Gene: Sopen02g016140
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g016140
- Transcript Identifier Sopen02g016140.1
- Gene Type Coding gene
- Location Spenn-ch02 : 40320611-40332173 : positive
Gene Family Information
- ID HOM05D000983
- #Genes/#Species 613/99
- Phylogenetic origin
- ID ORTHO05D010430
- #Genes/#Species 63/51
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen02g016140.1
Descriptions
- Description Encodes a plastid-localized, #945, -amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms. | alpha-amylase-like 3 (AMY3) | FUNCTIONS IN: alpha-amylase activity | INVOLVED IN: circadian rhythm, starch catabolic process | LOCATED IN: chloroplast stroma, chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Glycosyl hydrolase, family 13, catalytic domain , Alpha-amylase, C-terminal beta-sheet | BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004556 | IEA | InterPro | alpha-amylase activity | |
| GO:0005509 | IEA | InterPro | calcium ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 3.2.3.3.1.1 | Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase |