Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 6.4e-266 920.2 478 100.0
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 2.3e-215 752.3 480 83.5
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 3.2e-185 652.1 479 73.1
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 3.6e-184 648.7 479 72.9
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 2.0e-182 642.9 456 74.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 4.7e-160 568.5 433 71.4
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.3e-146 523.9 469 59.3
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 7.6e-142 508.1 481 58.8
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 8.4e-141 504.6 464 60.3
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 2.4e-140 503.1 470 58.3
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 6.6e-138 495.0 474 57.6
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 7.3e-137 491.5 459 58.0
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 5.2e-135 485.3 459 56.6
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 8.9e-135 484.6 475 56.8
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 2.2e-133 479.9 468 57.5
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 4.9e-133 478.8 462 57.6
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.2e-131 474.2 466 56.9
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 1.3e-130 470.7 468 55.1
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 3.0e-130 469.5 458 57.6
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.1e-129 467.6 458 55.5
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 6.9e-127 458.4 464 57.3
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 6.9e-127 458.4 473 54.5
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.2e-125 453.4 460 56.7
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 3.9e-122 442.6 466 54.3
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.3e-121 439.1 474 53.8
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 6.2e-120 435.3 478 52.5
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.8e-119 433.7 460 55.2
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 3.1e-119 433.0 408 57.4
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.1e-119 433.0 476 53.6
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 2.0e-118 430.3 467 53.1
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.6e-118 429.9 469 53.7
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 4.9e-117 425.6 446 53.6
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 4.9e-117 425.6 473 50.3
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.4e-116 424.1 447 55.0
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 3.0e-114 416.4 491 51.1
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 4.3e-113 412.5 471 50.3
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 7.4e-113 411.8 467 49.3
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 7.4e-113 411.8 449 53.9
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 2.1e-112 410.2 469 50.3
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 1.8e-111 407.1 472 50.0
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 3.4e-110 402.9 464 49.6
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 7.6e-110 401.7 482 48.3
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.3e-109 401.0 488 48.8
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 2.9e-109 399.8 487 49.3
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 2.9e-109 399.8 480 49.0
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 2.9e-109 399.8 408 54.2
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 4.9e-109 399.1 466 49.1
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.1e-108 397.9 480 49.2
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.9e-108 397.1 343 60.6
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 4.2e-108 396.0 462 49.8
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 5.5e-108 395.6 477 48.8
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 5.5e-108 395.6 481 48.2
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 9.3e-108 394.8 482 49.2
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 9.3e-108 394.8 473 47.1
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.2e-107 394.4 469 47.8
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 1.6e-107 394.0 476 49.2
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.1e-107 393.7 473 46.5
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 1.0e-106 391.3 480 47.1
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 1.0e-106 391.3 469 49.9
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 3.0e-106 389.8 459 49.0
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 3.0e-106 389.8 468 47.4
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 5.1e-106 389.0 476 48.5
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 8.7e-106 388.3 472 48.1
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.1e-105 387.9 474 47.0
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 2.5e-105 386.7 480 48.3
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 5.7e-105 385.6 480 48.3
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 7.4e-105 385.2 471 47.8
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 9.6e-105 384.8 490 46.3
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.6e-104 384.0 480 47.9
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 8.2e-104 381.7 482 47.9
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 1.8e-103 380.6 473 47.1
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 4.1e-103 379.4 440 48.9
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 4.1e-103 379.4 461 48.4
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 4.1e-103 379.4 471 46.7
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 9.0e-103 378.3 458 49.1
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 2.0e-102 377.1 465 47.7
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 2.6e-102 376.7 457 48.6
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.4e-100 370.9 470 48.9
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.9e-100 370.5 330 59.1
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.2e-99 367.9 507 45.6
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.3e-98 364.4 480 46.2
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 1.9e-97 360.5 469 46.1
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.2e-96 357.1 428 46.5
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 3.7e-96 356.3 465 47.3
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 1.8e-95 354.0 467 43.9
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 3.1e-95 353.2 469 43.3
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 6.9e-95 352.1 338 58.9
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.0e-90 338.2 443 47.2
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 1.8e-90 337.4 458 46.1
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 3.0e-90 336.7 459 45.1
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 3.3e-89 333.2 452 43.6
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 8.2e-88 328.6 460 42.6
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 4.1e-87 326.2 301 59.1
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.1e-75 287.3 302 54.6
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 4.7e-75 286.2 469 40.5
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.5e-68 264.6 328 47.3
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.8e-66 257.7 457 38.1
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.4e-55 221.5 323 41.5
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 2.9e-48 197.2 182 56.0
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 6.6e-45 186.0 366 37.4
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 1.3e-32 145.2 224 42.4
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 1.9e-31 141.4 157 46.5
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 9.5e-28 129.0 131 49.6
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 2.8e-27 127.5 198 41.9
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 8.1e-27 125.9 131 48.9
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 8.1e-27 125.9 131 48.9
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 2.6e-25 120.9 163 36.2
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 2.6e-25 120.9 163 36.2
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 1.3e-24 118.6 138 46.4
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.3e-21 108.6 255 29.8
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-21 108.2 119 47.1
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-21 108.2 128 46.9
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 5.1e-21 106.7 493 25.6
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.4e-17 94.0 85 61.2
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 3.2e-15 87.4 414 25.8
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 4.2e-15 87.0 411 25.1
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.5e-12 78.6 428 24.1
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 1.9e-12 78.2 78 51.3
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 6.2e-11 73.2 55 63.6
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.4e-10 72.0 120 36.7
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.2e-08 64.7 115 35.7
RcHm_v2.0_Chr3g0477111 Rosa chinensis HOM05D006143 ORTHO05D007587 8.4e-08 62.8 36 80.6
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 1.6e-06 58.5 64 50.0
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 1.6e-06 58.5 97 35.1
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.6e-06 57.0 112 33.9


User provided reference genes

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