Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G008600 Theobroma cacao HOM05D004578 ORTHO05D005529 1.5e-247 859.0 412 100.0
Duzib168G2341 Durio zibethinus HOM05D004578 ORTHO05D005529 5.0e-219 764.2 412 86.7
COL.COLO4_19019 Corchorus olitorius HOM05D004578 ORTHO05D005529 5.4e-213 744.2 408 85.8
Gorai.010G121600 Gossypium raimondii HOM05D004578 ORTHO05D005529 6.0e-196 687.6 412 77.9
Gohir.D06G107000 Gossypium hirsutum HOM05D004578 ORTHO05D005529 1.6e-193 679.5 411 77.4
Gohir.A06G104800 Gossypium hirsutum HOM05D004578 ORTHO05D005529 6.2e-193 677.6 412 76.7
Potri.018G008700 Populus trichocarpa HOM05D004578 ORTHO05D005529 1.2e-188 663.3 404 76.5
Sabra18G0013200 Salix brachista HOM05D004578 ORTHO05D005529 1.9e-186 656.0 404 76.0
Sabra18G0015700 Salix brachista HOM05D004578 ORTHO05D005529 1.9e-186 656.0 404 76.0
Ciclev10008459m.g Citrus clementina HOM05D004578 ORTHO05D005529 4.8e-185 651.4 406 73.9
Sabra06G0211200 Salix brachista HOM05D004578 ORTHO05D005529 2.6e-183 645.6 404 74.5
Ciclev10008463m.g Citrus clementina HOM05D004578 ORTHO05D005529 9.9e-183 643.7 406 73.9
TWI32G0020 Tripterygium wilfordii HOM05D004578 ORTHO05D005529 2.2e-182 642.5 402 74.4
MD08G1126500 Malus domestica HOM05D004578 ORTHO05D005529 6.4e-182 641.0 400 74.8
Cfa013287 Carpinus fangiana HOM05D004578 ORTHO05D005529 2.4e-181 639.0 401 75.1
QL12p025440 Quercus lobata HOM05D004578 ORTHO05D005529 2.4e-181 639.0 400 73.0
Prupe.1G458600 Prunus persica HOM05D004578 ORTHO05D005529 1.2e-180 636.7 400 73.8
Manes.16G134500 Manihot esculenta HOM05D004578 ORTHO05D005529 2.7e-180 635.6 405 72.3
Haze_21761 Corylus avellana HOM05D004578 ORTHO05D005529 6.0e-180 634.4 401 74.8
MD15G1106400 Malus domestica HOM05D004578 ORTHO05D005529 1.0e-179 633.6 400 73.2
CiPaw.07G211300 Carya illinoinensis HOM05D004578 ORTHO05D005529 8.7e-179 630.6 401 73.8
FAN27G0985 Fragaria x ananassa HOM05D004578 ORTHO05D005529 3.3e-178 628.6 395 73.4
Cfa013284 Carpinus fangiana HOM05D004578 ORTHO05D005529 5.6e-178 627.9 401 73.6
Cpa.g.sc23.31 Carica papaya HOM05D004578 ORTHO05D005529 2.8e-177 625.5 404 72.0
FAN15G2443 Fragaria x ananassa HOM05D004578 ORTHO05D005529 4.8e-177 624.8 395 72.9
Prupe.1G458900 Prunus persica HOM05D004578 ORTHO05D005529 6.2e-177 624.4 407 72.0
Potri.006G272800 Populus trichocarpa HOM05D004578 ORTHO05D005529 1.4e-176 623.2 399 72.7
FvH4_2g36660 Fragaria vesca HOM05D004578 ORTHO05D005529 9.0e-176 620.5 395 72.4
Manes.03G004800 Manihot esculenta HOM05D004578 ORTHO05D005529 1.5e-175 619.8 406 69.5
FAN20G1103 Fragaria x ananassa HOM05D004578 ORTHO05D005529 2.0e-175 619.4 395 71.9
CANSAT25G1430 Cannabis sativa HOM05D004578 ORTHO05D005529 1.3e-174 616.7 404 70.5
