81.1
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 1.8e-16 90.9 60 73.3
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 1.5e-15 87.8 157 38.2
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 2.6e-15 87.0 203 33.0
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 1.7e-14 84.3 52 76.9
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 1.1e-13 81.6 47 80.9
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 4.2e-13 79.7 59 62.7
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 9.2e-13 78.6 63 71.4
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 2.7e-12 77.0 54 72.2
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 2.5e-10 70.5 166 31.9
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 2.8e-09 67.0 83 50.6
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 9.0e-08 62.0 169 29.0
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 1.5e-07 61.2 179 29.6
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 5.8e-07 59.3 166 29.5
BolC8t51460H Brassica oleracea HOM05D005598 ORTHO05D041141 9.9e-07 58.5 42 71.4
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 9.9e-07 58.5 94 42.6
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 2.9e-06 57.0 29 79.3
Psat6g121040 Pisum sativum HOM05D005598 ORTHO05D324080 8.4e-06 55.5 299 25.1


User provided reference genes

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