Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G036000 Theobroma cacao HOM05D004035 ORTHO05D004631 7.1e-229 797.0 415 100.0
Duzib147G1708 Durio zibethinus HOM05D004035 ORTHO05D004631 6.9e-208 727.2 414 91.3
Thecc.01G133800 Theobroma cacao HOM05D004035 ORTHO05D004631 1.5e-207 726.1 414 91.1
Gohir.D11G190900 Gossypium hirsutum HOM05D004035 ORTHO05D004631 3.5e-204 714.9 414 89.9
Gorai.007G203400 Gossypium raimondii HOM05D004035 ORTHO05D004631 3.0e-203 711.8 414 89.6
Gohir.A11G184400 Gossypium hirsutum HOM05D004035 ORTHO05D004631 5.1e-203 711.1 414 89.4
COL.COLO4_22081 Corchorus olitorius HOM05D004035 ORTHO05D004631 2.5e-202 708.8 414 89.4
Atru.chr3.574 Acer truncatum HOM05D004035 ORTHO05D004631 1.5e-186 656.4 418 82.5
QL06p046086 Quercus lobata HOM05D004035 ORTHO05D004631 7.4e-186 654.1 419 82.3
Ciclev10024797m.g Citrus clementina HOM05D004035 ORTHO05D004631 2.2e-185 652.5 418 82.5
Gorai.003G015100 Gossypium raimondii HOM05D004035 ORTHO05D004631 4.1e-184 648.3 414 80.7
Manes.02G093700 Manihot esculenta HOM05D004035 ORTHO05D004631 2.0e-183 646.0 418 79.9
MD02G1147600 Malus domestica HOM05D004035 ORTHO05D004631 5.0e-182 641.3 416 78.8
Prupe.7G154500 Prunus persica HOM05D004035 ORTHO05D004631 1.4e-181 639.8 419 79.5
MD15G1261900 Malus domestica HOM05D004035 ORTHO05D004631 1.9e-181 639.4 416 79.3
Gohir.A02G165200 Gossypium hirsutum HOM05D004035 ORTHO05D004631 2.5e-181 639.0 414 80.2
TWI73G0243 Tripterygium wilfordii HOM05D004035 ORTHO05D004631 9.4e-181 637.1 418 79.2
CANSAT01G0227 Cannabis sativa HOM05D004035 ORTHO05D004631 1.8e-179 632.9 417 77.2
GSVIVG01018960001 Vitis vinifera HOM05D004035 ORTHO05D004631 3.3e-178 628.6 418 78.5
Potri.005G123000 Populus trichocarpa HOM05D004035 ORTHO05D004631 1.3e-177 626.7 418 78.7
Hma1.2p1_0400F.1_g144430 Hydrangea macrophylla HOM05D004035 ORTHO05D004631 1.2e-175 620.2 418 77.5
Potri.007G025700 Populus trichocarpa HOM05D004035 ORTHO05D004631 2.0e-175 619.4 417 77.0
arahy.Tifrunner.gnm1.ann1.GM6JEQ Arachis hypogaea HOM05D004035 ORTHO05D004631 7.7e-175 617.5 418 78.5
Cc03_g03620 Coffea canephora HOM05D004035 ORTHO05D004631 7.7e-175 617.5 417 76.3
arahy.Tifrunner.gnm1.ann1.6E6Z42 Arachis hypogaea HOM05D004035 ORTHO05D004631 1.7e-174 616.3 418 78.5
Gohir.D03G014800 Gossypium hirsutum HOM05D004035 ORTHO05D004631 1.7e-174 616.3 414 78.0
Actinidia12124 Actinidia chinensis HOM05D004035 ORTHO05D004631 2.5e-173 612.5 417 76.3
Sed0003321 Sechium edule HOM05D004035 ORTHO05D004631 3.2e-173 612.1 414 77.1
Glyma.11G068300 Glycine max HOM05D004035 ORTHO05D004631 4.2e-173 611.7 419 76.6
CSS0025574 Camellia sinensis var. sinensis HOM05D004035 ORTHO05D004631 9.4e-173 610.5 420 76.2
PGR102G3072 Punica granatum HOM05D004035 ORTHO05D004631 9.4e-173 610.5 430 75.1
MELO3C017565.2 Cucumis melo HOM05D004035 ORTHO05D004631 1.6e-172 609.8 414 77.5
ClCG07G009230 Citrullus lanatus HOM05D004035 ORTHO05D004631 3.6e-172 608.6 414 77.1
Glyma.01G176000 Glycine max HOM05D004035 ORTHO05D004631 3.6e-172 608.6 416 76.4
Lj2g0023524 Lotus japonicus HOM05D004035 ORTHO05D004631 6.1e-172 607.8 416 76.4
Lj2C453G20 Lonicera japonica HOM05D004035 ORTHO05D004631 1.8e-171 606.3 418 76.3
Phvul.002G030300 Phaseolus vulgaris HOM05D004035 ORTHO05D004631 3.0e-171 605.5 416 76.4
RcHm_v2.0_Chr2g0101581 Rosa chinensis HOM05D004035 ORTHO05D004631 1.5e-170 603.2 418 74.9
TAR376G0366 Trochodendron aralioides HOM05D004035 ORTHO05D004631 1.5e-170 603.2 417 75.8
Rhsim02G0182400 Rhododendron simsii HOM05D004035 ORTHO05D004631 9.7e-170 600.5 418 74.6
VMungo1215G2866 Vigna mungo HOM05D004035 ORTHO05D004631 2.2e-169 599.4 419 76.1
Sabra07G0022700 Salix brachista HOM05D004035 ORTHO05D004631 3.7e-169 598.6 417 75.1
HanXRQChr16g0530441 Helianthus annuus HOM05D004035 ORTHO05D004631 1.1e-168 597.0 421 74.6
CARHR244970 Cardamine hirsuta HOM05D004035 ORTHO05D004631 1.8e-168 596.3 418 73.0
Eucgr.H01269 Eucalyptus grandis HOM05D004035 ORTHO05D004631 2.4e-168 595.9 418 74.4
Actinidia36560 Actinidia chinensis HOM05D004035 ORTHO05D004631 3.1e-168 595.5 415 75.4
Sp7g34290 Schrenkiella parvula HOM05D004035 ORTHO05D004631 3.1e-168 595.5 418 73.2
Thhalv10024305m.g Eutrema salsugineum HOM05D004035 ORTHO05D004631 4.1e-168 595.1 418 73.2
Carub.0007s0370 Capsella rubella HOM05D004035 ORTHO05D004631 9.1e-168 594.0 418 73.2
A03p64370 Brassica napus HOM05D004035 ORTHO05D004631 1.2e-167 593.6 417 73.9
Ca_24847_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 1.2e-167 593.6 415 75.7
CAN.G1003.4 Capsicum annuum HOM05D004035 ORTHO05D004631 2.0e-167 592.8 417 75.3
FvH4_1g13311 Fragaria vesca HOM05D004035 ORTHO05D004631 3.5e-167 592.0 415 74.9
AL7G14420 Arabidopsis lyrata HOM05D004035 ORTHO05D004631 4.5e-167 591.7 418 72.7
Nitab4.5_0000178g0040 Nicotiana tabacum HOM05D004035 ORTHO05D004631 5.9e-167 591.3 417 75.1
BraA03t15502Z Brassica rapa HOM05D004035 ORTHO05D004631 7.7e-167 590.9 417 73.4
FAN19G0080 Fragaria x ananassa HOM05D004035 ORTHO05D004631 7.7e-167 590.9 416 75.0
BolC7t46602H Brassica oleracea HOM05D004035 ORTHO05D004631 1.0e-166 590.5 417 73.4
C07p61810 Brassica napus HOM05D004035 ORTHO05D004631 1.7e-166 589.7 417 73.4
FAN28G2497 Fragaria x ananassa HOM05D004035 ORTHO05D004631 1.7e-166 589.7 427 73.1