BolC4t26970H Brassica oleracea HOM05D004578 ORTHO05D005529 1.7e-174 616.3 415 70.6
A04p18950 Brassica napus HOM05D004578 ORTHO05D005529 2.2e-174 615.9 415 70.6
Sp4g03570 Schrenkiella parvula HOM05D004578 ORTHO05D005529 2.9e-174 615.5 408 70.6
BraA04t17495Z Brassica rapa HOM05D004578 ORTHO05D005529 3.8e-174 615.1 415 70.6
BcaC02g08438 Brassica carinata HOM05D004578 ORTHO05D005529 4.9e-174 614.8 415 70.4
C04p54190 Brassica napus HOM05D004578 ORTHO05D005529 4.9e-174 614.8 415 70.4
Atru.chr7.2661 Acer truncatum HOM05D004578 ORTHO05D005529 8.4e-174 614.0 410 71.2
QL12p025516 Quercus lobata HOM05D004578 ORTHO05D005529 1.1e-173 613.6 399 70.9
CARHR117360 Cardamine hirsuta HOM05D004578 ORTHO05D005529 2.5e-173 612.5 409 70.7
BcaB06g27986 Brassica carinata HOM05D004578 ORTHO05D005529 3.2e-173 612.1 408 70.8
AL4G15160 Arabidopsis lyrata HOM05D004578 ORTHO05D005529 4.2e-173 611.7 407 70.5
AT2G24580 Arabidopsis thaliana HOM05D004578 ORTHO05D005529 7.1e-173 610.9 408 70.1
CiPaw.08G020700 Carya illinoinensis HOM05D004578 ORTHO05D005529 2.1e-172 609.4 400 72.0
Carub.0004s0400 Capsella rubella HOM05D004578 ORTHO05D005529 2.7e-172 609.0 408 69.9
Thhalv10000150m.g Eutrema salsugineum HOM05D004578 ORTHO05D005529 7.9e-172 607.4 416 68.8
Eucgr.C04012 Eucalyptus grandis HOM05D004578 ORTHO05D005529 1.0e-171 607.1 409 69.9
TAR625G0669 Trochodendron aralioides HOM05D004578 ORTHO05D005529 2.3e-171 605.9 404 68.3
ClCG05G026450 Citrullus lanatus HOM05D004578 ORTHO05D005529 8.7e-171 604.0 405 70.4
Aa31sc160G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 2.5e-170 602.4 406 69.0
THA.LOC104819936 Tarenaya hassleriana HOM05D004578 ORTHO05D005529 7.4e-170 600.9 410 68.8
Aa31sc715G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 4.8e-169 598.2 406 69.5
Cfa013283 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.2e-167 593.6 384 72.1
MELO3C003620.2 Cucumis melo HOM05D004578 ORTHO05D005529 3.4e-167 592.0 408 67.6
Dinv04517 Davidia involucrata HOM05D004578 ORTHO05D005529 3.4e-167 592.0 413 67.6
RcHm_v2.0_Chr6g0305131 Rosa chinensis HOM05D004578 ORTHO05D005529 5.5e-165 584.7 394 69.0
Nn8g40733 Nelumbo nucifera HOM05D004578 ORTHO05D005529 7.1e-165 584.3 405 67.2
PSO170G4894 Papaver somniferum HOM05D004578 ORTHO05D005529 1.2e-164 583.6 407 64.9
PSO063G3790 Papaver somniferum HOM05D004578 ORTHO05D005529 1.6e-164 583.2 409 64.3
CSS0030954 Camellia sinensis var. sinensis HOM05D004578 ORTHO05D005529 6.1e-164 581.3 407 65.4
Sed0023873 Sechium edule HOM05D004578 ORTHO05D005529 8.7e-163 577.4 407 68.3
CsaV3_3G047160 Cucumis sativus L. HOM05D004578 ORTHO05D005529 1.9e-162 576.2 408 65.9
PGR044G1507 Punica granatum HOM05D004578 ORTHO05D005529 9.7e-162 573.9 399 66.9
