Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G1811 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 0.0e+00 1347.4 705 100.0
TWI12G0239 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 0.0e+00 1178.3 712 87.9
TWI18G0079 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 0.0e+00 1157.1 714 86.3
GSVIVG01017039001 Vitis vinifera HOM05D003995 ORTHO05D004800 1.3e-262 909.8 707 68.7
Thecc.06G096000 Theobroma cacao HOM05D003995 ORTHO05D004800 5.5e-258 894.4 708 68.4
CiPaw.02G147500 Carya illinoinensis HOM05D003995 ORTHO05D004800 2.7e-257 892.1 706 67.7
Cfa002115 Carpinus fangiana HOM05D003995 ORTHO05D004800 6.8e-256 887.5 705 67.9
Manes.04G131700 Manihot esculenta HOM05D003995 ORTHO05D004800 3.4e-255 885.2 708 66.9
QL05p021104 Quercus lobata HOM05D003995 ORTHO05D004800 7.5e-255 884.0 708 67.1
Manes.11G036200 Manihot esculenta HOM05D003995 ORTHO05D004800 2.8e-254 882.1 725 65.2
Potri.001G187000 Populus trichocarpa HOM05D003995 ORTHO05D004800 6.3e-254 880.9 706 66.6
COL.COLO4_30474 Corchorus olitorius HOM05D003995 ORTHO05D004800 2.4e-253 879.0 708 67.5
Haze_16334 Corylus avellana HOM05D003995 ORTHO05D004800 1.6e-249 866.3 722 65.9
Gohir.A02G119100 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.6e-247 859.0 707 66.5
Gohir.D03G059900 Gossypium hirsutum HOM05D003995 ORTHO05D004800 3.4e-247 858.6 707 66.9
Ciclev10027380m.g Citrus clementina HOM05D003995 ORTHO05D004800 1.3e-246 856.7 731 64.7
MD09G1207100 Malus domestica HOM05D003995 ORTHO05D004800 3.7e-246 855.1 708 65.0
Gorai.009G136200 Gossypium raimondii HOM05D003995 ORTHO05D004800 2.4e-245 852.4 707 65.5
Prupe.3G063200 Prunus persica HOM05D003995 ORTHO05D004800 3.1e-245 852.0 706 65.0
TAR624G1104 Trochodendron aralioides HOM05D003995 ORTHO05D004800 3.1e-245 852.0 713 66.1
Gohir.A05G128000 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.2e-244 850.1 707 65.1
Gohir.D05G132500 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.0e-243 847.0 707 65.3
Gorai.003G063800 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.3e-243 846.7 703 66.4
CiPaw.01G233700 Carya illinoinensis HOM05D003995 ORTHO05D004800 1.7e-243 846.3 707 65.8
Atru.chr1.3467 Acer truncatum HOM05D003995 ORTHO05D004800 3.8e-243 845.1 696 66.2
Duzib235G0154 Durio zibethinus HOM05D003995 ORTHO05D004800 1.2e-241 840.1 692 65.9
FvH4_6g32000 Fragaria vesca HOM05D003995 ORTHO05D004800 2.3e-240 835.9 705 63.8
Actinidia21699 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.0e-239 832.8 707 63.9
CANSAT56G4226 Cannabis sativa HOM05D003995 ORTHO05D004800 7.5e-239 830.9 705 64.4
Cpa.g.sc109.33 Carica papaya HOM05D003995 ORTHO05D004800 7.5e-239 830.9 702 64.0
TAR102G0002 Trochodendron aralioides HOM05D003995 ORTHO05D004800 4.9e-238 828.2 715 64.3
CSS0043166 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 1.2e-236 823.5 706 63.5
FAN05G2434 Fragaria x ananassa HOM05D003995 ORTHO05D004800 3.5e-236 822.0 724 62.2
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 3.5e-236 822.0 706 64.2
Dinv30461 Davidia involucrata HOM05D003995 ORTHO05D004800 2.3e-235 819.3 705 64.0
Lj3g0012728 Lotus japonicus HOM05D003995 ORTHO05D004800 5.0e-235 818.1 708 63.1
CSS0042187 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 6.6e-235 817.8 706 63.5
MD17G1187800 Malus domestica HOM05D003995 ORTHO05D004800 2.5e-234 815.8 714 62.5
Dinv38000 Davidia involucrata HOM05D003995 ORTHO05D004800 5.6e-234 814.7 694 64.6
Glyma.07G017700 Glycine max HOM05D003995 ORTHO05D004800 4.7e-233 811.6 711 63.3
VMungo0331G0049 Vigna mungo HOM05D003995 ORTHO05D004800 4.7e-233 811.6 707 62.9
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 2.3e-232 809.3 706 63.3
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea HOM05D003995 ORTHO05D004800 1.1e-229 800.4 710 61.1
FAN14G0476 Fragaria x ananassa HOM05D003995 ORTHO05D004800 3.2e-229 798.9 705 61.8
Phvul.010G147000 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 2.3e-227 792.7 710 61.5
Ca_11524_v3 Cicer arietinum L. HOM05D003995 ORTHO05D004800 9.5e-226 787.3 713 61.2
Sc12g0009570 Simmondsia chinensis HOM05D003995 ORTHO05D004800 1.6e-225 786.6 705 60.3
Peaxi162Scf00090g00073 Petunia axillaris HOM05D003995 ORTHO05D004800 6.2e-225 784.6 705 61.4
Cc00_g10390 Coffea canephora HOM05D003995 ORTHO05D004800 1.8e-224 783.1 705 61.3
Medtr8g013720 Medicago truncatula HOM05D003995 ORTHO05D004800 2.3e-224 782.7 717 60.5
TPR.G14825 Trifolium pratense HOM05D003995 ORTHO05D004800 6.8e-224 781.2 718 60.2
Eucgr.F03056 Eucalyptus grandis HOM05D003995 ORTHO05D004800 8.9e-224 780.8 705 60.7
Lalb_Chr01g0013091 Lupinus albus HOM05D003995 ORTHO05D004800 8.9e-224 780.8 701 61.6
PGR102G1287 Punica granatum HOM05D003995 ORTHO05D004800 8.9e-224 780.8 708 60.9
FAN02G0974 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.2e-223 780.4 706 60.6
Lalb_Chr25g0280081 Lupinus albus HOM05D003995 ORTHO05D004800 2.9e-222 775.8 703 61.7
Gorai.010G229800 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.4e-221 773.5 707 61.5
FAN09G2208 Fragaria x ananassa HOM05D003995 ORTHO05D004800 4.1e-221 771.9 706 60.6
Psat4g198440 Pisum sativum HOM05D003995 ORTHO05D004800 4.1e-221 771.9 721 59.6
Gohir.D06G197450 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.2e-220 770.4 707 61.4
Oeu050081.1 Olea europaea HOM05D003995 ORTHO05D004800 1.3e-219 766.9 706 60.2
Nitab4.5_0002549g0020 Nicotiana tabacum HOM05D003995 ORTHO05D004800 1.7e-219 766.5 704 59.5
PGR102G1422 Punica granatum HOM05D003995 ORTHO05D004800 1.7e-219 766.5 709 60.8
Aqoxy7G01498 Aquilegia oxysepala HOM05D003995 ORTHO05D004800 1.9e-218 763.1 710 60.6
Eucgr.J02949 Eucalyptus grandis HOM05D003995 ORTHO05D004800 1.2e-217 760.4 708 60.3
CSS0032416 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 3.6e-217 758.8 704 60.5
Oeu017626.1 Olea europaea HOM05D003995 ORTHO05D004800 3.1e-216 755.7 706 59.8
PSO210G6397 Papaver somniferum HOM05D003995 ORTHO05D004800 5.8e-215 751.5 723 59.1
