Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G094500 Theobroma cacao HOM05D000983 ORTHO05D010430 2.5e-75 285.4 149 100.0
COL.COLO4_07022 Corchorus olitorius HOM05D000983 ORTHO05D010430 1.6e-53 213.0 148 75.7
Duzib147G1261 Durio zibethinus HOM05D000983 ORTHO05D010430 1.1e-51 206.8 148 75.0
Gohir.D11G077200 Gossypium hirsutum HOM05D000983 ORTHO05D010430 4.9e-47 191.4 148 68.9
Gorai.007G082900 Gossypium raimondii HOM05D000983 ORTHO05D010430 6.4e-47 191.0 148 68.9
Gohir.A11G072900 Gossypium hirsutum HOM05D000983 ORTHO05D010430 9.2e-46 187.2 148 67.6
RcHm_v2.0_Chr2g0165911 Rosa chinensis HOM05D000983 ORTHO05D010430 2.4e-25 119.4 116 57.8
MD09G1066000 Malus domestica HOM05D000983 ORTHO05D010430 1.2e-24 117.1 120 55.0
Dinv34946 Davidia involucrata HOM05D000983 ORTHO05D010430 1.5e-24 116.7 109 60.6
FvH4_6g46930 Fragaria vesca HOM05D000983 ORTHO05D010430 7.6e-24 114.4 116 55.2
Prupe.3G255500 Prunus persica HOM05D000983 ORTHO05D010430 7.6e-24 114.4 111 56.8
Sed0002131 Sechium edule HOM05D000983 ORTHO05D010430 9.9e-24 114.0 138 46.4
FAN05G2519 Fragaria x ananassa HOM05D005508 ORTHO05D010430 1.3e-23 113.6 116 56.0
MELO3C019036.2 Cucumis melo HOM05D000983 ORTHO05D010430 3.8e-23 112.1 144 44.4
CsaV3_4G009250 Cucumis sativus L. HOM05D000983 ORTHO05D010430 4.9e-23 111.7 137 46.0
FAN09G0106 Fragaria x ananassa HOM05D000983 ORTHO05D010430 4.9e-23 111.7 116 54.3
Potri.017G093200 Populus trichocarpa HOM05D000983 ORTHO05D010430 8.4e-23 110.9 148 44.6
CSS0011859 Camellia sinensis var. sinensis HOM05D000983 ORTHO05D010430 1.2e-21 107.1 116 52.6
MD17G1058700 Malus domestica HOM05D000983 ORTHO05D010430 1.6e-21 106.7 116 50.9
Sabra17G0082200 Salix brachista HOM05D000983 ORTHO05D010430 1.6e-21 106.7 106 56.6
TAR371G0359 Trochodendron aralioides HOM05D000983 ORTHO05D010430 3.5e-21 105.5 140 48.6
GSVIVG01032922001 Vitis vinifera HOM05D000983 ORTHO05D010430 3.5e-21 105.5 141 47.5
Peaxi162Scf00991g00317 Petunia axillaris HOM05D000983 ORTHO05D010430 3.0e-20 102.4 110 45.5
Nitab4.5_0000212g0220 Nicotiana tabacum HOM05D000983 ORTHO05D010430 3.9e-20 102.1 143 42.7
Nitab4.5_0005916g0040 Nicotiana tabacum HOM05D000983 ORTHO05D010430 3.9e-20 102.1 111 45.9
Cc07_g04160 Coffea canephora HOM05D000983 ORTHO05D010430 6.6e-20 101.3 134 48.5
CANSAT64G1729 Cannabis sativa HOM05D000983 ORTHO05D010430 1.1e-19 100.5 151 45.7
Cpa.g.sc14.168 Carica papaya HOM05D000983 ORTHO05D010430 1.9e-19 99.8 141 46.8
FAN14G5804 Fragaria x ananassa HOM05D005508 ORTHO05D010430 2.5e-19 99.4 89 59.6
ClCG07G007430 Citrullus lanatus HOM05D000983 ORTHO05D010430 7.3e-19 97.8 144 38.9
FAN02G1587 Fragaria x ananassa HOM05D005508 ORTHO05D010430 7.3e-19 97.8 89 59.6
Glyma.08G244900 Glycine max HOM05D000983 ORTHO05D010430 8.1e-18 94.4 134 44.8
Lj1g0023223 Lotus japonicus HOM05D000983 ORTHO05D010430 8.1e-18 94.4 134 47.8
Phvul.008G033800 Phaseolus vulgaris HOM05D000983 ORTHO05D010430 8.1e-18 94.4 133 47.4
Psat3g201200 Pisum sativum HOM05D000983 ORTHO05D010430 1.1e-17 94.0 148 44.6
Medtr7g013300 Medicago truncatula HOM05D000983 ORTHO05D010430 3.4e-16 89.0 145 46.2
TPR.G33481 Trifolium pratense HOM05D000983 ORTHO05D010430 4.5e-16 88.6 148 41.2
VMungo1383G2848 Vigna mungo HOM05D000983 ORTHO05D010430 4.5e-16 88.6 133 44.4
Manes.02G054500 Manihot esculenta HOM05D000983 ORTHO05D010430 1.7e-15 86.7 116 45.7
Sopen02g016140 Solanum pennellii HOM05D000983 ORTHO05D010430 2.9e-15 85.9 96 45.8
Nn3g17429 Nelumbo nucifera HOM05D000983 ORTHO05D010430 3.8e-15 85.5 96 52.1
CAN.G398.16 Capsicum annuum HOM05D000983 ORTHO05D010430 6.4e-15 84.7 96 43.8
SalBow1G7705 Salvia bowleyana HOM05D000983 ORTHO05D010430 1.3e-12 77.0 116 38.8
CDE10G0096 Ceratophyllum demersum HOM05D000983 ORTHO05D010430 5.1e-12 75.1 91 47.3
Solyc02g066950.4 Solanum lycopersicum HOM05D000983 ORTHO05D010430 5.1e-12 75.1 76 50.0
Migut.H00630 Erythranthe guttata HOM05D000983 ORTHO05D010430 1.5e-11 73.6 108 44.4
Ca_04342_v3 Cicer arietinum L. HOM05D000983 ORTHO05D010430 4.3e-11 72.0 53 73.6
Ca_30588_v3 Cicer arietinum L. HOM05D000983 ORTHO05D010430 4.3e-11 72.0 53 73.6
arahy.Tifrunner.gnm1.ann1.3H63LQ Arachis hypogaea HOM05D000983 ORTHO05D010430 1.3e-10 70.5 95 49.5
arahy.Tifrunner.gnm1.ann1.GXCU2T Arachis hypogaea HOM05D000983 ORTHO05D010430 1.4e-09 67.0 95 47.4
DCAR_025428 Daucus carota HOM05D000983 ORTHO05D010430 4.9e-07 58.5 101 41.6


User provided reference genes

Program Settings