Peaxi162Scf00045g01734 Petunia axillaris HOM05D004578 ORTHO05D005529 1.6e-161 573.2 411 63.5
MBI16_g05839_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 8.2e-161 570.9 406 64.5
Aqoxy7G02848 Aquilegia oxysepala HOM05D004578 ORTHO05D005529 1.4e-160 570.1 404 65.3
Actinidia06432 Actinidia chinensis HOM05D004578 ORTHO05D005529 6.9e-160 567.8 415 63.9
DCAR_000687 Daucus carota HOM05D004578 ORTHO05D005529 6.9e-160 567.8 410 62.7
vmacro18918 Vaccinium macrocarpon HOM05D004578 ORTHO05D005529 1.2e-159 567.0 414 64.0
Nitab4.5_0000555g0200 Nicotiana tabacum HOM05D004578 ORTHO05D005529 2.6e-159 565.8 404 64.9
BcaC02g08437 Brassica carinata HOM05D004578 ORTHO05D005529 1.0e-158 563.9 414 65.9
Cc08_g06480 Coffea canephora HOM05D004578 ORTHO05D005529 6.5e-158 561.2 399 64.7
CAN.G673.19 Capsicum annuum HOM05D004578 ORTHO05D005529 8.5e-158 560.8 404 63.1
Prupe.1G458800 Prunus persica HOM05D004578 ORTHO05D005529 2.1e-156 556.2 403 67.0
Lj7P748T39 Lonicera japonica HOM05D004578 ORTHO05D005529 2.7e-156 555.8 390 65.6
TPR.G12360 Trifolium pratense HOM05D004578 ORTHO05D005529 7.9e-156 554.3 391 65.0
Rhsim10G0084800 Rhododendron simsii HOM05D004578 ORTHO05D005529 2.3e-155 552.7 398 64.6
Ca_15651_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 1.1e-154 550.4 383 66.3
Ca_15659_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 1.1e-154 550.4 383 66.3
Medtr3g108990 Medicago truncatula HOM05D004578 ORTHO05D005529 1.1e-154 550.4 384 65.1
Eucgr.C04016 Eucalyptus grandis HOM05D004578 ORTHO05D005529 2.0e-154 549.7 389 64.8
TAR383G0560 Trochodendron aralioides HOM05D004578 ORTHO05D005529 3.3e-154 548.9 393 63.6
Hund13109 Selenicereus undatus HOM05D004578 ORTHO05D005529 1.3e-153 547.0 409 61.9
Nitab4.5_0004131g0050 Nicotiana tabacum HOM05D004578 ORTHO05D005529 1.7e-153 546.6 387 64.6
TAR383G1032 Trochodendron aralioides HOM05D004578 ORTHO05D005529 2.2e-153 546.2 393 63.1
Solyc08g006430.4 Solanum lycopersicum HOM05D004578 ORTHO05D005529 2.8e-153 545.8 401 61.8
Migut.A00428 Erythranthe guttata HOM05D004578 ORTHO05D005529 6.3e-153 544.7 398 63.6
Medtr3g109010 Medicago truncatula HOM05D004578 ORTHO05D005529 6.3e-153 544.7 390 64.6
arahy.Tifrunner.gnm1.ann1.W2ETIH Arachis hypogaea HOM05D004578 ORTHO05D005529 1.8e-152 543.1 391 65.2
Eucgr.C04014 Eucalyptus grandis HOM05D004578 ORTHO05D005529 1.8e-152 543.1 387 64.9
Glyma.04G076300 Glycine max HOM05D004578 ORTHO05D005529 2.4e-152 542.7 388 63.9
arahy.Tifrunner.gnm1.ann1.M0AD1K Arachis hypogaea HOM05D004578 ORTHO05D005529 4.1e-152 542.0 391 64.7
PGSC0003DMG400026320 Solanum tuberosum HOM05D004578 ORTHO05D005529 1.2e-151 540.4 397 61.7
Lsat_1_v5_gn_9_4341 Lactuca sativa HOM05D004578 ORTHO05D005529 2.0e-151 539.7 413 62.0
