Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G084900 Theobroma cacao HOM05D000042 ORTHO05D000028 6.5e-36 153.7 86 100.0
Duzib264G1044 Durio zibethinus HOM05D000042 ORTHO05D000028 1.2e-13 79.7 80 67.5
COL.COLO4_11687 Corchorus olitorius HOM05D000042 ORTHO05D000028 2.0e-13 79.0 80 68.8
Potri.002G109601 Populus trichocarpa HOM05D000042 ORTHO05D000028 7.7e-13 77.0 74 54.1
Nn1g05657 Nelumbo nucifera HOM05D000042 ORTHO05D000028 1.7e-12 75.9 74 51.4
Sabra02G0086300 Salix brachista HOM05D000042 ORTHO05D000028 3.8e-12 74.7 77 51.9
Actinidia16388 Actinidia chinensis HOM05D000042 ORTHO05D000028 5.0e-12 74.3 73 61.6
COL.COLO4_01055 Corchorus olitorius HOM05D000042 ORTHO05D000028 6.6e-12 73.9 81 65.4
Rhsim06G0069700 Rhododendron simsii HOM05D000042 ORTHO05D000028 8.6e-12 73.6 77 49.4
COL.COLO4_35302 Corchorus olitorius HOM05D000042 ORTHO05D000028 1.1e-11 73.2 73 52.1
Duzib116G0482 Durio zibethinus HOM05D000042 ORTHO05D000028 1.9e-11 72.4 77 49.4
MBI16_g07267_MAGBIO Magnolia biondii HOM05D000042 ORTHO05D000028 4.2e-11 71.2 77 48.1
Nitab4.5_0000354g0060 Nicotiana tabacum HOM05D000042 ORTHO05D000028 5.5e-11 70.9 78 55.1
Haze_22494 Corylus avellana HOM05D000042 ORTHO05D000028 1.2e-10 69.7 77 48.1
Potri.005G150501 Populus trichocarpa HOM05D000042 ORTHO05D000028 2.1e-10 68.9 74 63.5
Manes.05G187800 Manihot esculenta HOM05D000042 ORTHO05D000028 3.6e-10 68.2 77 50.6
Prupe.1G538800 Prunus persica HOM05D000042 ORTHO05D000028 4.7e-10 67.8 77 49.4
TAR628G1225 Trochodendron aralioides HOM05D000042 ORTHO05D000028 4.7e-10 67.8 77 46.8
Gorai.010G032600 Gossypium raimondii HOM05D000042 ORTHO05D000028 6.1e-10 67.4 77 48.1
RcHm_v2.0_Chr6g0269991 Rosa chinensis HOM05D000042 ORTHO05D000028 1.0e-09 66.6 77 50.6
Cc07_g07970 Coffea canephora HOM05D000042 ORTHO05D000028 1.4e-09 66.2 73 47.9
Gohir.A12G017200 Gossypium hirsutum HOM05D000042 ORTHO05D000028 2.3e-09 65.5 77 57.1
MD15G1389800 Malus domestica HOM05D000042 ORTHO05D000028 2.3e-09 65.5 77 61.0
Nitab4.5_0010043g0020 Nicotiana tabacum HOM05D000042 ORTHO05D000028 3.0e-09 65.1 73 47.9
Gohir.D06G029700 Gossypium hirsutum HOM05D000042 ORTHO05D000028 5.2e-09 64.3 77 46.8
vmacro04629 Vaccinium macrocarpon HOM05D000042 ORTHO05D000028 8.9e-09 63.5 74 59.5
FvH4_2g11352 Fragaria vesca HOM05D000042 ORTHO05D000028 1.5e-08 62.8 79 39.2
Oeu035069.1 Olea europaea HOM05D000042 ORTHO05D000028 1.5e-08 62.8 80 58.8
PGSC0003DMG400002039 Solanum tuberosum HOM05D000042 ORTHO05D000028 2.0e-08 62.4 76 53.9
Manes.18G057830 Manihot esculenta HOM05D000042 ORTHO05D000028 2.6e-08 62.0 77 44.2
Sopen04g030410 Solanum pennellii HOM05D000042 ORTHO05D000028 2.6e-08 62.0 73 43.8
FAN08G2306 Fragaria x ananassa HOM05D000042 ORTHO05D000028 3.4e-08 61.6 83 48.2