Medtr5g020140 Medicago truncatula HOM05D004035 ORTHO05D004631 1.7e-166 589.7 415 74.7
AT4G36630 Arabidopsis thaliana HOM05D004035 ORTHO05D004631 1.9e-165 586.3 418 72.2
Solyc07g056660.4 Solanum lycopersicum HOM05D004035 ORTHO05D004631 2.5e-165 585.9 417 73.9
Sopen07g030000 Solanum pennellii HOM05D004035 ORTHO05D004631 2.5e-165 585.9 417 73.9
Lalb_Chr09g0322391 Lupinus albus HOM05D004035 ORTHO05D004631 4.2e-165 585.1 414 74.6
Lalb_Chr16g0388281 Lupinus albus HOM05D004035 ORTHO05D004631 1.2e-164 583.6 419 74.0
Lsat_1_v5_gn_3_76401 Lactuca sativa HOM05D004035 ORTHO05D004631 1.6e-164 583.2 415 74.0
SGA_v2.0_scaffold276G46626 Striga asiatica HOM05D004035 ORTHO05D004631 2.1e-164 582.8 416 71.4
TPR.G22289 Trifolium pratense HOM05D004035 ORTHO05D004631 2.1e-164 582.8 415 74.5
Psat2g159680 Pisum sativum HOM05D004035 ORTHO05D004631 2.7e-164 582.4 415 75.2
LjContig00448g0016984 Lotus japonicus HOM05D004035 ORTHO05D004631 4.7e-164 581.6 417 74.6
FAN26G1872 Fragaria x ananassa HOM05D004035 ORTHO05D004631 1.0e-163 580.5 446 69.7
Lj1g0016074 Lotus japonicus HOM05D004035 ORTHO05D004631 1.0e-163 580.5 417 74.6
Sc03g0002970 Simmondsia chinensis HOM05D004035 ORTHO05D004631 2.3e-163 579.3 417 71.2
AUR62004050 Chenopodium quinoa HOM05D004035 ORTHO05D004631 4.0e-163 578.6 416 71.2
TPR.G34978 Trifolium pratense HOM05D004035 ORTHO05D004631 8.8e-163 577.4 417 73.1
Aa31LG6G13430 Aethionema arabicum HOM05D004035 ORTHO05D004631 1.1e-162 577.0 415 71.8
ECA246G3379 Erigeron canadensis HOM05D004035 ORTHO05D004631 4.4e-162 575.1 421 72.2
Migut.H00988 Erythranthe guttata HOM05D004035 ORTHO05D004631 7.5e-162 574.3 417 70.3
Sopen02g029920 Solanum pennellii HOM05D004035 ORTHO05D004631 1.3e-161 573.5 417 72.4
Solyc02g085220.4 Solanum lycopersicum HOM05D004035 ORTHO05D004631 4.8e-161 571.6 417 72.7
AUR62007565 Chenopodium quinoa HOM05D004035 ORTHO05D004631 6.3e-161 571.2 415 70.6
Psat4g092560 Pisum sativum HOM05D004035 ORTHO05D004631 1.1e-160 570.5 418 72.0
Cpa.g.sc1294.3 Carica papaya HOM05D004035 ORTHO05D004631 3.1e-160 568.9 366 81.4
CiPaw.01G038000 Carya illinoinensis HOM05D004035 ORTHO05D004631 2.0e-159 566.2 418 73.4
arahy.Tifrunner.gnm1.ann1.JC6DGE Arachis hypogaea HOM05D004035 ORTHO05D004631 1.0e-158 563.9 417 72.2
Cfa004306 Carpinus fangiana HOM05D004035 ORTHO05D004631 2.2e-158 562.8 417 73.4
EL10Ac6g15563 Beta vulgaris HOM05D004035 ORTHO05D004631 5.0e-158 561.6 415 69.6
Nn1g04984 Nelumbo nucifera HOM05D004035 ORTHO05D004631 1.9e-157 559.7 418 70.3
DCAR_017291 Daucus carota HOM05D004035 ORTHO05D004631 5.5e-157 558.1 428 69.4
Medtr8g077680 Medicago truncatula HOM05D004035 ORTHO05D004631 7.2e-157 557.8 418 71.1