PSO210G6330 Papaver somniferum HOM05D003995 ORTHO05D004800 8.4e-214 747.7 725 58.8
EL10Ac9g22110 Beta vulgaris HOM05D003995 ORTHO05D004800 1.2e-212 743.8 705 58.7
DCAR_019957 Daucus carota HOM05D003995 ORTHO05D004800 2.7e-212 742.7 705 58.7
CAN.G60.5 Capsicum annuum HOM05D003995 ORTHO05D004800 4.6e-212 741.9 705 58.7
Hund06648 Selenicereus undatus HOM05D003995 ORTHO05D004800 1.7e-211 740.0 707 58.7
Glyma.08G202900 Glycine max HOM05D003995 ORTHO05D004800 5.1e-211 738.4 708 59.2
THA.LOC104817968 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 1.2e-209 733.8 706 59.2
Migut.H00960 Erythranthe guttata HOM05D003995 ORTHO05D004800 2.4e-208 729.6 709 58.1
Sed0011470 Sechium edule HOM05D003995 ORTHO05D004800 4.0e-208 728.8 713 58.3
PGSC0003DMG400008535 Solanum tuberosum HOM05D003995 ORTHO05D004800 8.9e-208 727.6 710 57.7
CsaV3_3G023750 Cucumis sativus L. HOM05D003995 ORTHO05D004800 1.5e-207 726.9 710 58.6
THA.LOC104810534 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 4.4e-207 725.3 710 57.9
MSTRG.23509 Avicennia marina HOM05D003995 ORTHO05D004800 5.4e-205 718.4 707 56.7
AUR62031875 Chenopodium quinoa HOM05D003995 ORTHO05D004800 7.1e-205 718.0 705 56.9
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 1.6e-204 716.8 721 57.0
Glyma.13G355800 Glycine max HOM05D003995 ORTHO05D004800 5.6e-202 708.4 714 56.6
Sp3g14640 Schrenkiella parvula HOM05D003995 ORTHO05D004800 5.6e-202 708.4 710 57.5
BcaC05g28900 Brassica carinata HOM05D003995 ORTHO05D004800 9.6e-202 707.6 706 57.2
BolC5t33775H Brassica oleracea HOM05D003995 ORTHO05D004800 9.6e-202 707.6 706 57.2
Aa31LG8G3420 Aethionema arabicum HOM05D003995 ORTHO05D004800 2.8e-201 706.1 715 57.5
Nitab4.5_0004354g0010 Nicotiana tabacum HOM05D003995 ORTHO05D004800 2.8e-201 706.1 862 49.3
BraA05t22150Z Brassica rapa HOM05D003995 ORTHO05D004800 3.6e-201 705.7 706 57.4
AL3G29010 Arabidopsis lyrata HOM05D003995 ORTHO05D004800 6.2e-201 704.9 709 57.3
AT3G16270 Arabidopsis thaliana HOM05D003995 ORTHO05D004800 6.2e-201 704.9 712 57.4
Thhalv10020187m.g Eutrema salsugineum HOM05D003995 ORTHO05D004800 1.8e-200 703.4 708 56.1
Rhsim08G0225700 Rhododendron simsii HOM05D003995 ORTHO05D004800 9.0e-200 701.0 709 56.6
A05p33250 Brassica napus HOM05D003995 ORTHO05D004800 2.6e-199 699.5 706 56.7
CARHR091480 Cardamine hirsuta HOM05D003995 ORTHO05D004800 5.8e-199 698.4 708 56.6
Sed0003559 Sechium edule HOM05D003995 ORTHO05D004800 9.9e-199 697.6 713 58.6
Sopen04g017970 Solanum pennellii HOM05D003995 ORTHO05D004800 9.9e-199 697.6 707 56.6
Carub.0003s1602 Capsella rubella HOM05D003995 ORTHO05D004800 1.7e-198 696.8 709 57.0
Solyc04g047770.3 Solanum lycopersicum HOM05D003995 ORTHO05D004800 2.9e-198 696.0 707 56.6
BcaB06g25717 Brassica carinata HOM05D003995 ORTHO05D004800 4.9e-198 695.3 707 56.2
AUR62022169 Chenopodium quinoa HOM05D003995 ORTHO05D004800 8.4e-198 694.5 705 55.9
C05p50240 Brassica napus HOM05D003995 ORTHO05D004800 1.1e-197 694.1 706 56.9
Ah.01g005620 Amaranthus hybridus HOM05D003995 ORTHO05D004800 6.2e-193 678.3 711 55.1
SGA_v2.0_scaffold44G16540 Striga asiatica HOM05D003995 ORTHO05D004800 1.2e-191 674.1 725 54.8
VMungo1080G0563 Vigna mungo HOM05D003995 ORTHO05D004800 5.8e-191 671.8 706 55.5
ATR0705G117 Amborella trichopoda HOM05D003995 ORTHO05D004800 7.6e-191 671.4 723 55.7
Lsat_1_v5_gn_2_39201 Lactuca sativa HOM05D003995 ORTHO05D004800 1.1e-186 657.5 722 54.6
Nn2g11632 Nelumbo nucifera HOM05D003995 ORTHO05D004800 2.5e-186 656.4 713 55.1
CDE02G3541 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 1.4e-184 650.6 711 52.0
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 5.3e-184 648.7 699 54.6
CDE08G1118 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 5.3e-184 648.7 708 52.7
Phvul.005G170500 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 7.6e-183 644.8 713 53.0
SalBow1G2060 Salvia bowleyana HOM05D003995 ORTHO05D004800 5.5e-181 638.6 744 50.7
HanXRQChr14g0434431 Helianthus annuus HOM05D003995 ORTHO05D004800 5.7e-178 628.6 713 54.3
Os01g0232400 Oryza sativa ssp. japonica HOM05D003995 ORTHO05D004800 2.0e-175 620.2 715 52.7
Zm00001eb339300 Zea mays HOM05D003995 ORTHO05D004800 2.0e-175 620.2 712 53.2
MELO3C012986.2 Cucumis melo HOM05D003995 ORTHO05D004800 1.2e-172 610.9 641 55.5
HanXRQChr01g0017801 Helianthus annuus HOM05D003995 ORTHO05D004800 2.3e-171 606.7 711 52.5
SHI11063 Sapria himalayana HOM05D003995 ORTHO05D004800 8.7e-171 604.7 697 52.8
ECA248G2833 Erigeron canadensis HOM05D003995 ORTHO05D004800 6.3e-169 598.6 695 51.8
Zm00001eb119170 Zea mays HOM05D003995 ORTHO05D004800 1.4e-168 597.4 712 52.1
HPP92_008092 Vanilla planifolia HOM05D003995 ORTHO05D004800 4.2e-157 559.3 731 49.0
Nn3g18163 Nelumbo nucifera HOM05D003995 ORTHO05D004800 8.2e-153 545.0 382 75.4
QL04p048641 Quercus lobata HOM05D003995 ORTHO05D004800 1.1e-144 518.1 607 49.6
Gohir.A06G188875 Gossypium hirsutum HOM05D003995 ORTHO05D004800 6.5e-142 508.8 373 72.7
MBI01_g24453_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.1e-141 508.1 699 46.8
SEGI_23305 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 3.5e-135 486.5 730 43.4
SalBow1G1048 Salvia bowleyana HOM05D003995 ORTHO05D004800 4.2e-133 479.6 375 65.6
SalBow1G5856 Salvia bowleyana HOM05D003995 ORTHO05D004800 4.2e-133 479.6 375 65.6
Lj4A820G41 Lonicera japonica HOM05D003995 ORTHO05D004800 9.5e-133 478.4 549 53.6
RcHm_v2.0_Chr2g0139591 Rosa chinensis HOM05D003995 ORTHO05D004800 1.5e-130 471.1 319 78.4
vmacro18871 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 2.9e-126 456.8 321 75.4
Sabra01G0153300 Salix brachista HOM05D003995 ORTHO05D004800 8.1e-108 395.6 388 57.0
RcHm_v2.0_Chr2g0139601 Rosa chinensis HOM05D003995 ORTHO05D004800 6.0e-103 379.4 387 53.7
Hund00665 Selenicereus undatus HOM05D003995 ORTHO05D004800 1.1e-99 368.6 479 46.1
Mapoly0022s0096 Marchantia polymorpha HOM05D003995 ORTHO05D004800 7.6e-98 362.5 746 37.4
Pp3c2_17390 Physcomitrium patens HOM05D003995 ORTHO05D004800 4.1e-96 356.7 739 38.7
SMO340G0180 Selaginella moellendorffii HOM05D003995 ORTHO05D004800 1.0e-94 352.1 721 38.0
