Gene: COL.COLO4_35302
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_35302
- Transcript Identifier COL.rna33991
- Gene Type Coding gene
- Location AWUE01022526.1 : 72459-76215 : positive
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna33991
- GenBank OMO57534.1
- id gene35274
- gene_name COLO4_35302
- uniprot A0A1R3GHH6
Descriptions
- Description Transcription factor, K-box
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010440 | ISO | PLAZA Integrative Orthology | stomatal lineage progression | AT3G57230 |
| GO:0048574 | ISO | PLAZA Integrative Orthology | long-day photoperiodism, flowering | AT3G57230 |
| GO:0048578 | ISO | PLAZA Integrative Orthology | positive regulation of long-day photoperiodism, flowering | AT2G22630 |
| GO:0045944 | ISO | PLAZA Homology (enrichment) | positive regulation of transcription by RNA polymerase II | HOM05D000042 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D000042 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G22630 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT3G57230 |
| GO:0000977 | ISO | PLAZA Homology (enrichment) | RNA polymerase II transcription regulatory region sequence-specific DNA binding | HOM05D000042 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G57230 |
| GO:0046983 | ISO | PLAZA Homology (enrichment) | protein dimerization activity | HOM05D000042 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002487 | Transcription factor, K-box |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |