Gene: HanXRQChr16g0530441

General Information

Structural Information

  • Species Helianthus annuus
  • Gene Identifier HanXRQChr16g0530441
  • Transcript Identifier HanXRQChr16g0530441.r1.2.494
  • Gene Type Coding gene
  • Location HanXRQChr16 : 175610048-175615548 : negative

Gene Family Information

  • ID HOM05D004035
  • #Genes/#Species 174/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id HanXRQChr16g0530441.r1.2
  • pacid 40299092

Descriptions

  • Description Probable vacuolar sorting protein 39
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT4G36630
GO:0006886
ISO
PLAZA Homology (enrichment)intracellular protein transport HOM05D004035

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G36630

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT4G36630
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G36630
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G36630
GO:0030897
ISO
PLAZA Integrative OrthologyHOPS complex AT4G36630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032914 Vam6/VPS39/TRAP1 family
IPR019453 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2
IPR019452 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1
IPR001180 Citron homology (CNH) domain
Mapman id Description
22.3.4.9.5 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.HOPS-specific component VPS39