arahy.Tifrunner.gnm1.ann1.ZDS5RA Arachis hypogaea HOM05D004035 ORTHO05D004631 3.6e-156 555.4 417 71.2
Ca_22279_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 6.1e-156 554.7 431 69.6
Ah.02g125200 Amaranthus hybridus HOM05D004035 ORTHO05D004631 1.0e-155 553.9 416 68.5
RcHm_v2.0_Chr2g0101101 Rosa chinensis HOM05D004035 ORTHO05D004631 2.7e-151 539.3 378 74.1
PSO675G4195 Papaver somniferum HOM05D004035 ORTHO05D004631 5.0e-150 535.0 417 65.7
PSO541G3635 Papaver somniferum HOM05D004035 ORTHO05D004631 6.5e-150 534.6 417 65.9
Dinv39986 Davidia involucrata HOM05D004035 ORTHO05D004631 1.6e-148 530.0 418 70.8
TAR362G0832 Trochodendron aralioides HOM05D004035 ORTHO05D004631 1.0e-147 527.3 420 66.2
ECA232G2840 Erigeron canadensis HOM05D004035 ORTHO05D004631 1.7e-145 520.0 423 66.7
C03p80030 Brassica napus HOM05D004035 ORTHO05D004631 4.9e-145 518.5 415 68.0
CsaV3_UNG172360 Cucumis sativus L. HOM05D004035 ORTHO05D004631 1.4e-144 516.9 362 77.9
Aqoxy6G01113 Aquilegia oxysepala HOM05D004035 ORTHO05D004631 5.9e-143 511.5 419 66.6
Nn7g37554 Nelumbo nucifera HOM05D004035 ORTHO05D004631 2.9e-142 509.2 413 64.9
Peaxi162Scf00366g00121 Petunia axillaris HOM05D004035 ORTHO05D004631 1.1e-141 507.3 417 67.4
DCAR_025943 Daucus carota HOM05D004035 ORTHO05D004631 1.5e-141 506.9 420 66.4
HanXRQChr09g0261471 Helianthus annuus HOM05D004035 ORTHO05D004631 3.3e-141 505.8 418 64.8
Haze_15090 Corylus avellana HOM05D004035 ORTHO05D004631 7.3e-141 504.6 417 67.6
Nitab4.5_0001385g0050 Nicotiana tabacum HOM05D004035 ORTHO05D004631 1.6e-140 503.4 417 67.4
Os03g0715500 Oryza sativa ssp. japonica HOM05D004035 ORTHO05D004631 2.9e-137 492.7 415 62.7
Ca_22265_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 8.3e-137 491.1 419 65.2
Zm00001eb055180 Zea mays HOM05D004035 ORTHO05D004631 1.8e-136 490.0 415 62.2
ATR0743G236 Amborella trichopoda HOM05D004035 ORTHO05D004631 9.2e-136 487.6 422 62.3
vmacro11086 Vaccinium macrocarpon HOM05D004035 ORTHO05D004631 1.6e-135 486.9 490 58.4
SalBow8G0583 Salvia bowleyana HOM05D004035 ORTHO05D004631 1.6e-132 476.9 417 62.1
PSO837G0008 Papaver somniferum HOM05D004035 ORTHO05D004631 3.1e-131 472.6 415 62.4
PSO017G4184 Papaver somniferum HOM05D004035 ORTHO05D004631 1.2e-130 470.7 415 61.4
BcaB03g12382 Brassica carinata HOM05D004035 ORTHO05D004631 3.7e-129 465.7 324 72.5
BcaC01g00456 Brassica carinata HOM05D004035 ORTHO05D004631 6.0e-127 458.4 415 62.2
CDE09G0689 Ceratophyllum demersum HOM05D004035 ORTHO05D004631 1.5e-125 453.8 412 60.4
Oeu042265.1 Olea europaea HOM05D004035 ORTHO05D004631 4.4e-122 442.2 349 65.3
A08p22280 Brassica napus HOM05D004035 ORTHO05D004631 3.2e-120 436.0 415 58.6