Rhsim05G0112200 Rhododendron simsii HOM05D000042 ORTHO05D000028 4.4e-08 61.2 76 36.8
arahy.Tifrunner.gnm1.ann1.61ZCUX Arachis hypogaea HOM05D000042 ORTHO05D000028 5.7e-08 60.8 72 61.1
Rhsim08G0088000 Rhododendron simsii HOM05D000042 ORTHO05D000028 9.8e-08 60.1 78 55.1
Peaxi162Scf00703g00011 Petunia axillaris HOM05D000042 ORTHO05D000028 1.3e-07 59.7 79 53.2
Atru.chr13.954 Acer truncatum HOM05D000042 ORTHO05D000028 1.7e-07 59.3 77 57.1
Haze_10443 Corylus avellana HOM05D000042 ORTHO05D000028 1.7e-07 59.3 77 50.6
ATR0800G120 Amborella trichopoda HOM05D000042 ORTHO05D000028 2.2e-07 58.9 80 41.2
CSS0003338 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 2.2e-07 58.9 76 56.6
Nitab4.5_0000885g0070 Nicotiana tabacum HOM05D000042 ORTHO05D000028 2.2e-07 58.9 78 52.6
ClCG10G009840 Citrullus lanatus HOM05D000042 ORTHO05D000028 4.9e-07 57.8 74 36.5
TAR381G0641 Trochodendron aralioides HOM05D000042 ORTHO05D000028 4.9e-07 57.8 77 55.8
CSS0007500 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 6.3e-07 57.4 76 56.6
PGR042G1523 Punica granatum HOM05D000042 ORTHO05D000028 6.3e-07 57.4 47 61.7
Duzib052G0797 Durio zibethinus HOM05D000042 ORTHO05D000028 8.3e-07 57.0 77 53.2
Migut.N02838 Erythranthe guttata HOM05D000042 ORTHO05D000028 8.3e-07 57.0 74 40.5
Lj2C430G5 Lonicera japonica HOM05D000042 ORTHO05D000028 8.3e-07 57.0 72 44.4
TWI56G0284 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 8.3e-07 57.0 47 55.3
Nitab4.5_0000514g0010 Nicotiana tabacum HOM05D000042 ORTHO05D000028 1.4e-06 56.2 74 54.1
TAR138G0002 Trochodendron aralioides HOM05D000042 ORTHO05D000028 1.4e-06 56.2 77 54.5
Gorai.007G058200 Gossypium raimondii HOM05D000042 ORTHO05D000028 1.8e-06 55.8 67 65.7
Gohir.A05G217000 Gossypium hirsutum HOM05D000042 ORTHO05D000028 2.4e-06 55.5 77 54.5
Nitab4.5_0003336g0080 Nicotiana tabacum HOM05D000042 ORTHO05D000028 2.4e-06 55.5 72 54.2
TAR625G0993 Trochodendron aralioides HOM05D000042 ORTHO05D000028 2.4e-06 55.5 77 53.2
CSS0006041 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 5.4e-06 54.3 74 39.2
CSS0006612 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 5.4e-06 54.3 74 39.2
CSS0030154 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 5.4e-06 54.3 74 39.2
CSS0035434 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 5.4e-06 54.3 74 39.2
Gohir.D05G220400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 5.4e-06 54.3 47 53.2
Gohir.D11G053400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 7.0e-06 53.9 67 64.2
Sc16g0000710 Simmondsia chinensis HOM05D000042 ORTHO05D000028 7.0e-06 53.9 78 41.0
CsaV3_3G048150 Cucumis sativus L. HOM05D000042 ORTHO05D000028 9.2e-06 53.5 77 36.4


User provided reference genes

Program Settings