Gene: Potri.005G150501

General Information

Structural Information

Species Populus trichocarpa
Gene Identifier Potri.005G150501
Transcript Identifier Potri.005G150501.15
Gene Type Coding gene
Location Chr05 : 12859871-12873377 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000042
#Genes/#Species 4894/100
Phylogenetic origin

ID ORTHO05D000028
#Genes/#Species 3637/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id Potri.005G150501.v4.1
pacid 42805437

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR11945//PTHR11945:SF144//PTHR11945:SF184//PTHR11945:SF193 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0045944	IEA	InterPro	positive regulation of transcription by RNA polymerase II
GO:0010440	ISO	PLAZA Integrative Orthology	stomatal lineage progression	AT3G57230
GO:0048574	ISO	PLAZA Integrative Orthology	long-day photoperiodism, flowering	AT3G57230

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0046983	IEA	InterPro	protein dimerization activity
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0000977	IEA	InterPro	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0042803	ISO	PLAZA Integrative Orthology	protein homodimerization activity	AT3G57230
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G57230
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT3G57230

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	InterPro	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002100	Transcription factor, MADS-box
IPR036879	Transcription factor, MADS-box superfamily
IPR002487	Transcription factor, K-box
IPR033896	MADS MEF2-like

Mapman id	Description
15.5.14	RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)