Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G068400 Theobroma cacao HOM05D004198 ORTHO05D006470 2.1e-216 755.4 368 100.0
Duzib168G0961 Durio zibethinus HOM05D004198 ORTHO05D006470 4.5e-187 657.9 364 87.9
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 1.7e-165 586.3 366 75.4
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 2.9e-165 585.5 366 74.9
Haze_26080 Corylus avellana HOM05D004198 ORTHO05D006470 6.0e-163 577.8 366 74.9
TWI63G0157 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 6.0e-163 577.8 363 75.8
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 3.0e-162 575.5 366 73.8
Ciclev10008705m.g Citrus clementina HOM05D004198 ORTHO05D006470 3.9e-162 575.1 366 75.1
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 8.6e-162 573.9 366 74.3
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 1.9e-161 572.8 366 74.3
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 1.9e-161 572.8 366 73.8
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 9.5e-161 570.5 366 73.2
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 1.6e-160 569.7 368 73.1
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 1.4e-159 566.6 364 72.5
Atru.chr7.1795 Acer truncatum HOM05D004198 ORTHO05D006470 2.4e-159 565.8 365 75.6
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.2e-158 563.5 364 72.3
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 2.0e-158 562.8 366 73.0
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 4.4e-158 561.6 364 72.3
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 5.8e-158 561.2 366 71.9
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 5.8e-158 561.2 364 73.4
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 1.3e-157 560.1 366 72.1
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 1.3e-157 560.1 366 73.5
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 1.1e-156 557.0 366 73.0
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 2.4e-156 555.8 366 72.1
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 5.4e-156 554.7 366 71.6
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.6e-155 553.1 362 72.7
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 2.1e-155 552.7 363 73.6
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 2.7e-155 552.4 366 70.2
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 3.5e-155 552.0 362 72.7
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 4.6e-155 551.6 366 72.7
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 4.6e-155 551.6 362 72.4
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 6.0e-155 551.2 362 72.9
Ah.09g228850 Amaranthus hybridus HOM05D004198 ORTHO05D006470 1.3e-154 550.1 359 71.3
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 1.3e-154 550.1 364 71.4
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 1.3e-154 550.1 366 70.8
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 2.3e-154 549.3 366 70.8
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 3.0e-154 548.9 366 71.3
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 5.1e-154 548.1 366 70.8
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 6.6e-154 547.7 366 71.6
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 8.7e-154 547.4 360 70.3
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 8.7e-154 547.4 366 71.9
Cc00_g13770 Coffea canephora HOM05D004198 ORTHO05D006470 1.5e-153 546.6 366 72.1
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 1.5e-153 546.6 366 71.6
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 1.9e-153 546.2 366 71.6
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 3.3e-153 545.4 364 71.2
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 3.3e-153 545.4 366 70.2
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 4.3e-153 545.0 366 71.0
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 4.3e-153 545.0 366 70.5
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 7.3e-153 544.3 366 71.6
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 7.3e-153 544.3 364 71.2
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 6.2e-152 541.2 366 70.2
Psat4g019880 Pisum sativum HOM05D004198 ORTHO05D006470 6.2e-152 541.2 366 69.9
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 6.2e-152 541.2 366 70.8
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 1.1e-151 540.4 366 71.0
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 1.1e-151 540.4 367 70.3
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 1.8e-151 539.7 364 71.7
A03p61830 Brassica napus HOM05D004198 ORTHO05D006470 3.1e-151 538.9 366 68.0
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 3.1e-151 538.9 366 68.3
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 3.1e-151 538.9 366 69.1
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 3.1e-151 538.9 364 70.6
C07p59520 Brassica napus HOM05D004198 ORTHO05D006470 4.0e-151 538.5 364 69.5
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 4.0e-151 538.5 366 68.9
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 4.0e-151 538.5 363 71.9
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 4.0e-151 538.5 363 71.3
Actinidia33515 Actinidia chinensis HOM05D004198 ORTHO05D006470 5.2e-151 538.1 372 70.7
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 5.2e-151 538.1 364 70.9
BolC7t46396H Brassica oleracea HOM05D004198 ORTHO05D006470 5.2e-151 538.1 364 69.2
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 5.2e-151 538.1 366 71.3
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 9.0e-151 537.3 364 69.0
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 9.0e-151 537.3 366 69.7
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 1.5e-150 536.6 363 69.4
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 2.0e-150 536.2 366 69.7
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 2.0e-150 536.2 366 68.9
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 2.0e-150 536.2 366 69.7
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 2.6e-150 535.8 364 70.9
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 3.4e-150 535.4 366 68.6
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 5.8e-150 534.6 366 69.9
PGSC0003DMG401015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 5.8e-150 534.6 364 70.6
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 7.6e-150 534.3 366 68.3
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 7.6e-150 534.3 366 68.3
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 1.3e-149 533.5 363 68.9
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 2.9e-149 532.3 366 68.0
CAN.G86.12 Capsicum annuum HOM05D004198 ORTHO05D006470 2.9e-149 532.3 364 70.1
BraA03t15222Z Brassica rapa HOM05D004198 ORTHO05D006470 3.8e-149 531.9 369 68.3
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 3.8e-149 531.9 364 70.3
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 1.1e-148 530.4 394 65.7
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 1.4e-148 530.0 366 68.6
EL10Ac8g18951 Beta vulgaris HOM05D004198 ORTHO05D006470 1.4e-148 530.0 366 68.3
BolC7t46395H Brassica oleracea HOM05D004198 ORTHO05D006470 1.9e-148 529.6 362 67.4
CARHR241180 Cardamine hirsuta HOM05D004198 ORTHO05D006470 2.4e-148 529.3 366 68.0
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 4.2e-148 528.5 428 61.9
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 7.1e-148 527.7 366 68.3
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 9.3e-148 527.3 366 69.4
AL7G18410 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 1.6e-147 526.6 366 67.2
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 1.6e-147 526.6 363 70.5
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 2.7e-147 525.8 363 67.2
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 7.8e-147 524.2 366 69.1
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 3.9e-146 521.9 366 67.8
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 6.6e-146 521.2 345 72.5
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 1.1e-145 520.4 443 60.3
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 6.2e-144 514.6 364 67.9
Carub.0007s0731 Capsella rubella HOM05D004198 ORTHO05D006470 1.4e-143 513.5 383 63.7
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 1.2e-142 510.4 363 66.9
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 7.6e-142 507.7 366 67.8
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 1.2e-139 500.4 368 64.9
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 6.0e-139 498.0 340 69.1
CDE05G0881 Ceratophyllum demersum HOM05D004198 ORTHO05D006470 2.5e-137 492.7 359 65.2
BraA03t15221Z Brassica rapa HOM05D004198 ORTHO05D006470 1.6e-136 490.0 379 63.3
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 3.4e-134 482.3 361 64.5
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 3.2e-132 475.7 363 63.1
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 2.6e-118 429.5 369 56.6
PSO135G0878 Papaver somniferum HOM05D004198 ORTHO05D000955 2.1e-115 419.9 366 57.7
C07p59510 Brassica napus HOM05D004198 ORTHO05D006470 4.6e-115 418.7 366 56.8
SGA_v2.0_scaffold31G12701 Striga asiatica HOM05D004198 ORTHO05D006470 1.3e-109 400.6 366 58.5
BcaNung02155 Brassica carinata HOM05D004198 ORTHO05D006470 7.9e-107 391.3 366 53.6
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 4.4e-105 385.6 362 53.3
PGSC0003DMG400002301 Solanum tuberosum HOM05D004198 ORTHO05D006470 2.0e-102 376.7 270 68.9
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 8.5e-101 371.3 364 51.6
PSO724G0393 Papaver somniferum HOM05D004198 ORTHO05D006470 2.8e-72 276.6 182 68.1
A03p61840 Brassica napus HOM05D004198 ORTHO05D006470 1.4e-71 274.2 183 70.5
COL.COLO4_21183 Corchorus olitorius HOM05D004198 ORTHO05D006470 9.2e-71 271.6 198 67.7
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 2.3e-66 256.9 157 79.6
Haze_26708 Corylus avellana HOM05D004198 ORTHO05D006470 1.4e-63 247.7 432 35.2
DCAR_000446 Daucus carota HOM05D004198 ORTHO05D006470 1.3e-61 241.1 201 62.2
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 7.3e-60 235.3 167 62.3
SEGI_06318 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 1.2e-57 228.0 149 73.2
Potri.006G134450 Populus trichocarpa HOM05D004198 ORTHO05D006470 2.0e-57 227.3 155 71.0
Sopen07g006480 Solanum pennellii HOM05D004198 ORTHO05D006470 4.4e-57 226.1 158 72.2
FAN26G1461 Fragaria x ananassa HOM05D004198 ORTHO05D006470 9.5e-52 208.4 131 75.6
SEGI_05824 Sequoiadendron giganteum HOM05D004198 ORTHO05D043385 1.2e-25 121.7 83 65.1
RcHm_v2.0_Chr2g0121241 Rosa chinensis HOM05D004198 ORTHO05D347069 1.9e-23 114.4 81 65.4
PSO724G0241 Papaver somniferum HOM05D004198 ORTHO05D006470 5.4e-23 112.8 70 75.7
RcHm_v2.0_Chr2g0169891 Rosa chinensis HOM05D004198 ORTHO05D340468 5.1e-21 106.3 80 62.5
ATR0721G130 Amborella trichopoda HOM05D004198 ORTHO05D006470 6.7e-21 105.9 73 64.4
RcHm_v2.0_Chr2g0169881 Rosa chinensis HOM05D004198 ORTHO05D006470 1.3e-19 101.7 79 63.3
RcHm_v2.0_Chr2g0121231 Rosa chinensis HOM05D004198 ORTHO05D006470 6.2e-19 99.4 79 62.0
SEGI_37264 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 1.1e-18 98.6 85 54.1
SEGI_08338 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 1.4e-15 88.2 73 56.2
EL10Ac4g10130 Beta vulgaris HOM05D001013 ORTHO05D004597 9.3e-15 85.5 87 46.0
CANSAT25G3628 Cannabis sativa HOM05D004198 ORTHO05D043385 1.3e-13 81.6 58 56.9
EL10Ac4g10158 Beta vulgaris HOM05D001013 ORTHO05D016001 2.5e-12 77.4 60 55.0
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 4.0e-10 70.1 71 52.1
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 2.5e-07 60.8 65 49.2


User provided reference genes

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