Sopen08g002370 Solanum pennellii HOM05D004578 ORTHO05D005529 3.4e-151 538.9 399 60.4
VMungo1309G1783 Vigna mungo HOM05D004578 ORTHO05D005529 1.3e-150 537.0 384 64.6
SalBow4G0906 Salvia bowleyana HOM05D004578 ORTHO05D005529 3.8e-150 535.4 399 61.9
Lj1g0024454 Lotus japonicus HOM05D004578 ORTHO05D005529 5.5e-149 531.6 384 63.5
Cc00_g13120 Coffea canephora HOM05D004578 ORTHO05D005529 9.4e-149 530.8 397 62.5
Phvul.009G102000 Phaseolus vulgaris HOM05D004578 ORTHO05D005529 9.4e-149 530.8 384 63.5
AUR62020290 Chenopodium quinoa HOM05D004578 ORTHO05D005529 1.2e-148 530.4 398 62.1
HanXRQChr15g0466441 Helianthus annuus HOM05D004578 ORTHO05D005529 4.7e-148 528.5 414 59.9
AUR62037713 Chenopodium quinoa HOM05D004578 ORTHO05D005529 7.9e-148 527.7 398 61.6
MBI13_g34048_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 3.9e-147 525.4 401 60.1
EL10Ac2g02417 Beta vulgaris HOM05D004578 ORTHO05D005529 1.1e-146 523.9 399 60.2
Ca_15652_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 4.4e-146 521.9 372 64.8
Ca_15660_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 4.4e-146 521.9 372 64.8
TPR.G12429 Trifolium pratense HOM05D004578 ORTHO05D005529 9.7e-146 520.8 384 62.5
Ah.13g067790 Amaranthus hybridus HOM05D004578 ORTHO05D005529 1.3e-145 520.4 400 62.0
MSTRG.25795 Avicennia marina HOM05D004578 ORTHO05D005529 1.7e-145 520.0 405 60.0
ECA247G3559 Erigeron canadensis HOM05D004578 ORTHO05D005529 2.2e-145 519.6 415 60.0
SGA_v2.0_scaffold193G40672 Striga asiatica HOM05D004578 ORTHO05D005529 2.2e-145 519.6 400 61.5
Psat5g024080 Pisum sativum HOM05D004578 ORTHO05D005529 2.4e-144 516.2 384 60.4
HanXRQChr10g0282951 Helianthus annuus HOM05D004578 ORTHO05D005529 2.7e-140 502.7 416 57.5
Sc07g0007360 Simmondsia chinensis HOM05D004578 ORTHO05D005529 6.1e-140 501.5 394 57.9
CDE02G4459 Ceratophyllum demersum HOM05D004578 ORTHO05D005529 9.7e-138 494.2 388 58.5
Actinidia22261 Actinidia chinensis HOM05D004578 ORTHO05D005529 5.9e-135 485.0 415 58.1
ATR0626G173 Amborella trichopoda HOM05D004578 ORTHO05D005529 1.2e-132 477.2 403 57.6
unitig_32.g11237 Utricularia gibba HOM05D004578 ORTHO05D005529 3.0e-131 472.6 392 57.9
Lalb_Chr11g0064181 Lupinus albus HOM05D004578 ORTHO05D005529 2.8e-129 466.1 388 56.4
SEGI_31206 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 2.0e-127 459.9 415 52.5
Os09g0498500 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 2.6e-122 443.0 409 52.8
SEGI_11947 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 1.3e-121 440.7 414 51.4
Zm00001eb317190 Zea mays HOM05D004578 ORTHO05D005529 1.5e-117 427.2 406 50.7
Zm00001eb127180 Zea mays HOM05D004578 ORTHO05D005529 8.0e-116 421.4 398 52.8
Gohir.D06G106866 Gossypium hirsutum HOM05D004578 ORTHO05D005529 6.8e-115 418.3 412 55.1