Lsat_1_v5_gn_4_152080 Lactuca sativa HOM05D004035 ORTHO05D004631 2.3e-118 429.9 418 59.6
CsaV3_4G004990 Cucumis sativus L. HOM05D004035 ORTHO05D004631 2.6e-114 416.4 297 77.1
MBI07_g11484_MAGBIO Magnolia biondii HOM05D004035 ORTHO05D004631 1.7e-110 403.7 321 69.2
Oeu033646.1 Olea europaea HOM05D004035 ORTHO05D004631 6.6e-102 375.2 418 53.3
unitig_52.g17587 Utricularia gibba HOM05D004035 ORTHO05D004631 2.2e-97 360.1 304 65.1
Mapoly0160s0027 Marchantia polymorpha HOM05D004035 ORTHO05D004631 8.7e-94 348.2 423 46.1
TPR.G13573 Trifolium pratense HOM05D004035 ORTHO05D004631 1.5e-93 347.4 270 71.1
CAN.G358.86 Capsicum annuum HOM05D004035 ORTHO05D004631 7.4e-93 345.1 274 69.7
SHI32099 Sapria himalayana HOM05D004035 ORTHO05D004631 5.3e-91 339.0 273 64.8
Pp3c10_5300 Physcomitrium patens HOM05D004035 ORTHO05D004631 2.7e-87 326.6 431 44.1
SMO145G0075 Selaginella moellendorffii HOM05D004035 ORTHO05D004631 9.0e-83 311.6 419 43.0
BolC3t20256H Brassica oleracea HOM05D004035 ORTHO05D004631 1.5e-74 284.3 183 77.6
PGSC0003DMG400003507 Solanum tuberosum HOM05D004035 ORTHO05D004631 1.4e-67 261.2 221 67.0
HPP92_004246 Vanilla planifolia HOM05D004035 ORTHO05D004631 1.0e-57 228.4 166 68.7
CBR_g34968 Chara braunii HOM05D004035 ORTHO05D004631 3.2e-56 223.4 505 33.3
Hund16431 Selenicereus undatus HOM05D004035 ORTHO05D004631 1.5e-53 214.5 148 68.9
BolC3t20257H Brassica oleracea HOM05D004035 ORTHO05D004631 1.4e-43 181.4 154 65.6
CsaV3_4G005000 Cucumis sativus L. HOM05D004035 ORTHO05D004631 3.6e-39 166.8 97 78.4
SEGI_13313 Sequoiadendron giganteum HOM05D004035 ORTHO05D004631 2.3e-33 147.5 221 45.2
TPR.G13579 Trifolium pratense HOM05D004035 ORTHO05D004631 9.8e-29 132.1 99 69.7
Lsat_1_v5_gn_8_105180 Lactuca sativa HOM05D004035 ORTHO05D004631 4.1e-27 126.7 213 46.0
SHI32097 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-27 126.7 121 60.3
Oeu042264.1 Olea europaea HOM05D004035 ORTHO05D004631 7.8e-26 122.5 86 73.3
Duzib264G0986 Durio zibethinus HOM05D004035 ORTHO05D004631 8.6e-25 119.0 96 67.7
AagrBONN_evm.TU.Sc2ySwM_340.480 Anthoceros agrestis HOM05D004035 ORTHO05D004631 5.7e-21 106.3 227 37.9
PRCOL_00006719 Prasinoderma coloniale HOM05D004035 ORTHO05D004631 2.2e-20 104.4 431 26.2
Cpa.g.sc202.3 Carica papaya HOM05D004035 ORTHO05D004631 7.0e-19 99.4 52 86.5
MBI07_g05961_MAGBIO Magnolia biondii HOM05D000455 ORTHO05D000434 2.0e-18 97.8 52 82.7
SEGI_00418 Sequoiadendron giganteum HOM05D004035 ORTHO05D004631 1.4e-14 85.1 53 67.9
Oeu009413.1 Olea europaea HOM05D004035 ORTHO05D004631 2.0e-13 81.3 98 50.0


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