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis HOM05D003995 ORTHO05D004800 2.3e-94 350.9 792 35.7
MBI01_g39826_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 2.1e-92 344.4 629 39.0
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea HOM05D003995 ORTHO05D004800 9.9e-90 335.5 387 49.1
Actinidia39150 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.5e-66 258.5 409 46.0
CBR_g36315 Chara braunii HOM05D003995 ORTHO05D004800 2.5e-61 241.1 501 36.1
vmacro18870 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 1.3e-57 228.8 343 42.3
ClCG07G013220 Citrullus lanatus HOM05D003995 ORTHO05D004800 7.9e-55 219.5 334 44.0
Actinidia32710 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.0e-54 217.6 151 77.5
CBR_g31940 Chara braunii HOM05D003995 ORTHO05D004800 1.4e-51 208.8 516 33.5
Actinidia32709 Actinidia chinensis HOM05D003995 ORTHO05D004800 5.3e-51 206.8 345 39.7
Actinidia09000 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.9e-41 174.5 166 62.0
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 6.5e-41 173.3 293 41.3
Glyma.15G018300 Glycine max HOM05D003995 ORTHO05D004800 2.5e-40 171.4 254 44.5
CDE02G4060 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 9.4e-40 169.5 152 55.3
HanXRQChr10g0310971 Helianthus annuus HOM05D003995 ORTHO05D004800 2.8e-36 157.9 163 57.1
Cre12.g545300 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 1.1e-27 129.4 390 28.2
Cre12.g545150 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 1.0e-25 122.9 368 29.1
Lj4C820T9 Lonicera japonica HOM05D003995 ORTHO05D004800 1.7e-25 122.1 69 89.9
FAN18G0014 Fragaria x ananassa HOM05D003995 ORTHO05D004800 8.5e-25 119.8 69 84.1
PRCOL_00002233 Prasinoderma coloniale HOM05D003995 ORTHO05D004800 8.8e-22 109.8 457 27.4
Actinidia08998 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.1e-19 101.3 57 91.2
MBI07_g11499_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 3.5e-18 97.8 62 77.4
Actinidia39149 Actinidia chinensis HOM05D003995 ORTHO05D004800 7.7e-18 96.7 159 38.4
SEGI_12342 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 5.0e-17 94.0 76 57.9
FvH4_5g23151 Fragaria vesca HOM05D003995 ORTHO05D004800 2.5e-16 91.7 51 86.3
FvH4_7g32131 Fragaria vesca HOM05D003995 ORTHO05D004800 9.5e-16 89.7 51 84.3
Gohir.D03G024850 Gossypium hirsutum HOM05D003995 ORTHO05D004800 9.5e-16 89.7 95 50.5
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 2.8e-15 88.2 61 73.8
Gorai.003G083400 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.5e-13 82.4 96 47.9
Zm00001eb248030 Zea mays HOM05D002169 ORTHO05D004800 1.1e-11 76.3 101 46.5
Pp3c1_18430 Physcomitrium patens HOM05D003995 ORTHO05D004800 5.4e-11 73.9 423 26.7
MCO13G545 Micromonas commoda HOM05D003995 ORTHO05D004800 3.6e-07 61.2 383 22.7
MBI03_g21265_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.0e-06 59.7 59 52.5


User provided reference genes

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