Os01g0316100 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 4.6e-111 405.6 400 51.0
Os12g0543600 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 9.5e-109 397.9 375 51.7
Mapoly0152s0014 Marchantia polymorpha HOM05D004578 ORTHO05D005529 1.8e-107 393.7 400 47.5
Zm00001eb340420 Zea mays HOM05D004578 ORTHO05D005529 2.0e-106 390.2 391 50.6
Pp3c9_3640 Physcomitrium patens HOM05D004578 ORTHO05D005529 1.1e-104 384.4 410 47.8
Gorai.010G121400 Gossypium raimondii HOM05D004578 ORTHO05D005529 4.6e-103 379.0 412 49.0
SMO115G0125 Selaginella moellendorffii HOM05D004578 ORTHO05D005529 2.1e-100 370.2 415 43.9
AagrBONN_evm.TU.Sc2ySwM_368.3376 Anthoceros agrestis HOM05D004578 ORTHO05D005529 5.2e-99 365.5 398 47.0
Zm00001eb140430 Zea mays HOM05D004578 ORTHO05D005529 1.5e-98 364.0 414 46.9
Psat5g025320 Pisum sativum HOM05D004578 ORTHO05D005529 7.6e-90 335.1 253 60.5
Oeu018556.1 Olea europaea HOM05D004578 ORTHO05D005529 6.2e-84 315.5 397 43.6
GSVIVG01033177001 Vitis vinifera HOM05D004578 ORTHO05D005529 1.5e-82 310.8 404 43.6
Oeu008773.1 Olea europaea HOM05D004578 ORTHO05D005529 4.2e-80 302.8 397 43.1
Hma1.2p1_1588F.1_g292320 Hydrangea macrophylla HOM05D004578 ORTHO05D005529 1.0e-78 298.1 410 42.9
Cfa013285 Carpinus fangiana HOM05D004578 ORTHO05D005529 3.6e-76 289.7 227 62.1
HPP92_017393 Vanilla planifolia HOM05D004578 ORTHO05D005529 1.1e-75 288.1 395 40.3
unitig_32.g11239 Utricularia gibba HOM05D004578 ORTHO05D005529 2.7e-63 246.9 186 60.8
Lalb_Chr23g0269171 Lupinus albus HOM05D004578 ORTHO05D005529 3.3e-61 240.0 156 69.2
PRCOL_00000645 Prasinoderma coloniale HOM05D004578 ORTHO05D005529 1.1e-59 235.0 428 34.1
HanXRQChr10g0282961 Helianthus annuus HOM05D004578 ORTHO05D005529 9.0e-43 178.7 154 53.2
Cc08_g06580 Coffea canephora HOM05D004578 ORTHO05D005529 2.6e-34 150.6 120 60.0
Ca_28680_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 2.9e-33 147.1 393 28.5
Actinidia22262 Actinidia chinensis HOM05D004578 ORTHO05D005529 4.2e-32 143.3 318 28.9
unitig_32.g11238 Utricularia gibba HOM05D004578 ORTHO05D005529 2.7e-31 140.6 96 71.9
TPR.G12332 Trifolium pratense HOM05D004578 ORTHO05D005529 5.9e-26 122.9 78 69.2
Cre12.g493500 Chlamydomonas reinhardtii HOM05D004578 ORTHO05D005529 2.8e-20 104.0 406 27.3
COL.COLO4_30024 Corchorus olitorius HOM05D004578 ORTHO05D005529 1.4e-11 75.1 40 87.5
Psat0s2347g0040 Pisum sativum HOM05D004578 ORTHO05D005529 1.7e-09 68.2 60 53.3
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 5.0e-09 66.6 47 59.6
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.5e-08 64.3 222 24.3
VMungo1041G0001 Vigna mungo HOM05D004578 ORTHO05D005529 1.4e-06 58.5 42 71.4


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