Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10028281m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.3e-132 476.5 258 100.0
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 2.5e-83 312.8 236 74.2
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 3.6e-82 308.9 227 75.8
AL7G50480 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 1.6e-50 203.8 217 60.8
AL7G50550 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 1.8e-49 200.3 223 57.0
AL7G49930 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 5.9e-48 195.3 223 55.6
Carub.0003s3325 Capsella rubella HOM05D006887 ORTHO05D004325 2.3e-44 183.3 234 51.7
AT5G41200 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.2e-42 176.8 221 53.4
AT5G38740 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 3.1e-41 172.9 247 49.8
Carub.0007s3561 Capsella rubella HOM05D006887 ORTHO05D004325 9.0e-41 171.4 216 52.3
Carub.0007s3559 Capsella rubella HOM05D006887 ORTHO05D004325 1.7e-39 167.2 234 50.9
AT5G40220 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 5.5e-38 162.2 257 47.1
BcaB08g34810 Brassica carinata HOM05D006887 ORTHO05D004325 2.0e-35 153.7 236 50.0
BolC4t26255H Brassica oleracea HOM05D006887 ORTHO05D004325 2.0e-35 153.7 228 49.6
C04p46670 Brassica napus HOM05D006887 ORTHO05D004325 2.5e-35 153.3 226 49.1
AT5G40120 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.3e-34 151.0 209 51.2
AT5G39750 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.2e-34 150.2 256 44.9
Carub.0007s3594 Capsella rubella HOM05D006887 ORTHO05D004325 3.7e-34 149.4 207 50.2
BcaB06g27394 Brassica carinata HOM05D006887 ORTHO05D004325 4.8e-34 149.1 228 48.2
BcaB06g27671 Brassica carinata HOM05D006887 ORTHO05D004325 6.3e-34 148.7 234 47.9
AL8G42910 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 1.1e-33 147.9 230 47.0
A04p12980 Brassica napus HOM05D006887 ORTHO05D004325 1.8e-33 147.1 234 45.7
AT4G11250 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 9.1e-33 144.8 220 47.3
AT5G65330 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 3.8e-31 139.4 217 48.4
BcaB06g27414 Brassica carinata HOM05D006887 ORTHO05D004325 3.8e-31 139.4 234 44.0
C04p46390 Brassica napus HOM05D006887 ORTHO05D004325 1.4e-30 137.5 209 46.4
BraA04t16961Z Brassica rapa HOM05D006887 ORTHO05D004325 2.1e-29 133.7 231 48.1
BcaB06g27392 Brassica carinata HOM05D008478 ORTHO05D000740 1.4e-28 131.0 223 46.2
BcaB06g27442 Brassica carinata HOM05D006887 ORTHO05D004325 1.4e-28 131.0 220 47.7
Carub.0008s2621 Capsella rubella HOM05D006887 ORTHO05D004325 1.8e-28 130.6 198 47.5
Thhalv10005313m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.8e-28 130.6 224 45.1
Carub.0007s3592 Capsella rubella HOM05D006887 ORTHO05D004325 8.8e-28 128.3 148 55.4
C04p46750 Brassica napus HOM05D006887 ORTHO05D004325 9.7e-27 124.8 226 46.5
BolC4t26262H Brassica oleracea HOM05D006887 ORTHO05D004325 1.7e-26 124.0 221 45.7
A04p13000 Brassica napus HOM05D006887 ORTHO05D004325 2.8e-26 123.2 232 47.0
AT5G37415 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 8.2e-26 121.7 146 56.2
Sp2g28440 Schrenkiella parvula HOM05D006887 ORTHO05D004325 9.1e-25 118.2 223 42.6
A04p12860 Brassica napus HOM05D006887 ORTHO05D004325 4.5e-24 115.9 234 44.0
BraA04t16949Z Brassica rapa HOM05D006887 ORTHO05D004325 4.5e-24 115.9 232 44.4
BcaB06g27670 Brassica carinata HOM05D006887 ORTHO05D004325 3.8e-23 112.8 216 41.7
BraA04t16959Z Brassica rapa HOM05D006887 ORTHO05D004325 2.5e-22 110.2 225 40.9
BcaC03g18328 Brassica carinata HOM05D006887 ORTHO05D004325 3.2e-22 109.8 215 39.1
C02p64040 Brassica napus HOM05D006887 ORTHO05D004325 3.2e-22 109.8 215 39.1
BolC2t12470H Brassica oleracea HOM05D006887 ORTHO05D004325 3.2e-22 109.8 215 39.1
A02p43880 Brassica napus HOM05D006887 ORTHO05D004325 1.2e-21 107.8 215 37.7
BraA02t09311Z Brassica rapa HOM05D006887 ORTHO05D004325 1.2e-21 107.8 215 37.7
BolC4t26260H Brassica oleracea HOM05D006887 ORTHO05D004325 1.6e-21 107.5 206 43.7
AT5G39810 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 1.0e-20 104.8 243 39.5
BraA04t16923Z Brassica rapa HOM05D006887 ORTHO05D004325 1.0e-20 104.8 205 41.0
CARHR279290 Cardamine hirsuta HOM05D006887 ORTHO05D004325 6.7e-20 102.1 169 43.2
CARHR058360 Cardamine hirsuta HOM05D006887 ORTHO05D004325 1.5e-19 100.9 173 42.8
AT5G40070 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 5.9e-16 89.0 168 40.5
CARHR094030 Cardamine hirsuta HOM05D006887 ORTHO05D004325 2.3e-12 77.0 156 44.2
Carub.0003s1843 Capsella rubella HOM05D006887 ORTHO05D004325 5.2e-12 75.9 147 38.1
AL3G31960 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 3.1e-09 66.6 148 36.5
CARHR157630 Cardamine hirsuta HOM05D006887 ORTHO05D004325 7.0e-09 65.5 136 41.2
AT3G18650 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 2.7e-08 63.5 146 35.6
CARHR283740 Cardamine hirsuta HOM05D006887 ORTHO05D004325 2.7e-08 63.5 156 37.8
Sp3g16720 Schrenkiella parvula HOM05D006887 ORTHO05D004325 7.7e-08 62.0 146 39.0
BcaC05g28586 Brassica carinata HOM05D006887 ORTHO05D004325 3.8e-07 59.7 141 38.3
BolC5t33421H Brassica oleracea HOM05D006887 ORTHO05D004325 3.8e-07 59.7 141 38.3
BraA05t21939Z Brassica rapa HOM05D006887 ORTHO05D004325 3.8e-07 59.7 146 41.1
BcaB06g25916 Brassica carinata HOM05D006887 ORTHO05D004325 4.2e-06 56.2 143 35.0
CARHR112470 Cardamine hirsuta HOM05D006887 ORTHO05D004325 4.2e-06 56.2 98 43.9
AT4G02235 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 5.5e-06 55.8 73 56.2
Thhalv10022126m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 5.5e-06 55.8 173 34.7
BcaC08g43051 Brassica carinata HOM05D007946 ORTHO05D004325 9.4e-06 55.1 178 31.5


User provided reference genes

Program Settings